RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 LINC00322Q6ZN03 302 aaPredicted RBP5.03□□□□□ -1.6
UBR4-204ENST00000375254 HTN3P15516 51 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 MYCNOSP40205 109 aa5.03□□□□□ -1.6
UBR4-204ENST00000375254 RPL39P62891 51 aaKnown RBP5.03□□□□□ -1.6
UBR4-204ENST00000375254 COL22A1Q8NFW1 1626 aaPredicted RBP5.02□□□□□ -1.61
UBR4-204ENST00000375254 IGLV11-55A0A075B6I3 123 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 IGLV2-14P01704 120 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 C17orf82Q86X59 251 aaPredicted RBP5.02□□□□□ -1.61
UBR4-204ENST00000375254 SPINK13Q1W4C9 94 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 IGLV1-44P01699 117 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 DIAPH2-AS1Q14236 149 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 NTM-AS1Q6ZSK4 140 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 Q8N6K4 173 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 APOC4P55056 127 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 DEFB121Q5J5C9 76 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 Q0VFX4 171 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 MED12LQ86YW9 2145 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 H0Y9J4 135 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 C16orf74Q96GX8 76 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 COX8CQ7Z4L0 72 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 GPHB5Q86YW7 130 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 RGPD1P0DJD0 1748 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 M0QY20 66 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 Q8N814 137 aa5.02□□□□□ -1.61
UBR4-204ENST00000375254 PPLO60437 1756 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 MYO5BQ9ULV0 1848 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 IGIPA6NJ69 53 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 N4BP2Q86UW6 1770 aaPredicted RBP5.01□□□□□ -1.61
UBR4-204ENST00000375254 FAM30AQ9NZY2 134 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 SEM1Q6ZVN7 128 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 NANOS2P60321 138 aaKnown RBP5.01□□□□□ -1.61
UBR4-204ENST00000375254 SOSTDC1Q6X4U4 206 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 RIMS1Q86UR5 1692 aaKnown RBP5.01□□□□□ -1.61
UBR4-204ENST00000375254 ZNF672Q499Z4 452 aaPredicted RBP5.01□□□□□ -1.61
UBR4-204ENST00000375254 CCL19Q99731 98 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 SAA4P35542 130 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 IGHV3-16A0A0C4DH30 117 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 F8P00451 2351 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 CCDC88AQ3V6T2 1871 aa5.01□□□□□ -1.61
UBR4-204ENST00000375254 CAMK2N2Q96S95 79 aa5□□□□□ -1.61
UBR4-204ENST00000375254 Q8N3U1 123 aa5□□□□□ -1.61
UBR4-204ENST00000375254 OVOL3O00110 214 aa5□□□□□ -1.61
UBR4-204ENST00000375254 SPAG11AQ6PDA7 123 aa5□□□□□ -1.61
UBR4-204ENST00000375254 IGF2-ASQ6U949 168 aa5□□□□□ -1.61
UBR4-204ENST00000375254 LINC01560Q8TB33 94 aa5□□□□□ -1.61
UBR4-204ENST00000375254 B9D2Q9BPU9 175 aa5□□□□□ -1.61
UBR4-204ENST00000375254 A0A087WZ39 114 aa5□□□□□ -1.61
UBR4-204ENST00000375254 C4orf48Q5BLP8 95 aa5□□□□□ -1.61
UBR4-204ENST00000375254 PRO0461Q9UI25 63 aa5□□□□□ -1.61
UBR4-204ENST00000375254 LINC01546A6NGU7 62 aa5□□□□□ -1.61
UBR4-204ENST00000375254 RETNLBQ9BQ08 111 aa5□□□□□ -1.61
UBR4-204ENST00000375254 HCG22E2RYF7 251 aa5□□□□□ -1.61
UBR4-204ENST00000375254 ARHGAP32A7KAX9 2087 aa5□□□□□ -1.61
UBR4-204ENST00000375254 CICQ96RK0 1608 aaPredicted RBP4.99□□□□□ -1.61
UBR4-204ENST00000375254 CSPG4Q6UVK1 2322 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 GBF1Q92538 1859 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 IGLV3-9A0A075B6K5 115 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 SMIM11BQ8TCY0 68 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 FAM208AQ9UK61 1670 aaKnown RBP4.99□□□□□ -1.61
UBR4-204ENST00000375254 CRIP1P50238 77 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 PTPRFP10586 1907 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 RNASE13Q5GAN3 156 aaKnown RBP4.99□□□□□ -1.61
UBR4-204ENST00000375254 ANKRD26Q9UPS8 1709 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 COX6B1P14854 86 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 PSCAO43653 123 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 LINC00310P59036 64 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 NALCNQ8IZF0 1738 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 IGKV1OR2-108A0A075B7D4 117 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 DOCK6Q96HP0 2047 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 PIK3C2AO00443 1686 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 MDS2Q8NDY4 140 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 NOP10Q9NPE3 64 aaKnown RBP4.99□□□□□ -1.61
UBR4-204ENST00000375254 SPRR3Q9UBC9 169 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 BAZ2AQ9UIF9 1905 aaKnown RBP4.99□□□□□ -1.61
UBR4-204ENST00000375254 SIGLEC1Q9BZZ2 1709 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 IGHV3-38A0A0C4DH36 116 aa4.99□□□□□ -1.61
UBR4-204ENST00000375254 IGLV2-11P01706 119 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 SCN4AP35499 1836 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 ATP6V0E1O15342 81 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 TP53AIP1Q9HCN2 124 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 TRBV6-8A0A0A6YYG3 113 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 EPOPA6NHQ4 379 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 A8MZ25 164 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 IGLV4-3A0A075B6K6 122 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 M0R378 163 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 POLR2KP53803 58 aaKnown RBP4.98□□□□□ -1.61
UBR4-204ENST00000375254 MRGPRG-AS1Q2M3A8 158 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 C1orf158Q8N1D5 194 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 CUL9Q8IWT3 2517 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 TECTAO75443 2155 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 ELOF1P60002 83 aaKnown RBP4.98□□□□□ -1.61
UBR4-204ENST00000375254 LINC00208Q96KT6 92 aa4.98□□□□□ -1.61
UBR4-204ENST00000375254 PRB2P02812 416 aaPredicted RBP4.97□□□□□ -1.61
UBR4-204ENST00000375254 POM121L12Q8N7R1 296 aa4.97□□□□□ -1.61
UBR4-204ENST00000375254 CDKN2A-AS1Q9UH64 79 aa4.97□□□□□ -1.61
UBR4-204ENST00000375254 H3BUX3 64 aa4.97□□□□□ -1.61
UBR4-204ENST00000375254 SPRY2O43597 315 aa4.97□□□□□ -1.61
UBR4-204ENST00000375254 SHROOM3Q8TF72 1996 aa4.97□□□□□ -1.61
UBR4-204ENST00000375254 COL4A1P02462 1669 aa4.97□□□□□ -1.61
UBR4-204ENST00000375254 HILS1P60008 231 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms