RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 IGLV2-18A0A075B6J9 118 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 TRAV12-2A0A075B6T6 113 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 IGHV1OR15-1A0A075B7D0 117 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 KNCNA6PVL3 124 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 M0R381 172 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 AP1S3Q96PC3 154 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 TMEM70Q9BUB7 260 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 HSPB8Q9UJY1 196 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 KIF25-AS1Q9Y6Z4 181 aa11.07□□□□□ -0.64
SCAF11-204ENST00000395454 IGKV3-20P01619 116 aa11.06□□□□□ -0.64
SCAF11-204ENST00000395454 ODF3L2Q3SX64 289 aa11.06□□□□□ -0.64
SCAF11-204ENST00000395454 C20orf144Q9BQM9 153 aa11.06□□□□□ -0.64
SCAF11-204ENST00000395454 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 LINC00315P59091 139 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 SPATA12Q7Z6I5 190 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 LINC00467Q9BRT7 94 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 OR11H12B2RN74 326 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 RBMY1A1P0DJD3 496 aaKnown RBP11.05□□□□□ -0.64
SCAF11-204ENST00000395454 RBMY1CP0DJD4 496 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 DDTP30046 118 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 RBMY1FQ15415 496 aaKnown RBP11.05□□□□□ -0.64
SCAF11-204ENST00000395454 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 Q8N1Y9 231 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 PRO1933Q9H354 126 aa11.05□□□□□ -0.64
SCAF11-204ENST00000395454 LOC389332A0A1B0GUA5 103 aa11.04□□□□□ -0.64
SCAF11-204ENST00000395454 GATA1P15976 413 aaPredicted RBP11.04□□□□□ -0.64
SCAF11-204ENST00000395454 Q8N8P6 123 aa11.04□□□□□ -0.64
SCAF11-204ENST00000395454 WFDC10AQ9H1F0 79 aa11.04□□□□□ -0.64
SCAF11-204ENST00000395454 TIMM8BQ9Y5J9 83 aaPredicted RBP11.04□□□□□ -0.64
SCAF11-204ENST00000395454 HBDP02042 147 aa11.03□□□□□ -0.64
SCAF11-204ENST00000395454 PRB2P02812 416 aaPredicted RBP11.03□□□□□ -0.64
SCAF11-204ENST00000395454 ZNF124Q15973 351 aa11.03□□□□□ -0.64
SCAF11-204ENST00000395454 KPRPQ5T749 579 aaPredicted RBP11.03□□□□□ -0.64
SCAF11-204ENST00000395454 PET117Q6UWS5 81 aa11.03□□□□□ -0.64
SCAF11-204ENST00000395454 VAMP8Q9BV40 100 aa11.03□□□□□ -0.64
SCAF11-204ENST00000395454 TRGV11A0A075B6L2 103 aa11.03□□□□□ -0.64
SCAF11-204ENST00000395454 C14orf178Q8N769 122 aaPredicted RBP11.03□□□□□ -0.64
SCAF11-204ENST00000395454 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
SCAF11-204ENST00000395454 C20orf78Q9BR46 151 aa11.02□□□□□ -0.65
SCAF11-204ENST00000395454 MAP1LC3CQ9BXW4 147 aa11.02□□□□□ -0.65
SCAF11-204ENST00000395454 C19orf73Q9NVV2 129 aa11.02□□□□□ -0.65
SCAF11-204ENST00000395454 MDFICQ9P1T7 246 aa11.02□□□□□ -0.65
SCAF11-204ENST00000395454 SPRY2O43597 315 aa11.01□□□□□ -0.65
SCAF11-204ENST00000395454 CMC4P56277 68 aaPredicted RBP11.01□□□□□ -0.65
SCAF11-204ENST00000395454 RASL10AQ92737 203 aa11.01□□□□□ -0.65
SCAF11-204ENST00000395454 PPP1R17O96001 155 aa11.01□□□□□ -0.65
SCAF11-204ENST00000395454 PIK3CD-AS1Q5SR53 167 aa11.01□□□□□ -0.65
SCAF11-204ENST00000395454 LINC01545Q5VT33 79 aa11.01□□□□□ -0.65
SCAF11-204ENST00000395454 PTH2Q96A98 100 aa11.01□□□□□ -0.65
SCAF11-204ENST00000395454 K7EMI3 77 aa11□□□□□ -0.65
SCAF11-204ENST00000395454 RPL32P62910 135 aaKnown RBP11□□□□□ -0.65
SCAF11-204ENST00000395454 TRPT1Q86TN4 253 aaKnown RBP11□□□□□ -0.65
SCAF11-204ENST00000395454 SYT8Q8NBV8 401 aa11□□□□□ -0.65
SCAF11-204ENST00000395454 C20orf202A1L168 122 aa10.99□□□□□ -0.65
SCAF11-204ENST00000395454 FCER1GP30273 86 aa10.99□□□□□ -0.65
SCAF11-204ENST00000395454 NDUFAF3Q9BU61 184 aa10.99□□□□□ -0.65
SCAF11-204ENST00000395454 SMIM2Q9BVW6 85 aa10.99□□□□□ -0.65
SCAF11-204ENST00000395454 SUMO2P61956 95 aaKnown RBP10.99□□□□□ -0.65
SCAF11-204ENST00000395454 PAM16Q9Y3D7 125 aa10.99□□□□□ -0.65
SCAF11-204ENST00000395454 TRAV9-2A0A087WT02 112 aa10.98□□□□□ -0.65
SCAF11-204ENST00000395454 STHQ8IWL8 128 aa10.98□□□□□ -0.65
SCAF11-204ENST00000395454 INSP01308 110 aa10.97□□□□□ -0.65
SCAF11-204ENST00000395454 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
SCAF11-204ENST00000395454 FXYD7P58549 80 aa10.97□□□□□ -0.65
SCAF11-204ENST00000395454 CBY3A6NI87 242 aa10.97□□□□□ -0.65
SCAF11-204ENST00000395454 CRYGDP07320 174 aa10.97□□□□□ -0.65
SCAF11-204ENST00000395454 SMIM17P0DL12 118 aa10.97□□□□□ -0.65
SCAF11-204ENST00000395454 EDA2RQ9HAV5 297 aa10.97□□□□□ -0.65
SCAF11-204ENST00000395454 LAGE3Q14657 143 aa10.96□□□□□ -0.65
SCAF11-204ENST00000395454 C14orf144Q96I85 54 aa10.96□□□□□ -0.65
SCAF11-204ENST00000395454 MIEN1Q9BRT3 115 aa10.96□□□□□ -0.65
SCAF11-204ENST00000395454 JPT2Q9H910 190 aa10.96□□□□□ -0.65
SCAF11-204ENST00000395454 MEGF8Q7Z7M0 2845 aa10.96□□□□□ -0.66
SCAF11-204ENST00000395454 TRBV6-5A0A0K0K1A5 114 aa10.96□□□□□ -0.66
SCAF11-204ENST00000395454 MGPP08493 103 aa10.96□□□□□ -0.66
SCAF11-204ENST00000395454 DEFA6Q01524 100 aa10.96□□□□□ -0.66
SCAF11-204ENST00000395454 LGALS9BQ3B8N2 356 aa10.96□□□□□ -0.66
SCAF11-204ENST00000395454 SPATA45Q537H7 98 aa10.96□□□□□ -0.66
SCAF11-204ENST00000395454 LGALS9CQ6DKI2 356 aa10.96□□□□□ -0.66
SCAF11-204ENST00000395454 SUMO4Q6EEV6 95 aa10.96□□□□□ -0.66
SCAF11-204ENST00000395454 C11orf72Q8NBR9 251 aa10.96□□□□□ -0.66
SCAF11-204ENST00000395454 RPL39LQ96EH5 51 aaKnown RBP10.96□□□□□ -0.66
SCAF11-204ENST00000395454 K7EIL1 84 aa10.95□□□□□ -0.66
SCAF11-204ENST00000395454 CTAG1AP78358 180 aa10.95□□□□□ -0.66
SCAF11-204ENST00000395454 IFI27L1Q96BM0 104 aa10.95□□□□□ -0.66
SCAF11-204ENST00000395454 RPL35AP18077 110 aaKnown RBP10.94□□□□□ -0.66
SCAF11-204ENST00000395454 ZNF415Q09FC8 603 aa10.94□□□□□ -0.66
SCAF11-204ENST00000395454 ZNF876PQ49A33 203 aa10.94□□□□□ -0.66
SCAF11-204ENST00000395454 DEFB121Q5J5C9 76 aa10.94□□□□□ -0.66
SCAF11-204ENST00000395454 ATOH7Q8N100 152 aa10.94□□□□□ -0.66
SCAF11-204ENST00000395454 IGLC3P0DOY3 106 aa10.94□□□□□ -0.66
SCAF11-204ENST00000395454 POLR2KP53803 58 aaKnown RBP10.94□□□□□ -0.66
SCAF11-204ENST00000395454 NACAE9PAV3 2078 aa10.93□□□□□ -0.66
SCAF11-204ENST00000395454 A0A087WWL8 130 aa10.93□□□□□ -0.66
SCAF11-204ENST00000395454 M0R2P5 195 aa10.93□□□□□ -0.66
SCAF11-204ENST00000395454 ORMDL2Q53FV1 153 aa10.93□□□□□ -0.66
SCAF11-204ENST00000395454 ZNF705AQ6ZN79 300 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-204ENST00000395454 IL17DQ8TAD2 202 aa10.93□□□□□ -0.66
SCAF11-204ENST00000395454 M0QY20 66 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms