RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 LINC01546A6NGU7 62 aa12.63□□□□□ -0.39
THUMPD2-201ENST00000378727 PRSS47A8MTI9 375 aa12.63□□□□□ -0.39
THUMPD2-201ENST00000378727 ZNF876PQ49A33 203 aa12.63□□□□□ -0.39
THUMPD2-201ENST00000378727 DEFB125Q8N687 156 aa12.63□□□□□ -0.39
THUMPD2-201ENST00000378727 C11orf72Q8NBR9 251 aa12.63□□□□□ -0.39
THUMPD2-201ENST00000378727 LEPROTL1O95214 131 aa12.62□□□□□ -0.39
THUMPD2-201ENST00000378727 SMIM17P0DL12 118 aa12.62□□□□□ -0.39
THUMPD2-201ENST00000378727 RPL35AP18077 110 aaKnown RBP12.62□□□□□ -0.39
THUMPD2-201ENST00000378727 RPL39LQ96EH5 51 aaKnown RBP12.62□□□□□ -0.39
THUMPD2-201ENST00000378727 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
THUMPD2-201ENST00000378727 CRYGDP07320 174 aa12.61□□□□□ -0.39
THUMPD2-201ENST00000378727 AZU1P20160 251 aa12.61□□□□□ -0.39
THUMPD2-201ENST00000378727 ZNF415Q09FC8 603 aa12.61□□□□□ -0.39
THUMPD2-201ENST00000378727 Q8N8P6 123 aa12.61□□□□□ -0.39
THUMPD2-201ENST00000378727 FAM74A4Q5TZK3 123 aa12.6□□□□□ -0.39
THUMPD2-201ENST00000378727 TMEM208Q9BTX3 173 aa12.6□□□□□ -0.39
THUMPD2-201ENST00000378727 IGHV3OR16-12A0A075B7B8 117 aa12.6□□□□□ -0.39
THUMPD2-201ENST00000378727 BTF3P20290 206 aaKnown RBP12.6□□□□□ -0.39
THUMPD2-201ENST00000378727 SUMO4Q6EEV6 95 aa12.6□□□□□ -0.39
THUMPD2-201ENST00000378727 SPATA12Q7Z6I5 190 aa12.6□□□□□ -0.39
THUMPD2-201ENST00000378727 WFDC9Q8NEX5 89 aa12.59□□□□□ -0.39
THUMPD2-201ENST00000378727 M0R2P5 195 aa12.58□□□□□ -0.39
THUMPD2-201ENST00000378727 PRIMA1Q86XR5 153 aa12.58□□□□□ -0.39
THUMPD2-201ENST00000378727 FBN1P35555 2871 aaKnown RBP12.58□□□□□ -0.4
THUMPD2-201ENST00000378727 SUMO2P61956 95 aaKnown RBP12.58□□□□□ -0.4
THUMPD2-201ENST00000378727 TEX43Q6ZNM6 134 aa12.58□□□□□ -0.4
THUMPD2-201ENST00000378727 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
THUMPD2-201ENST00000378727 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
THUMPD2-201ENST00000378727 ZNF747Q9BV97 191 aa12.58□□□□□ -0.4
THUMPD2-201ENST00000378727 SMIM2Q9BVW6 85 aa12.58□□□□□ -0.4
THUMPD2-201ENST00000378727 F5H697 171 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 HBDP02042 147 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 S100A12P80511 92 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 GTSCR1Q86UQ5 136 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 ZNF664Q8N3J9 261 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 PTH2Q96A98 100 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 HSPB8Q9UJY1 196 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 TRRAPQ9Y4A5 3859 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 NACAE9PAV3 2078 aa12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 MORN3Q6PF18 240 aaPredicted RBP12.57□□□□□ -0.4
THUMPD2-201ENST00000378727 SYS1-DBNDD2H3BUS1 97 aa12.56□□□□□ -0.4
THUMPD2-201ENST00000378727 IGLL1P15814 213 aa12.56□□□□□ -0.4
THUMPD2-201ENST00000378727 PIK3CD-AS1Q5SR53 167 aa12.56□□□□□ -0.4
THUMPD2-201ENST00000378727 RNASE8Q8TDE3 154 aaKnown RBP12.56□□□□□ -0.4
THUMPD2-201ENST00000378727 SPXQ9BT56 116 aa12.56□□□□□ -0.4
THUMPD2-201ENST00000378727 TCAPO15273 167 aa12.55□□□□□ -0.4
THUMPD2-201ENST00000378727 ZNF56Q15929 161 aa12.55□□□□□ -0.4
THUMPD2-201ENST00000378727 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
THUMPD2-201ENST00000378727 MCRIP2Q9BUT9 160 aaKnown RBP12.55□□□□□ -0.4
THUMPD2-201ENST00000378727 PPP1R17O96001 155 aa12.55□□□□□ -0.4
THUMPD2-201ENST00000378727 FCER1GP30273 86 aa12.55□□□□□ -0.4
THUMPD2-201ENST00000378727 C1QTNF4Q9BXJ3 329 aa12.55□□□□□ -0.4
THUMPD2-201ENST00000378727 PRO1933Q9H354 126 aa12.55□□□□□ -0.4
THUMPD2-201ENST00000378727 M0QY20 66 aa12.54□□□□□ -0.4
THUMPD2-201ENST00000378727 UFSP1Q6NVU6 142 aa12.54□□□□□ -0.4
THUMPD2-201ENST00000378727 MAP1LC3CQ9BXW4 147 aa12.54□□□□□ -0.4
THUMPD2-201ENST00000378727 MRPL16Q9NX20 251 aaKnown RBP12.54□□□□□ -0.4
THUMPD2-201ENST00000378727 GOLT1BQ9Y3E0 138 aa12.54□□□□□ -0.4
THUMPD2-201ENST00000378727 LAGE3Q14657 143 aa12.53□□□□□ -0.4
THUMPD2-201ENST00000378727 TMEM158Q8WZ71 300 aa12.53□□□□□ -0.4
THUMPD2-201ENST00000378727 A8MWV9 139 aa12.53□□□□□ -0.4
THUMPD2-201ENST00000378727 TMEM263Q8WUH6 116 aaKnown RBP12.53□□□□□ -0.4
THUMPD2-201ENST00000378727 WIPF1O43516 503 aa12.52□□□□□ -0.4
THUMPD2-201ENST00000378727 PKIAP61925 76 aa12.52□□□□□ -0.4
THUMPD2-201ENST00000378727 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.4
THUMPD2-201ENST00000378727 ZNF705AQ6ZN79 300 aaPredicted RBP12.52□□□□□ -0.4
THUMPD2-201ENST00000378727 CSTL1Q9H114 145 aa12.52□□□□□ -0.4
THUMPD2-201ENST00000378727 ST20Q9HBF5 79 aa12.52□□□□□ -0.4
THUMPD2-201ENST00000378727 IGHV3-73A0A0B4J1V6 119 aa12.52□□□□□ -0.41
THUMPD2-201ENST00000378727 POLR2KP53803 58 aaKnown RBP12.52□□□□□ -0.41
THUMPD2-201ENST00000378727 ATOH7Q8N100 152 aa12.52□□□□□ -0.41
THUMPD2-201ENST00000378727 TRBV6-5A0A0K0K1A5 114 aa12.51□□□□□ -0.41
THUMPD2-201ENST00000378727 RPL32P62910 135 aaKnown RBP12.51□□□□□ -0.41
THUMPD2-201ENST00000378727 PET117Q6UWS5 81 aa12.51□□□□□ -0.41
THUMPD2-201ENST00000378727 NEGR1Q7Z3B1 354 aa12.51□□□□□ -0.41
THUMPD2-201ENST00000378727 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
THUMPD2-201ENST00000378727 H0Y8G0 127 aa12.5□□□□□ -0.41
THUMPD2-201ENST00000378727 C3orf56Q8N813 242 aa12.5□□□□□ -0.41
THUMPD2-201ENST00000378727 VAMP8Q9BV40 100 aa12.5□□□□□ -0.41
THUMPD2-201ENST00000378727 IFI27L1Q96BM0 104 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 C18orf15Q96N68 181 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 EDA2RQ9HAV5 297 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 PAM16Q9Y3D7 125 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 KIR2DL5BA0A0G2JN68 375 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 KIR2DL5BA0A0G2JPC4 375 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 SDHAF1A6NFY7 115 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 TSTD3H0UI37 97 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 RS1O15537 224 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 LINC01545Q5VT33 79 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 Q6ZSN1 163 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 KIR2DL5AQ8N109 375 aa12.49□□□□□ -0.41
THUMPD2-201ENST00000378727 STAB1Q9NY15 2570 aa12.48□□□□□ -0.41
THUMPD2-201ENST00000378727 LINC00587B1AMM8 73 aa12.48□□□□□ -0.41
THUMPD2-201ENST00000378727 K7EMI3 77 aa12.48□□□□□ -0.41
THUMPD2-201ENST00000378727 MAJINQ3KP22 176 aa12.48□□□□□ -0.41
THUMPD2-201ENST00000378727 C16orf74Q96GX8 76 aa12.48□□□□□ -0.41
THUMPD2-201ENST00000378727 NDUFAF3Q9BU61 184 aa12.48□□□□□ -0.41
THUMPD2-201ENST00000378727 MAST4O15021 2626 aa12.48□□□□□ -0.41
THUMPD2-201ENST00000378727 TRGV1A0A0A0MS02 117 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms