RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 MGPP08493 103 aa12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 C9orf139Q6ZV77 190 aa12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 GPHB5Q86YW7 130 aa12.53□□□□□ -0.4
PCDHA1-201ENST00000378133 TRBV20-1A0A075B6N2 111 aa12.52□□□□□ -0.41
PCDHA1-201ENST00000378133 FAM223BA6NKX1 122 aa12.52□□□□□ -0.41
PCDHA1-201ENST00000378133 C19orf54Q5BKX5 351 aa12.52□□□□□ -0.41
PCDHA1-201ENST00000378133 FAM223AQ8IWN6 122 aa12.52□□□□□ -0.41
PCDHA1-201ENST00000378133 C19orf84I3L1E1 186 aa12.52□□□□□ -0.41
PCDHA1-201ENST00000378133 TGFAP01135 160 aa12.52□□□□□ -0.41
PCDHA1-201ENST00000378133 IGKV3-7A0A075B6H7 116 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 A0A0J9YY99 117 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 ZNF688P0C7X2 276 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 SCGB1C2P0DMR2 95 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 RPL11P62913 178 aaKnown RBP12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 ZFAND2AQ8N6M9 145 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 IGHV3-11P01762 117 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 EMP1P54849 157 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 LINC00477Q96M19 166 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 CITED1Q99966 193 aa12.51□□□□□ -0.41
PCDHA1-201ENST00000378133 CFAP46Q8IYW2 2715 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 C11orf86A6NJI1 115 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 RNF223E7ERA6 249 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 DUSP14O95147 198 aaKnown RBP12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 CRYGDP07320 174 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 CFC1BP0CG36 223 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 CFC1P0CG37 223 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 LY6EQ16553 131 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 LENEPQ9Y5L5 61 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 CCDC179H3BU77 68 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 HERVK_113P61574 105 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 OR10J6PQ8NGY7 276 aa12.5□□□□□ -0.41
PCDHA1-201ENST00000378133 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
PCDHA1-201ENST00000378133 F6UB75 175 aa12.49□□□□□ -0.41
PCDHA1-201ENST00000378133 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
PCDHA1-201ENST00000378133 SBSPONQ8IVN8 264 aa12.49□□□□□ -0.41
PCDHA1-201ENST00000378133 IGHV4-39P01824 125 aa12.49□□□□□ -0.41
PCDHA1-201ENST00000378133 ANKRD29Q8N6D5 301 aa12.49□□□□□ -0.41
PCDHA1-201ENST00000378133 KIR2DL4Q99706 377 aa12.49□□□□□ -0.41
PCDHA1-201ENST00000378133 YAE1D1Q9NRH1 226 aa12.49□□□□□ -0.41
PCDHA1-201ENST00000378133 TRAV21A0A0B4J279 112 aa12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 ASIPP42127 132 aa12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 ATP5J2P56134 94 aa12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 Q6ZS46 218 aa12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 C10orf126Q8N4M7 172 aa12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 SPG11Q96JI7 2443 aa12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 NDUFA4O00483 81 aa12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 IGHV3-30P01768 117 aa12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 IGHV3-30-5P0DP03 117 aa12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.48□□□□□ -0.41
PCDHA1-201ENST00000378133 IGLV4-69A0A075B6H9 119 aa12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 SOCS3O14543 225 aa12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 RNASE4P34096 147 aaKnown RBP12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 ZFAND6Q6FIF0 208 aa12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 OVOL1O14753 267 aa12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 GNRH2O43555 120 aa12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 CRIP2P52943 208 aaPredicted RBP12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 DEFB104AQ8WTQ1 72 aa12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 PRO1854Q9UHT4 67 aa12.47□□□□□ -0.41
PCDHA1-201ENST00000378133 PPP1R17O96001 155 aa12.46□□□□□ -0.41
PCDHA1-201ENST00000378133 TSHBP01222 138 aa12.46□□□□□ -0.41
PCDHA1-201ENST00000378133 TEX29Q8N6K0 151 aa12.46□□□□□ -0.41
PCDHA1-201ENST00000378133 IGHV4-38-2P0DP08 117 aa12.46□□□□□ -0.41
PCDHA1-201ENST00000378133 SLC25A29Q8N8R3 303 aa12.46□□□□□ -0.41
PCDHA1-201ENST00000378133 RAX2Q96IS3 184 aa12.46□□□□□ -0.41
PCDHA1-201ENST00000378133 TP53TG1Q9Y2A0 90 aa12.46□□□□□ -0.41
PCDHA1-201ENST00000378133 IGHV4-61A0A0C4DH41 118 aa12.46□□□□□ -0.42
PCDHA1-201ENST00000378133 TMEM170BQ5T4T1 132 aa12.46□□□□□ -0.42
PCDHA1-201ENST00000378133 BBC3Q96PG8 261 aaPredicted RBP12.46□□□□□ -0.42
PCDHA1-201ENST00000378133 PRB1P04280 392 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 PF4V1P10720 104 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 BLCAPP62952 87 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 PMVKQ15126 192 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 GAGE7O76087 117 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 GAGE12FP0CL80 117 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 GAGE12GP0CL81 117 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 GAGE12IP0CL82 117 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 SRD5A1P18405 259 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 TSPEAR-AS2P59090 65 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 GAGE4Q13068 117 aa12.45□□□□□ -0.42
PCDHA1-201ENST00000378133 IGIPA6NJ69 53 aa12.44□□□□□ -0.42
PCDHA1-201ENST00000378133 H3BUX3 64 aa12.44□□□□□ -0.42
PCDHA1-201ENST00000378133 PPDPFQ9H3Y8 114 aa12.44□□□□□ -0.42
PCDHA1-201ENST00000378133 SLC25A20O43772 301 aa12.43□□□□□ -0.42
PCDHA1-201ENST00000378133 RHPN1-AS1Q9BWJ2 59 aa12.43□□□□□ -0.42
PCDHA1-201ENST00000378133 MUC4Q99102 2169 aa12.43□□□□□ -0.42
PCDHA1-201ENST00000378133 C9JAW5 83 aa12.43□□□□□ -0.42
PCDHA1-201ENST00000378133 IGHG2P01859 326 aa12.43□□□□□ -0.42
PCDHA1-201ENST00000378133 RNASE3P12724 160 aaKnown RBP12.43□□□□□ -0.42
PCDHA1-201ENST00000378133 USMG5Q96IX5 58 aa12.43□□□□□ -0.42
PCDHA1-201ENST00000378133 M0QXV9 152 aa12.42□□□□□ -0.42
PCDHA1-201ENST00000378133 RPL39P62891 51 aaKnown RBP12.42□□□□□ -0.42
PCDHA1-201ENST00000378133 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
PCDHA1-201ENST00000378133 VPREB3Q9UKI3 123 aa12.42□□□□□ -0.42
PCDHA1-201ENST00000378133 CSPG4Q6UVK1 2322 aa12.42□□□□□ -0.42
PCDHA1-201ENST00000378133 J3QQQ9 107 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms