RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 SLAQ13239 276 aa12.08□□□□□ -0.48
TSPAN4-205ENST00000397406 MRPL18Q9H0U6 180 aaKnown RBP12.08□□□□□ -0.48
TSPAN4-205ENST00000397406 DEFB4AO15263 64 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 CRYGDP07320 174 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 FABP9Q0Z7S8 132 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 FAM104BQ5XKR9 115 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 SMIM15Q7Z3B0 74 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 AMN1Q8IY45 258 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 LINC00612Q8N6U2 182 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 C14orf178Q8N769 122 aaPredicted RBP12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 SAMD10Q9BYL1 202 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 DPH3P1Q9H4G8 78 aa12.07□□□□□ -0.48
TSPAN4-205ENST00000397406 A8MWV9 139 aa12.06□□□□□ -0.48
TSPAN4-205ENST00000397406 PHOX2AO14813 284 aa12.06□□□□□ -0.48
TSPAN4-205ENST00000397406 RS1O15537 224 aa12.06□□□□□ -0.48
TSPAN4-205ENST00000397406 TRGC2P03986 189 aa12.06□□□□□ -0.48
TSPAN4-205ENST00000397406 LINC00315P59091 139 aa12.06□□□□□ -0.48
TSPAN4-205ENST00000397406 FRZBQ92765 325 aa12.06□□□□□ -0.48
TSPAN4-205ENST00000397406 SACSQ9NZJ4 4579 aa12.06□□□□□ -0.48
TSPAN4-205ENST00000397406 STARD9Q9P2P6 4700 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 A0A087WWL8 130 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 GAGE12BA1L429 117 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 LYRM9A8MSI8 78 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 GAGE7O76087 117 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 APCSP02743 223 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 RAB4AP20338 218 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 CFAP126Q5VTH2 177 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 POM121L12Q8N7R1 296 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 DKK2Q9UBU2 259 aa12.05□□□□□ -0.48
TSPAN4-205ENST00000397406 CSMD3Q7Z407 3707 aa12.04□□□□□ -0.48
TSPAN4-205ENST00000397406 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
TSPAN4-205ENST00000397406 CASC10Q5T4H9 136 aa12.04□□□□□ -0.48
TSPAN4-205ENST00000397406 UFSP1Q6NVU6 142 aa12.04□□□□□ -0.48
TSPAN4-205ENST00000397406 MUC7Q8TAX7 377 aa12.04□□□□□ -0.48
TSPAN4-205ENST00000397406 C11orf68Q9H3H3 251 aaKnown RBP12.04□□□□□ -0.48
TSPAN4-205ENST00000397406 EDA2RQ9HAV5 297 aa12.04□□□□□ -0.48
TSPAN4-205ENST00000397406 C3orf84H3BNL1 204 aa12.03□□□□□ -0.48
TSPAN4-205ENST00000397406 SMIM17P0DL12 118 aa12.03□□□□□ -0.48
TSPAN4-205ENST00000397406 KIAA1644Q3SXP7 199 aa12.03□□□□□ -0.48
TSPAN4-205ENST00000397406 CELA1Q9UNI1 258 aa12.03□□□□□ -0.48
TSPAN4-205ENST00000397406 RYR2Q92736 4967 aa12.03□□□□□ -0.48
TSPAN4-205ENST00000397406 TRAV4A0A0B4J268 109 aa12.03□□□□□ -0.48
TSPAN4-205ENST00000397406 FAM74A4Q5TZK3 123 aa12.03□□□□□ -0.48
TSPAN4-205ENST00000397406 C18orf15Q96N68 181 aa12.03□□□□□ -0.48
TSPAN4-205ENST00000397406 TENM2Q9NT68 2774 aa12.02□□□□□ -0.49
TSPAN4-205ENST00000397406 MGPP08493 103 aa12.02□□□□□ -0.49
TSPAN4-205ENST00000397406 ZMAT4Q9H898 229 aa12.02□□□□□ -0.49
TSPAN4-205ENST00000397406 TRGV2A0A075B6R0 118 aa12.01□□□□□ -0.49
TSPAN4-205ENST00000397406 RHODO00212 210 aa12.01□□□□□ -0.49
TSPAN4-205ENST00000397406 SPART-AS1P0CW21 52 aa12.01□□□□□ -0.49
TSPAN4-205ENST00000397406 DEFB130BP0DP73 79 aa12.01□□□□□ -0.49
TSPAN4-205ENST00000397406 DEFB130AP0DP74 79 aa12.01□□□□□ -0.49
TSPAN4-205ENST00000397406 ZFP2Q6ZN57 461 aa12.01□□□□□ -0.49
TSPAN4-205ENST00000397406 OR4C5Q8NGB2 326 aa12.01□□□□□ -0.49
TSPAN4-205ENST00000397406 TRAV26-2A0A0B4J265 109 aa12□□□□□ -0.49
TSPAN4-205ENST00000397406 GAS8-AS1O95177 125 aa12□□□□□ -0.49
TSPAN4-205ENST00000397406 ZNF479Q96JC4 524 aa12□□□□□ -0.49
TSPAN4-205ENST00000397406 IGHV3-73A0A0B4J1V6 119 aa11.99□□□□□ -0.49
TSPAN4-205ENST00000397406 A0A0J9YWU9 116 aa11.99□□□□□ -0.49
TSPAN4-205ENST00000397406 C1orf196B1AJZ1 125 aa11.99□□□□□ -0.49
TSPAN4-205ENST00000397406 D6R8Y8 96 aa11.99□□□□□ -0.49
TSPAN4-205ENST00000397406 SMKR1H3BMG3 65 aa11.99□□□□□ -0.49
TSPAN4-205ENST00000397406 ZNF56Q15929 161 aa11.99□□□□□ -0.49
TSPAN4-205ENST00000397406 SUMO4Q6EEV6 95 aa11.99□□□□□ -0.49
TSPAN4-205ENST00000397406 MRAP2Q96G30 205 aa11.99□□□□□ -0.49
TSPAN4-205ENST00000397406 ALKBH7Q9BT30 221 aaPredicted RBP11.99□□□□□ -0.49
TSPAN4-205ENST00000397406 TEX48A0A1B0GUV7 120 aa11.98□□□□□ -0.49
TSPAN4-205ENST00000397406 NCR2O95944 276 aa11.98□□□□□ -0.49
TSPAN4-205ENST00000397406 IGHV3-53P01767 116 aa11.98□□□□□ -0.49
TSPAN4-205ENST00000397406 SRIP30626 198 aa11.98□□□□□ -0.49
TSPAN4-205ENST00000397406 DAD1P61803 113 aa11.98□□□□□ -0.49
TSPAN4-205ENST00000397406 ORMDL3Q8N138 153 aa11.98□□□□□ -0.49
TSPAN4-205ENST00000397406 F5H697 171 aa11.97□□□□□ -0.49
TSPAN4-205ENST00000397406 CIDEAO60543 219 aa11.97□□□□□ -0.49
TSPAN4-205ENST00000397406 PPBPP02775 128 aa11.97□□□□□ -0.49
TSPAN4-205ENST00000397406 GATA1P15976 413 aaPredicted RBP11.97□□□□□ -0.49
TSPAN4-205ENST00000397406 CKS2P33552 79 aa11.97□□□□□ -0.49
TSPAN4-205ENST00000397406 ZFAND6Q6FIF0 208 aa11.97□□□□□ -0.49
TSPAN4-205ENST00000397406 Q6ZSN1 163 aa11.97□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST1H2BKO60814 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST1H2BJP06899 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST1H2BOP23527 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST1H2BBP33778 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST1H2BDP58876 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST1H2BCP62807 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST2H2BEQ16778 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST1H2BHQ93079 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 PRELID3AQ96N28 172 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST1H2BNQ99877 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 HIST1H2BMQ99879 126 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 LYSTQ99698 3801 aa11.96□□□□□ -0.49
TSPAN4-205ENST00000397406 M0QY20 66 aa11.95□□□□□ -0.5
TSPAN4-205ENST00000397406 C12orf74Q32Q52 190 aa11.95□□□□□ -0.5
TSPAN4-205ENST00000397406 NRACQ8N912 160 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms