RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 LY6LH3BQJ8 138 aa15.54■□□□□ 0.08
TMEFF1-201ENST00000374879 GPHB5Q86YW7 130 aa15.54■□□□□ 0.08
TMEFF1-201ENST00000374879 TPRP12270 2363 aaKnown RBP15.54■□□□□ 0.08
TMEFF1-201ENST00000374879 BUB3O43684 328 aa15.54■□□□□ 0.08
TMEFF1-201ENST00000374879 POLEQ07864 2286 aa15.54■□□□□ 0.08
TMEFF1-201ENST00000374879 LOC107984640A0A0U1RRK4 108 aa15.53■□□□□ 0.08
TMEFF1-201ENST00000374879 IGF1P05019 195 aa15.53■□□□□ 0.08
TMEFF1-201ENST00000374879 LYNX1G3V0Z9 82 aa15.53■□□□□ 0.08
TMEFF1-201ENST00000374879 LYNX1P0DP58 116 aa15.53■□□□□ 0.08
TMEFF1-201ENST00000374879 NDPQ00604 133 aa15.53■□□□□ 0.08
TMEFF1-201ENST00000374879 TRBV30A0A0K0K1B3 111 aa15.52■□□□□ 0.08
TMEFF1-201ENST00000374879 TRBV7-7A0A0K0K1E9 115 aa15.52■□□□□ 0.08
TMEFF1-201ENST00000374879 ARHGAP32A7KAX9 2087 aa15.52■□□□□ 0.07
TMEFF1-201ENST00000374879 IGHV1-69DA0A0B4J2H0 117 aa15.51■□□□□ 0.07
TMEFF1-201ENST00000374879 M0R2P5 195 aa15.51■□□□□ 0.07
TMEFF1-201ENST00000374879 DNAJC30Q96LL9 226 aa15.51■□□□□ 0.07
TMEFF1-201ENST00000374879 TRGV11A0A075B6L2 103 aa15.51■□□□□ 0.07
TMEFF1-201ENST00000374879 IGHV3-64A0A075B6Q5 118 aa15.51■□□□□ 0.07
TMEFF1-201ENST00000374879 FAM236AA0A1B0GUQ0 79 aa15.51■□□□□ 0.07
TMEFF1-201ENST00000374879 FAM236BA0A1B0GV22 79 aa15.51■□□□□ 0.07
TMEFF1-201ENST00000374879 IGHV3-49A0A0A0MS15 119 aa15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 OOSP1A8MZH6 123 aa15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 ZNF22P17026 224 aaPredicted RBP15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 EBI3Q14213 229 aa15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 S100A4P26447 101 aaKnown RBP15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 HES1Q14469 280 aa15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 ZNF876PQ49A33 203 aa15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 CEMP1Q6PRD7 247 aaPredicted RBP15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 PHLDA3Q9Y5J5 127 aa15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 CEP295Q9C0D2 2601 aa15.5■□□□□ 0.07
TMEFF1-201ENST00000374879 C9orf47Q6ZRZ4 202 aa15.49■□□□□ 0.07
TMEFF1-201ENST00000374879 NPBQ8NG41 125 aa15.49■□□□□ 0.07
TMEFF1-201ENST00000374879 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.48■□□□□ 0.07
TMEFF1-201ENST00000374879 B9A039 149 aa15.48■□□□□ 0.07
TMEFF1-201ENST00000374879 FAM240AA0A1B0GVK7 77 aa15.48■□□□□ 0.07
TMEFF1-201ENST00000374879 POM121L12Q8N7R1 296 aa15.48■□□□□ 0.07
TMEFF1-201ENST00000374879 CD3EP07766 207 aa15.47■□□□□ 0.07
TMEFF1-201ENST00000374879 TMEM141Q96I45 108 aa15.47■□□□□ 0.07
TMEFF1-201ENST00000374879 ZFAND3Q9H8U3 227 aa15.47■□□□□ 0.07
TMEFF1-201ENST00000374879 LEPROTO15243 131 aa15.47■□□□□ 0.07
TMEFF1-201ENST00000374879 C9orf153Q5TBE3 101 aa15.47■□□□□ 0.07
TMEFF1-201ENST00000374879 TMEM101Q96IK0 257 aa15.47■□□□□ 0.07
TMEFF1-201ENST00000374879 UBE2E1P51965 193 aa15.47■□□□□ 0.07
TMEFF1-201ENST00000374879 C5orf47Q569G3 176 aa15.47■□□□□ 0.07
TMEFF1-201ENST00000374879 H3BT86 120 aa15.46■□□□□ 0.07
TMEFF1-201ENST00000374879 LY6DQ14210 128 aa15.46■□□□□ 0.07
TMEFF1-201ENST00000374879 CLEC2BQ92478 149 aa15.46■□□□□ 0.07
TMEFF1-201ENST00000374879 LRBAP50851 2863 aa15.46■□□□□ 0.07
TMEFF1-201ENST00000374879 TMEM223A0PJW6 202 aa15.46■□□□□ 0.06
TMEFF1-201ENST00000374879 NDUFA7O95182 113 aa15.46■□□□□ 0.06
TMEFF1-201ENST00000374879 TIMM17AQ99595 171 aa15.46■□□□□ 0.06
TMEFF1-201ENST00000374879 ICOSQ9Y6W8 199 aa15.46■□□□□ 0.06
TMEFF1-201ENST00000374879 CLPSL1A2RUU4 121 aa15.45■□□□□ 0.06
TMEFF1-201ENST00000374879 DEFB121Q5J5C9 76 aa15.45■□□□□ 0.06
TMEFF1-201ENST00000374879 OPRPNQ99935 248 aaPredicted RBP15.45■□□□□ 0.06
TMEFF1-201ENST00000374879 PPP1R17O96001 155 aa15.45■□□□□ 0.06
TMEFF1-201ENST00000374879 LINC01560Q8TB33 94 aa15.45■□□□□ 0.06
TMEFF1-201ENST00000374879 ZNF580Q9UK33 172 aa15.45■□□□□ 0.06
TMEFF1-201ENST00000374879 C3orf22Q8N5N4 141 aa15.44■□□□□ 0.06
TMEFF1-201ENST00000374879 KLK5Q9Y337 293 aaPredicted RBP15.44■□□□□ 0.06
TMEFF1-201ENST00000374879 METTL26Q96S19 204 aa15.44■□□□□ 0.06
TMEFF1-201ENST00000374879 NBASA2RRP1 2371 aa15.43■□□□□ 0.06
TMEFF1-201ENST00000374879 NPFFO15130 113 aa15.43■□□□□ 0.06
TMEFF1-201ENST00000374879 HERVK_113P63121 156 aa15.43■□□□□ 0.06
TMEFF1-201ENST00000374879 Q6ZSV7 163 aa15.43■□□□□ 0.06
TMEFF1-201ENST00000374879 GNRH2O43555 120 aa15.43■□□□□ 0.06
TMEFF1-201ENST00000374879 POLR2KP53803 58 aaKnown RBP15.43■□□□□ 0.06
TMEFF1-201ENST00000374879 A0A0J9YXY3 114 aa15.42■□□□□ 0.06
TMEFF1-201ENST00000374879 MRPL53Q96EL3 112 aaKnown RBP15.42■□□□□ 0.06
TMEFF1-201ENST00000374879 DPM3Q9P2X0 92 aa15.42■□□□□ 0.06
TMEFF1-201ENST00000374879 DCHS2Q6V1P9 2916 aa15.42■□□□□ 0.06
TMEFF1-201ENST00000374879 ADARB2-AS1A8MUL3 147 aa15.41■□□□□ 0.06
TMEFF1-201ENST00000374879 ASH1LQ9NR48 2969 aaKnown RBP15.41■□□□□ 0.06
TMEFF1-201ENST00000374879 PRSS2P07478 247 aa15.41■□□□□ 0.06
TMEFF1-201ENST00000374879 LINC00315P59091 139 aa15.41■□□□□ 0.06
TMEFF1-201ENST00000374879 SMIM9A6NGZ8 99 aa15.4■□□□□ 0.06
TMEFF1-201ENST00000374879 C15orf32Q32M92 178 aa15.4■□□□□ 0.06
TMEFF1-201ENST00000374879 ZFAND2AQ8N6M9 145 aa15.4■□□□□ 0.06
TMEFF1-201ENST00000374879 FAM19A5Q7Z5A7 132 aaPredicted RBP15.4■□□□□ 0.06
TMEFF1-201ENST00000374879 MUC4Q99102 2169 aa15.4■□□□□ 0.06
TMEFF1-201ENST00000374879 VCYO14598 125 aa15.39■□□□□ 0.05
TMEFF1-201ENST00000374879 C20orf173Q96LM9 149 aa15.39■□□□□ 0.05
TMEFF1-201ENST00000374879 JPT2Q9H910 190 aa15.39■□□□□ 0.05
TMEFF1-201ENST00000374879 TRAV21A0A0B4J279 112 aa15.39■□□□□ 0.05
TMEFF1-201ENST00000374879 RNASE3P12724 160 aaKnown RBP15.39■□□□□ 0.05
TMEFF1-201ENST00000374879 GRNP28799 593 aaKnown RBP15.39■□□□□ 0.05
TMEFF1-201ENST00000374879 C16orf92Q96LL3 132 aa15.39■□□□□ 0.05
TMEFF1-201ENST00000374879 KIF25-AS1Q9Y6Z4 181 aa15.39■□□□□ 0.05
TMEFF1-201ENST00000374879 TLN1Q9Y490 2541 aaKnown RBP15.39■□□□□ 0.05
TMEFF1-201ENST00000374879 IGHV4OR15-8A0A075B7B6 117 aa15.38■□□□□ 0.05
TMEFF1-201ENST00000374879 A0A087WW49 117 aa15.38■□□□□ 0.05
TMEFF1-201ENST00000374879 COX6CP09669 75 aa15.38■□□□□ 0.05
TMEFF1-201ENST00000374879 DEFB1P60022 68 aa15.38■□□□□ 0.05
TMEFF1-201ENST00000374879 EEF1AKMT3Q96AZ1 226 aa15.38■□□□□ 0.05
TMEFF1-201ENST00000374879 IMUPQ9GZP8 106 aa15.38■□□□□ 0.05
TMEFF1-201ENST00000374879 UQCRQO14949 82 aa15.38■□□□□ 0.05
TMEFF1-201ENST00000374879 MUC6Q6W4X9 2439 aa15.37■□□□□ 0.05
TMEFF1-201ENST00000374879 LST1O00453 97 aa15.37■□□□□ 0.05
TMEFF1-201ENST00000374879 SUMO4Q6EEV6 95 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms