RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 TMEM30CPA0ZSE6 113 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 C19orf71A6NCJ1 209 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RBMY1BA6NDE4 496 aaKnown RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RBMY1EA6NEQ0 496 aaKnown RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 DNAJC9-AS1A6NH13 148 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 ZNF815PA8K554 130 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 E7EQL1 145 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 MRPS12O15235 138 aaKnown RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 SPRY2O43597 315 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 BUB3O43684 328 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 IGLV2-14P01704 120 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 IGLV2-8P01709 118 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 IGHG2P01859 326 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RBMY1DP0C7P1 496 aaKnown RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RBMY1A1P0DJD3 496 aaKnown RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RBMY1CP0DJD4 496 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 INAFM2P0DMQ5 153 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 VPREB1P12018 145 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 IFI27P40305 119 aaPredicted RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 UBE2D1P51668 147 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 ZNF138P52744 262 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 EFNA4P52798 201 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 LOXL1Q08397 574 aaPredicted RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RBMY1FQ15415 496 aaKnown RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 BEAN1Q3B7T3 259 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 PAPPA-AS1Q5QFB9 102 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 S100A7L2Q5SY68 101 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 ASPHD1Q5U4P2 390 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 MIC13Q5XKP0 118 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 CD164L2Q6UWJ8 174 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 NDUFA11Q86Y39 141 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 C11orf53Q8IXP5 236 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 VKORC1L1Q8N0U8 176 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RNF182Q8N6D2 247 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 WFDC11Q8NEX6 87 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RFESDQ8TAC1 157 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 SSMEM1Q8WWF3 244 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 LINC00476Q8WZB0 136 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 CCL17Q92583 94 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 VSIG2Q96IQ7 327 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 FAM19A4Q96LR4 140 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 PRR25Q96S07 402 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 METTL26Q96S19 204 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 FOXC2Q99958 501 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 PRSS22Q9GZN4 317 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 DPH3P1Q9H4G8 78 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RPUSD1Q9UJJ7 312 aaKnown RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 RELNP78509 3460 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 MED13LQ71F56 2210 aa2.02□□□□□ -2.09
TRAV41-201ENST00000390468 PRRC2AP48634 2157 aaKnown RBP2.02□□□□□ -2.09
TRAV41-201ENST00000390468 IGKV2D-26A0A0A0MRZ7 120 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 IGHV3-43A0A0B4J1X8 118 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 TRAV12-1A0A0B4J245 112 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 IGKV1D-13A0A0B4J2D9 117 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 TEX49A0A1B0GTD5 131 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 LOC389332A0A1B0GUA5 103 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 PMS2P5A8MQ11 134 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 DEFB108AA8MXU0 73 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 D6R8Y8 96 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 F8VRH5 84 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 INS-IGF2F8WCM5 200 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 C19orf84I3L1E1 186 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 NDUFB3O43676 98 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 NDUFC1O43677 76 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 COX7A2P2O60397 106 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 DNAL4O96015 105 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 LHBP01229 141 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 IGHV4-39P01824 125 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 TFF1P04155 84 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 TCRAP04437 139 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 CFC1BP0CG36 223 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 CFC1P0CG37 223 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 IGHV3-43DP0DP04 118 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 IGKV1-13P0DP09 117 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 DEFA4P12838 97 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 GP9P14770 177 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 LGALS3P17931 250 aaKnown RBP2.01□□□□□ -2.09
TRAV41-201ENST00000390468 COL8A2P25067 703 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 LOXP28300 417 aaPredicted RBP2.01□□□□□ -2.09
TRAV41-201ENST00000390468 CKS2P33552 79 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 HIST1H4AP62805 103 aaKnown RBP2.01□□□□□ -2.09
TRAV41-201ENST00000390468 HOXA4Q00056 320 aaPredicted RBP2.01□□□□□ -2.09
TRAV41-201ENST00000390468 PLGLAQ15195 96 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 ORMDL2Q53FV1 153 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 DEFB121Q5J5C9 76 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 ATP5EP2Q5VTU8 51 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 SFTA2Q6UW10 78 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 ZFP2Q6ZN57 461 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 ZNF497Q6ZNH5 498 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 MIR17HGQ75NE6 70 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 LINC00305Q7Z4B0 112 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 ZNF329Q86UD4 541 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 PRR15Q8IV56 129 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 LINC01561Q8N1V8 128 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 ZCCHC24Q8N2G6 241 aaKnown RBP2.01□□□□□ -2.09
TRAV41-201ENST00000390468 ZNF843Q8N446 348 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 LINC00311Q8N616 119 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 FAM216BQ8N7L0 139 aa2.01□□□□□ -2.09
TRAV41-201ENST00000390468 ZNRF1Q8ND25 227 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms