RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LINC00299Q6ZSB3 139 aa13.7□□□□□ -0.22
TRAF4-203ENST00000394925 CXorf1O96002 111 aa13.69□□□□□ -0.22
TRAF4-203ENST00000394925 ARMS2P0C7Q2 107 aa13.69□□□□□ -0.22
TRAF4-203ENST00000394925 HNRNPA3P51991 378 aaKnown RBP13.69□□□□□ -0.22
TRAF4-203ENST00000394925 Q0VG73 95 aa13.69□□□□□ -0.22
TRAF4-203ENST00000394925 OR11H4Q8NGC9 324 aa13.69□□□□□ -0.22
TRAF4-203ENST00000394925 C1orf43Q9BWL3 253 aa13.69□□□□□ -0.22
TRAF4-203ENST00000394925 GRIFINA4D1Z8 144 aa13.68□□□□□ -0.22
TRAF4-203ENST00000394925 M0R036 132 aa13.68□□□□□ -0.22
TRAF4-203ENST00000394925 TMEM262E9PQX1 116 aa13.67□□□□□ -0.22
TRAF4-203ENST00000394925 ATP6V0CP27449 155 aa13.67□□□□□ -0.22
TRAF4-203ENST00000394925 DAZAP1Q96EP5 407 aaKnown RBP13.67□□□□□ -0.22
TRAF4-203ENST00000394925 SFRP2Q96HF1 295 aa13.67□□□□□ -0.22
TRAF4-203ENST00000394925 PSMG3Q9BT73 122 aaPredicted RBP13.67□□□□□ -0.22
TRAF4-203ENST00000394925 KRBOX1C9JBD0 128 aa13.66□□□□□ -0.22
TRAF4-203ENST00000394925 IFNA7P01567 189 aa13.66□□□□□ -0.22
TRAF4-203ENST00000394925 MBP02144 154 aa13.66□□□□□ -0.22
TRAF4-203ENST00000394925 RPL36AP83881 106 aaKnown RBP13.66□□□□□ -0.22
TRAF4-203ENST00000394925 ENHOQ6UWT2 76 aa13.66□□□□□ -0.22
TRAF4-203ENST00000394925 RPL36ALQ969Q0 106 aaKnown RBP13.66□□□□□ -0.22
TRAF4-203ENST00000394925 ACTR3CQ9C0K3 210 aaPredicted RBP13.66□□□□□ -0.22
TRAF4-203ENST00000394925 PHLDA3Q9Y5J5 127 aa13.66□□□□□ -0.22
TRAF4-203ENST00000394925 A0A1W2PRE2 83 aa13.65□□□□□ -0.22
TRAF4-203ENST00000394925 M0R381 172 aa13.65□□□□□ -0.22
TRAF4-203ENST00000394925 CRIP1P50238 77 aa13.65□□□□□ -0.22
TRAF4-203ENST00000394925 UBE2D3P61077 147 aa13.65□□□□□ -0.22
TRAF4-203ENST00000394925 UBE2D2P62837 147 aa13.65□□□□□ -0.22
TRAF4-203ENST00000394925 DNLZQ5SXM8 178 aa13.65□□□□□ -0.22
TRAF4-203ENST00000394925 Q86TA4 180 aa13.65□□□□□ -0.22
TRAF4-203ENST00000394925 CRPP02741 224 aa13.64□□□□□ -0.23
TRAF4-203ENST00000394925 SERF2P84101 59 aa13.64□□□□□ -0.23
TRAF4-203ENST00000394925 C15orf54Q8N8G6 183 aa13.64□□□□□ -0.23
TRAF4-203ENST00000394925 ZC2HC1AQ96GY0 325 aa13.64□□□□□ -0.23
TRAF4-203ENST00000394925 TRBV7-3A0A075B6L6 115 aa13.63□□□□□ -0.23
TRAF4-203ENST00000394925 TRBV10-1A0A0K0K1A3 114 aa13.63□□□□□ -0.23
TRAF4-203ENST00000394925 USP17L23D6RBM5 183 aa13.63□□□□□ -0.23
TRAF4-203ENST00000394925 PEX7O00628 323 aa13.63□□□□□ -0.23
TRAF4-203ENST00000394925 SH2D1AO60880 128 aa13.63□□□□□ -0.23
TRAF4-203ENST00000394925 TPT1P13693 172 aaKnown RBP13.63□□□□□ -0.23
TRAF4-203ENST00000394925 UBE2G2P60604 165 aa13.63□□□□□ -0.23
TRAF4-203ENST00000394925 TMSB15BA0A087X1C1 80 aa13.62□□□□□ -0.23
TRAF4-203ENST00000394925 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
TRAF4-203ENST00000394925 TNFSF18Q9UNG2 199 aa13.62□□□□□ -0.23
TRAF4-203ENST00000394925 TRBV6-8A0A0A6YYG3 113 aa13.61□□□□□ -0.23
TRAF4-203ENST00000394925 ANGP03950 147 aaKnown RBP13.61□□□□□ -0.23
TRAF4-203ENST00000394925 MPV17L2Q567V2 206 aa13.61□□□□□ -0.23
TRAF4-203ENST00000394925 PRSS1P07477 247 aa13.6□□□□□ -0.23
TRAF4-203ENST00000394925 FAM162BQ5T6X4 162 aa13.6□□□□□ -0.23
TRAF4-203ENST00000394925 ZFP82Q8N141 532 aa13.6□□□□□ -0.23
TRAF4-203ENST00000394925 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.59□□□□□ -0.23
TRAF4-203ENST00000394925 MT1HL1P0DM35 61 aa13.58□□□□□ -0.24
TRAF4-203ENST00000394925 ZNF726P1Q15940 193 aa13.58□□□□□ -0.24
TRAF4-203ENST00000394925 DGAT2L7PQ6IED9 249 aa13.58□□□□□ -0.24
TRAF4-203ENST00000394925 C9orf163Q8N9P6 203 aa13.58□□□□□ -0.24
TRAF4-203ENST00000394925 OR10G8Q8NGN5 311 aa13.58□□□□□ -0.24
TRAF4-203ENST00000394925 HIST1H2BAQ96A08 127 aa13.58□□□□□ -0.24
TRAF4-203ENST00000394925 AQP10Q96PS8 301 aa13.58□□□□□ -0.24
TRAF4-203ENST00000394925 ZFP30Q9Y2G7 519 aa13.58□□□□□ -0.24
TRAF4-203ENST00000394925 PANO1I0J062 215 aa13.57□□□□□ -0.24
TRAF4-203ENST00000394925 COX8CQ7Z4L0 72 aa13.57□□□□□ -0.24
TRAF4-203ENST00000394925 CHCHD5Q9BSY4 110 aa13.57□□□□□ -0.24
TRAF4-203ENST00000394925 FAM74A7A6NL05 159 aa13.56□□□□□ -0.24
TRAF4-203ENST00000394925 PTTG1O95997 202 aa13.56□□□□□ -0.24
TRAF4-203ENST00000394925 DEFA1P59665 94 aa13.56□□□□□ -0.24
TRAF4-203ENST00000394925 DEFA3P59666 94 aa13.56□□□□□ -0.24
TRAF4-203ENST00000394925 MIAQ16674 131 aa13.56□□□□□ -0.24
TRAF4-203ENST00000394925 LINC01559Q495D7 138 aa13.56□□□□□ -0.24
TRAF4-203ENST00000394925 NEXN-AS1Q8NBZ9 246 aa13.56□□□□□ -0.24
TRAF4-203ENST00000394925 CTXND1A0A1B0GTU2 59 aa13.55□□□□□ -0.24
TRAF4-203ENST00000394925 RAB4BP61018 213 aa13.55□□□□□ -0.24
TRAF4-203ENST00000394925 UBE2G1P62253 170 aa13.55□□□□□ -0.24
TRAF4-203ENST00000394925 ZNF56Q15929 161 aa13.55□□□□□ -0.24
TRAF4-203ENST00000394925 ZNF674Q2M3X9 581 aa13.55□□□□□ -0.24
TRAF4-203ENST00000394925 NKX6-2Q9C056 277 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-203ENST00000394925 CLPSL2Q6UWE3 100 aa13.54□□□□□ -0.24
TRAF4-203ENST00000394925 FMC1Q96HJ9 113 aa13.54□□□□□ -0.24
TRAF4-203ENST00000394925 PKIAP61925 76 aa13.53□□□□□ -0.24
TRAF4-203ENST00000394925 RPL7L1Q6DKI1 246 aaKnown RBP13.53□□□□□ -0.24
TRAF4-203ENST00000394925 SDIM1Q6ZPB5 146 aa13.53□□□□□ -0.24
TRAF4-203ENST00000394925 ALG5Q9Y673 324 aa13.53□□□□□ -0.24
TRAF4-203ENST00000394925 RPL19P84098 196 aaKnown RBP13.52□□□□□ -0.25
TRAF4-203ENST00000394925 PRR27Q6MZM9 219 aa13.52□□□□□ -0.25
TRAF4-203ENST00000394925 Q6ZRU5 148 aa13.52□□□□□ -0.25
TRAF4-203ENST00000394925 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.52□□□□□ -0.25
TRAF4-203ENST00000394925 A0A0D9SG52 128 aa13.51□□□□□ -0.25
TRAF4-203ENST00000394925 KRTAP26-1Q6PEX3 210 aa13.51□□□□□ -0.25
TRAF4-203ENST00000394925 PRR34Q9NV39 138 aa13.51□□□□□ -0.25
TRAF4-203ENST00000394925 LTAP01374 205 aa13.5□□□□□ -0.25
TRAF4-203ENST00000394925 Q5BKY6 102 aa13.5□□□□□ -0.25
TRAF4-203ENST00000394925 NTM-AS1Q6ZSK4 140 aa13.5□□□□□ -0.25
TRAF4-203ENST00000394925 LINC00269Q8N2A0 174 aa13.5□□□□□ -0.25
TRAF4-203ENST00000394925 OR10AG1Q8NH19 301 aa13.5□□□□□ -0.25
TRAF4-203ENST00000394925 BORCS7-ASMTA0A0B4J1R7 106 aa13.49□□□□□ -0.25
TRAF4-203ENST00000394925 TRBV6-1A0A0K0K1D8 114 aa13.49□□□□□ -0.25
TRAF4-203ENST00000394925 RBX1P62877 108 aa13.49□□□□□ -0.25
TRAF4-203ENST00000394925 GAGE6Q13070 117 aa13.49□□□□□ -0.25
TRAF4-203ENST00000394925 F5H697 171 aa13.48□□□□□ -0.25
TRAF4-203ENST00000394925 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
TRAF4-203ENST00000394925 INO80EQ8NBZ0 244 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-203ENST00000394925 ZNF471Q9BX82 626 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms