RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 TRBV10-2A0A0K0K1G8 114 aa11.82□□□□□ -0.52
CSNK1A1-202ENST00000377843 H3BMM0 161 aa11.82□□□□□ -0.52
CSNK1A1-202ENST00000377843 ARL3P36405 182 aa11.82□□□□□ -0.52
CSNK1A1-202ENST00000377843 UBE2WQ96B02 151 aa11.82□□□□□ -0.52
CSNK1A1-202ENST00000377843 LINC01600Q96MT4 127 aa11.82□□□□□ -0.52
CSNK1A1-202ENST00000377843 TRIAP1O43715 76 aa11.81□□□□□ -0.52
CSNK1A1-202ENST00000377843 ITPR1Q14643 2758 aa11.81□□□□□ -0.52
CSNK1A1-202ENST00000377843 A0A0B4J2C4 111 aa11.81□□□□□ -0.52
CSNK1A1-202ENST00000377843 Q1RN00 199 aa11.81□□□□□ -0.52
CSNK1A1-202ENST00000377843 C9orf47Q6ZRZ4 202 aa11.81□□□□□ -0.52
CSNK1A1-202ENST00000377843 LGALS3P17931 250 aaKnown RBP11.8□□□□□ -0.52
CSNK1A1-202ENST00000377843 COL6A6A6NMZ7 2263 aa11.8□□□□□ -0.52
CSNK1A1-202ENST00000377843 IGHV3-64A0A075B6Q5 118 aa11.79□□□□□ -0.52
CSNK1A1-202ENST00000377843 DEFB1P60022 68 aa11.79□□□□□ -0.52
CSNK1A1-202ENST00000377843 ZNF56Q15929 161 aa11.79□□□□□ -0.52
CSNK1A1-202ENST00000377843 PAPPA-AS1Q5QFB9 102 aa11.79□□□□□ -0.52
CSNK1A1-202ENST00000377843 ZNF580Q9UK33 172 aa11.79□□□□□ -0.52
CSNK1A1-202ENST00000377843 DUX3Q96PT4 197 aa11.79□□□□□ -0.52
CSNK1A1-202ENST00000377843 OPRPNQ99935 248 aaPredicted RBP11.79□□□□□ -0.52
CSNK1A1-202ENST00000377843 YAE1D1Q9NRH1 226 aa11.79□□□□□ -0.52
CSNK1A1-202ENST00000377843 H7C423 109 aa11.78□□□□□ -0.52
CSNK1A1-202ENST00000377843 ZNF876PQ49A33 203 aa11.78□□□□□ -0.52
CSNK1A1-202ENST00000377843 DYNLRB1Q9NP97 96 aa11.78□□□□□ -0.52
CSNK1A1-202ENST00000377843 C2orf82Q6UX34 121 aa11.78□□□□□ -0.52
CSNK1A1-202ENST00000377843 C20orf173Q96LM9 149 aa11.78□□□□□ -0.52
CSNK1A1-202ENST00000377843 DPM3Q9P2X0 92 aa11.78□□□□□ -0.52
CSNK1A1-202ENST00000377843 DCHS2Q6V1P9 2916 aa11.78□□□□□ -0.52
CSNK1A1-202ENST00000377843 IGHV1-69DA0A0B4J2H0 117 aa11.77□□□□□ -0.52
CSNK1A1-202ENST00000377843 IGFL3Q6UXB1 125 aa11.77□□□□□ -0.52
CSNK1A1-202ENST00000377843 PHLDA3Q9Y5J5 127 aa11.77□□□□□ -0.52
CSNK1A1-202ENST00000377843 GNRH2O43555 120 aa11.77□□□□□ -0.53
CSNK1A1-202ENST00000377843 S100A4P26447 101 aaKnown RBP11.77□□□□□ -0.53
CSNK1A1-202ENST00000377843 LINC00315P59091 139 aa11.77□□□□□ -0.53
CSNK1A1-202ENST00000377843 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
CSNK1A1-202ENST00000377843 ZFAND2AQ8N6M9 145 aa11.77□□□□□ -0.53
CSNK1A1-202ENST00000377843 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.53
CSNK1A1-202ENST00000377843 Q8NA96 180 aa11.76□□□□□ -0.53
CSNK1A1-202ENST00000377843 JPT2Q9H910 190 aa11.76□□□□□ -0.53
CSNK1A1-202ENST00000377843 TRBV30A0A0K0K1B3 111 aa11.75□□□□□ -0.53
CSNK1A1-202ENST00000377843 ZNF22P17026 224 aaPredicted RBP11.75□□□□□ -0.53
CSNK1A1-202ENST00000377843 Q6ZSV7 163 aa11.75□□□□□ -0.53
CSNK1A1-202ENST00000377843 TMEM223A0PJW6 202 aa11.75□□□□□ -0.53
CSNK1A1-202ENST00000377843 E7EQL1 145 aa11.75□□□□□ -0.53
CSNK1A1-202ENST00000377843 RNASE3P12724 160 aaKnown RBP11.75□□□□□ -0.53
CSNK1A1-202ENST00000377843 POLR2KP53803 58 aaKnown RBP11.75□□□□□ -0.53
CSNK1A1-202ENST00000377843 CEMP1Q6PRD7 247 aaPredicted RBP11.75□□□□□ -0.53
CSNK1A1-202ENST00000377843 LRBAP50851 2863 aa11.75□□□□□ -0.53
CSNK1A1-202ENST00000377843 KIF25-AS1Q9Y6Z4 181 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 IGHV7-81A0A0B4J1V7 117 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 ADARB2-AS1A8MUL3 147 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 LEPROTO15243 131 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 UBE2E1P51965 193 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 MRPL53Q96EL3 112 aaKnown RBP11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 TMEM141Q96I45 108 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 CCDC140Q96MF4 163 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 TIMM17AQ99595 171 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 TMEM126AQ9H061 195 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 TRBV7-7A0A0K0K1E9 115 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 K7ENP7 123 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 M0R2P5 195 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 LINC00694P0DN24 101 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 EBI3Q14213 229 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 CLEC19AQ6UXS0 136 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 CLEC2BQ92478 149 aa11.74□□□□□ -0.53
CSNK1A1-202ENST00000377843 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
CSNK1A1-202ENST00000377843 SPANXA1Q9NS26 97 aa11.73□□□□□ -0.53
CSNK1A1-202ENST00000377843 POM121L12Q8N7R1 296 aa11.73□□□□□ -0.53
CSNK1A1-202ENST00000377843 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 CACNA1BQ00975 2339 aa11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 A0A0J9YXY3 114 aa11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 LOC107984640A0A0U1RRK4 108 aa11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 FAM236AA0A1B0GUQ0 79 aa11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 FAM236BA0A1B0GV22 79 aa11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 SUMO4Q6EEV6 95 aa11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 ITLN2Q8WWU7 325 aaPredicted RBP11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 C16orf92Q96LL3 132 aa11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 LITAFQ99732 161 aa11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
CSNK1A1-202ENST00000377843 TRGV11A0A075B6L2 103 aa11.71□□□□□ -0.53
CSNK1A1-202ENST00000377843 A0A0G2JNJ9 132 aa11.71□□□□□ -0.53
CSNK1A1-202ENST00000377843 Q9UFV3 132 aa11.71□□□□□ -0.53
CSNK1A1-202ENST00000377843 MUC4Q99102 2169 aa11.71□□□□□ -0.54
CSNK1A1-202ENST00000377843 IGHV4OR15-8A0A075B7B6 117 aa11.71□□□□□ -0.54
CSNK1A1-202ENST00000377843 A0A087WW49 117 aa11.71□□□□□ -0.54
CSNK1A1-202ENST00000377843 TRAV21A0A0B4J279 112 aa11.71□□□□□ -0.54
CSNK1A1-202ENST00000377843 ECSCRQ19T08 205 aa11.71□□□□□ -0.54
CSNK1A1-202ENST00000377843 Q8N6K4 173 aa11.71□□□□□ -0.54
CSNK1A1-202ENST00000377843 A0A087WWL8 130 aa11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 FAM240AA0A1B0GVK7 77 aa11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 RNASE4P34096 147 aaKnown RBP11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 SDHAF1A6NFY7 115 aa11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 ATP5J2P56134 94 aa11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 DEFB121Q5J5C9 76 aa11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 LY6G5BQ8NDX9 201 aa11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 NRGNQ92686 78 aa11.7□□□□□ -0.54
CSNK1A1-202ENST00000377843 ODF3BA8MYP8 253 aa11.69□□□□□ -0.54
CSNK1A1-202ENST00000377843 H3BT86 120 aa11.69□□□□□ -0.54
CSNK1A1-202ENST00000377843 PPP1R17O96001 155 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms