RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 ZNF415Q09FC8 603 aa14.31□□□□□ -0.12
RAB5C-202ENST00000393860 MAP1LC3AQ9H492 121 aa14.31□□□□□ -0.12
RAB5C-202ENST00000393860 KRTDAPP60985 99 aa14.3□□□□□ -0.12
RAB5C-202ENST00000393860 JOSD1Q15040 202 aaPredicted RBP14.3□□□□□ -0.12
RAB5C-202ENST00000393860 RPL39LQ96EH5 51 aaKnown RBP14.3□□□□□ -0.12
RAB5C-202ENST00000393860 AP5S1Q9NUS5 200 aa14.3□□□□□ -0.12
RAB5C-202ENST00000393860 LINC00315P59091 139 aa14.29□□□□□ -0.12
RAB5C-202ENST00000393860 MRAP2Q96G30 205 aa14.29□□□□□ -0.12
RAB5C-202ENST00000393860 C11orf72Q8NBR9 251 aa14.29□□□□□ -0.12
RAB5C-202ENST00000393860 LINC00467Q9BRT7 94 aa14.29□□□□□ -0.12
RAB5C-202ENST00000393860 TRRAPQ9Y4A5 3859 aa14.28□□□□□ -0.12
RAB5C-202ENST00000393860 NOTCH3Q9UM47 2321 aa14.28□□□□□ -0.12
RAB5C-202ENST00000393860 LINC00173Q6ZV60 143 aa14.28□□□□□ -0.12
RAB5C-202ENST00000393860 WFDC9Q8NEX5 89 aa14.28□□□□□ -0.12
RAB5C-202ENST00000393860 RASL10AQ92737 203 aa14.28□□□□□ -0.12
RAB5C-202ENST00000393860 LAMTOR2Q9Y2Q5 125 aa14.28□□□□□ -0.12
RAB5C-202ENST00000393860 F5H697 171 aa14.27□□□□□ -0.12
RAB5C-202ENST00000393860 SCGB1D1O95968 90 aa14.27□□□□□ -0.12
RAB5C-202ENST00000393860 C12orf54Q6X4T0 127 aa14.27□□□□□ -0.12
RAB5C-202ENST00000393860 MCRIP2Q9BUT9 160 aaKnown RBP14.27□□□□□ -0.12
RAB5C-202ENST00000393860 SUMO4Q6EEV6 95 aa14.26□□□□□ -0.13
RAB5C-202ENST00000393860 MRPL16Q9NX20 251 aaKnown RBP14.26□□□□□ -0.13
RAB5C-202ENST00000393860 CRYGDP07320 174 aa14.25□□□□□ -0.13
RAB5C-202ENST00000393860 ZNF56Q15929 161 aa14.25□□□□□ -0.13
RAB5C-202ENST00000393860 IGHV3-73A0A0B4J1V6 119 aa14.25□□□□□ -0.13
RAB5C-202ENST00000393860 M0R2P5 195 aa14.25□□□□□ -0.13
RAB5C-202ENST00000393860 C3orf79P0CE67 100 aa14.25□□□□□ -0.13
RAB5C-202ENST00000393860 MORN3Q6PF18 240 aaPredicted RBP14.25□□□□□ -0.13
RAB5C-202ENST00000393860 GOLT1BQ9Y3E0 138 aa14.25□□□□□ -0.13
RAB5C-202ENST00000393860 PCP4L1A6NKN8 68 aa14.24□□□□□ -0.13
RAB5C-202ENST00000393860 POM121L12Q8N7R1 296 aa14.24□□□□□ -0.13
RAB5C-202ENST00000393860 A0A096LNJ9 63 aa14.23□□□□□ -0.13
RAB5C-202ENST00000393860 CSNK1G2-AS1Q8NCQ2 148 aa14.23□□□□□ -0.13
RAB5C-202ENST00000393860 LEPROTL1O95214 131 aa14.23□□□□□ -0.13
RAB5C-202ENST00000393860 SHISA2Q6UWI4 295 aa14.23□□□□□ -0.13
RAB5C-202ENST00000393860 C1QTNF4Q9BXJ3 329 aa14.23□□□□□ -0.13
RAB5C-202ENST00000393860 IGLV2-18A0A075B6J9 118 aa14.22□□□□□ -0.13
RAB5C-202ENST00000393860 Q8N8P6 123 aa14.22□□□□□ -0.13
RAB5C-202ENST00000393860 RNASE8Q8TDE3 154 aaKnown RBP14.22□□□□□ -0.13
RAB5C-202ENST00000393860 NXT2Q9NPJ8 142 aaKnown RBP14.22□□□□□ -0.13
RAB5C-202ENST00000393860 MAST4O15021 2626 aa14.22□□□□□ -0.13
RAB5C-202ENST00000393860 TCAPO15273 167 aa14.21□□□□□ -0.13
RAB5C-202ENST00000393860 OXLD1Q5BKU9 147 aa14.21□□□□□ -0.13
RAB5C-202ENST00000393860 CSTL1Q9H114 145 aa14.21□□□□□ -0.13
RAB5C-202ENST00000393860 Q8N976 141 aa14.21□□□□□ -0.14
RAB5C-202ENST00000393860 SPXQ9BT56 116 aa14.21□□□□□ -0.14
RAB5C-202ENST00000393860 SUMO2P61956 95 aaKnown RBP14.2□□□□□ -0.14
RAB5C-202ENST00000393860 NEGR1Q7Z3B1 354 aa14.2□□□□□ -0.14
RAB5C-202ENST00000393860 DEFB104AQ8WTQ1 72 aa14.2□□□□□ -0.14
RAB5C-202ENST00000393860 SMIM2Q9BVW6 85 aa14.2□□□□□ -0.14
RAB5C-202ENST00000393860 SPATA12Q7Z6I5 190 aa14.19□□□□□ -0.14
RAB5C-202ENST00000393860 IL17DQ8TAD2 202 aa14.19□□□□□ -0.14
RAB5C-202ENST00000393860 TMEM263Q8WUH6 116 aaKnown RBP14.19□□□□□ -0.14
RAB5C-202ENST00000393860 TMEM158Q8WZ71 300 aa14.19□□□□□ -0.14
RAB5C-202ENST00000393860 S100A12P80511 92 aa14.19□□□□□ -0.14
RAB5C-202ENST00000393860 TRGV1A0A0A0MS02 117 aa14.18□□□□□ -0.14
RAB5C-202ENST00000393860 PRSS47A8MTI9 375 aa14.18□□□□□ -0.14
RAB5C-202ENST00000393860 H0Y8G0 127 aa14.18□□□□□ -0.14
RAB5C-202ENST00000393860 NACAE9PAV3 2078 aa14.18□□□□□ -0.14
RAB5C-202ENST00000393860 STAB1Q9NY15 2570 aa14.17□□□□□ -0.14
RAB5C-202ENST00000393860 LINC01546A6NGU7 62 aa14.17□□□□□ -0.14
RAB5C-202ENST00000393860 WIPF1O43516 503 aa14.17□□□□□ -0.14
RAB5C-202ENST00000393860 HBDP02042 147 aa14.17□□□□□ -0.14
RAB5C-202ENST00000393860 CFAP126Q5VTH2 177 aa14.17□□□□□ -0.14
RAB5C-202ENST00000393860 ZNF705AQ6ZN79 300 aaPredicted RBP14.17□□□□□ -0.14
RAB5C-202ENST00000393860 A8MWV9 139 aa14.17□□□□□ -0.14
RAB5C-202ENST00000393860 M0QY20 66 aa14.17□□□□□ -0.14
RAB5C-202ENST00000393860 C20orf78Q9BR46 151 aa14.17□□□□□ -0.14
RAB5C-202ENST00000393860 NOP10Q9NPE3 64 aaKnown RBP14.17□□□□□ -0.14
RAB5C-202ENST00000393860 RRN3P1Q2M238 152 aa14.16□□□□□ -0.14
RAB5C-202ENST00000393860 Q6ZTI0 123 aa14.16□□□□□ -0.14
RAB5C-202ENST00000393860 PTH2Q96A98 100 aa14.16□□□□□ -0.14
RAB5C-202ENST00000393860 ST20Q9HBF5 79 aa14.16□□□□□ -0.14
RAB5C-202ENST00000393860 HSPB8Q9UJY1 196 aa14.16□□□□□ -0.14
RAB5C-202ENST00000393860 PLAC8L1A1L4L8 177 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 P0DMU3 169 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 FAM231AP0DMU4 169 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 FAM231CP0DMU5 169 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 UFSP1Q6NVU6 142 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 TMEM70Q9BUB7 260 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 LAGE3Q14657 143 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 Q6ZSN1 163 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 ATOH7Q8N100 152 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 C16orf74Q96GX8 76 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 C18orf15Q96N68 181 aa14.15□□□□□ -0.14
RAB5C-202ENST00000393860 PPP1R17O96001 155 aa14.14□□□□□ -0.15
RAB5C-202ENST00000393860 FCER1GP30273 86 aa14.14□□□□□ -0.15
RAB5C-202ENST00000393860 SYS1-DBNDD2H3BUS1 97 aa14.13□□□□□ -0.15
RAB5C-202ENST00000393860 EMP1P54849 157 aa14.13□□□□□ -0.15
RAB5C-202ENST00000393860 KRTAP10-11P60412 298 aa14.13□□□□□ -0.15
RAB5C-202ENST00000393860 PIK3CD-AS1Q5SR53 167 aa14.13□□□□□ -0.15
RAB5C-202ENST00000393860 MAP1LC3CQ9BXW4 147 aa14.13□□□□□ -0.15
RAB5C-202ENST00000393860 PRO1933Q9H354 126 aa14.13□□□□□ -0.15
RAB5C-202ENST00000393860 RS1O15537 224 aa14.13□□□□□ -0.15
RAB5C-202ENST00000393860 IGHV3-53P01767 116 aa14.13□□□□□ -0.15
RAB5C-202ENST00000393860 SDHAF1A6NFY7 115 aa14.12□□□□□ -0.15
RAB5C-202ENST00000393860 CMYA5Q8N3K9 4069 aa14.11□□□□□ -0.15
RAB5C-202ENST00000393860 NUDT3O95989 172 aa14.11□□□□□ -0.15
RAB5C-202ENST00000393860 DEFB135Q30KP9 77 aa14.11□□□□□ -0.15
RAB5C-202ENST00000393860 Q9UF83 564 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms