RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ZNF256Q9Y2P7 627 aaPredicted RBP2.59□□□□□ -1.99
VPS13C-203ENST00000395896 APOMO95445 188 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 ZNF503Q96F45 646 aa2.59□□□□□ -1.99
VPS13C-203ENST00000395896 PLA2G2AP14555 144 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 Q1RN00 199 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 MRPL36Q9P0J6 103 aaKnown RBP2.59□□□□□ -2
VPS13C-203ENST00000395896 TRBV25-1A0A075B6N4 114 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 C3orf79P0CE67 100 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 TMEM61Q8N0U2 210 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 IGHV4-4A0A075B6R2 117 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 IGHV4OR15-8A0A075B7B6 117 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 A0A087WW49 117 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 TRAV8-6A0A0B4J262 113 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 GAGE10A6NGK3 116 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 TRBV7-3A0A075B6L6 115 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 ZC2HC1BQ5TFG8 222 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 ZFP2Q6ZN57 461 aa2.59□□□□□ -2
VPS13C-203ENST00000395896 DMBT1Q9UGM3 2413 aaPredicted RBP2.59□□□□□ -2
VPS13C-203ENST00000395896 OVOL2Q9BRP0 275 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 KLK15Q9H2R5 256 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 U3KQE9 123 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 KIR2DL5BA0A0G2JN68 375 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 KIR2DL5BA0A0G2JPC4 375 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 A0A1W2PPR1 153 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 KLLNB2CW77 178 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 ZNF25P17030 456 aaPredicted RBP2.58□□□□□ -2
VPS13C-203ENST00000395896 KIR2DL5AQ8N109 375 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 KIR2DL5BQ8NHK3 375 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 RAB37Q96AX2 223 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 PLA2G2EQ9NZK7 142 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 NDUFA7O95182 113 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 TRBV20-1A0A075B6N2 111 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 FBN1P35555 2871 aaKnown RBP2.58□□□□□ -2
VPS13C-203ENST00000395896 CSTL1Q9H114 145 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 IGHV1-24A0A0C4DH33 117 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 PRB1P04280 392 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 DEFB125Q8N687 156 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 SMIM13P0DJ93 91 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 DNAJC9-AS1A6NH13 148 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 AZU1P20160 251 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 PSMB2P49721 201 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 CDSNQ15517 529 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 TAL2Q16559 108 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 ZNF747Q9BV97 191 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 TRAV12-1A0A0B4J245 112 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 DLEU1O43261 78 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 HERVK_113P63121 156 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 GTSF1Q8WW33 167 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 A0A1W2PRX2 142 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 H7C423 109 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 CFHR3Q02985 330 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 MRPL51Q4U2R6 128 aaKnown RBP2.58□□□□□ -2
VPS13C-203ENST00000395896 C1orf229Q6ZS94 237 aaPredicted RBP2.58□□□□□ -2
VPS13C-203ENST00000395896 PRO1933Q9H354 126 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 SNAI2O43623 268 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 CTAG1AP78358 180 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 UNQ9165/PRO28630Q6UXU0 137 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 WFDC11Q8NEX6 87 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 CHCHD5Q9BSY4 110 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 ASPHD1Q5U4P2 390 aa2.58□□□□□ -2
VPS13C-203ENST00000395896 CD28P10747 220 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 CRPP02741 224 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 ERCC8Q13216 396 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 ANXA2RQ3ZCQ2 193 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 GFI1BQ5VTD9 330 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 LURAP1LQ8IV03 231 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 MAPK1IP1LQ8NDC0 245 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 TENM3Q9P273 2699 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 IGLC6P0CF74 106 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 VWFP04275 2813 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 TRBV27A0A0K0K1C4 114 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 MYMXA0A1B0GTQ4 84 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 C21orf62-AS1Q17RA5 79 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 DCANP1Q8TF63 244 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 ADARB2-AS1A8MUL3 147 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 COX8AP10176 69 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 C11orf44Q8N8P7 122 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 MALP21145 153 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 MEIG1Q5JSS6 88 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 SHISA2Q6UWI4 295 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 C14orf144Q96I85 54 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 TGP01266 2768 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 H3BMM0 161 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 SPART-AS1P0CW21 52 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 DEFB114Q30KQ6 69 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 Q8N2B8 174 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 ZFAND2AQ8N6M9 145 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 PIFOQ8TCI5 191 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 MRPL16Q9NX20 251 aaKnown RBP2.57□□□□□ -2
VPS13C-203ENST00000395896 XCL2Q9UBD3 114 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 SS18Q15532 418 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 MORN5Q5VZ52 161 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 MUC7Q8TAX7 377 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 SVEP1Q4LDE5 3571 aa2.57□□□□□ -2
VPS13C-203ENST00000395896 YPEL4Q96NS1 127 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 ZMAT4Q9H898 229 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 LYRM9A8MSI8 78 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 CHAC1Q9BUX1 264 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 ZNF815PA8K554 130 aa2.56□□□□□ -2
VPS13C-203ENST00000395896 CD300EQ496F6 205 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms