RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 ALKAL2Q6UX46 152 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 PRNTQ86SH4 94 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 ZFAND2AQ8N6M9 145 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 SUN5Q8TC36 379 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 RXFP4Q8TDU9 374 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 SFT2D1Q8WV19 159 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 FAM19A4Q96LR4 140 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 LINC00477Q96M19 166 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 ODF3Q96PU9 254 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 ZNF492Q9P255 531 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 NAGKQ9UJ70 344 aa3.04□□□□□ -1.92
PMS1-202ENST00000374826 DNAH1Q9P2D7 4330 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 PLAC8L1A1L4L8 177 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 SMIM9A6NGZ8 99 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 C3orf84H3BNL1 204 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 H7BYZ3 331 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 K7EQM0 130 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 PEX7O00628 323 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 HTN3P15516 51 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 SULT1A2P50226 295 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 TAS2R60P59551 318 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 CCL20P78556 96 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 LINC00242Q5T6M2 205 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 EIF5AL1Q6IS14 154 aaKnown RBP3.03□□□□□ -1.92
PMS1-202ENST00000374826 DPPA3Q6W0C5 159 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 Q86TA4 180 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 TMEM256Q8N2U0 113 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 CYB561D1Q8N8Q1 229 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 TMEM75Q8N9X5 138 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 TMEM263Q8WUH6 116 aaKnown RBP3.03□□□□□ -1.92
PMS1-202ENST00000374826 MBD3L1Q8WWY6 194 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 TVP23CQ96ET8 276 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 C16orf74Q96GX8 76 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 C20orf144Q9BQM9 153 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 NIPSNAP3BQ9BS92 247 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 ATG101Q9BSB4 218 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 NDFIP1Q9BT67 221 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 TREM1Q9NP99 234 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 GNG13Q9P2W3 67 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 EPDR1Q9UM22 224 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 LYSTQ99698 3801 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 DNAH6Q9C0G6 4158 aa3.03□□□□□ -1.92
PMS1-202ENST00000374826 SERTM2A0A1B0GWG4 89 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 FAM168BA1KXE4 195 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 TMEM189A5PLL7 270 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 NUPR2A6NF83 97 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 C11orf94C9JXX5 98 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 ZNF324O75467 553 aaPredicted RBP3.02□□□□□ -1.93
PMS1-202ENST00000374826 SPART-AS1P0CW21 52 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 AKR1C3P42330 323 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 RAB5CP51148 216 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 ZNF80P51504 273 aaPredicted RBP3.02□□□□□ -1.93
PMS1-202ENST00000374826 DAD1P61803 113 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 FLI1Q01543 452 aaPredicted RBP3.02□□□□□ -1.93
PMS1-202ENST00000374826 C12orf74Q32Q52 190 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 NHLRC2Q8NBF2 726 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 RNASE8Q8TDE3 154 aaKnown RBP3.02□□□□□ -1.93
PMS1-202ENST00000374826 PCNPQ8WW12 178 aaKnown RBP3.02□□□□□ -1.93
PMS1-202ENST00000374826 NOP10Q9NPE3 64 aaKnown RBP3.02□□□□□ -1.93
PMS1-202ENST00000374826 MANBALQ9NQG1 85 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 ANAPC11Q9NYG5 84 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 PSG8Q9UQ74 426 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 ARL2-SNX15V9GYD0 113 aa3.02□□□□□ -1.93
PMS1-202ENST00000374826 PLECQ15149 4684 aaKnown RBP3.01□□□□□ -1.93
PMS1-202ENST00000374826 IGHV1OR15-1A0A075B7D0 117 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 TRAV10A0A0B4J240 114 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 TRAV1-1A0A0B4J248 108 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 TRBV7-9A0A0J9YWB2 115 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 TEX46H3BTG2 121 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 GCGP01275 180 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 IFNA1P01562 189 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 NMBP08949 121 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 DEFB130BP0DP73 79 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 DEFB130AP0DP74 79 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 PPT1P50897 306 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 UBE2G1P62253 170 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 TMEM183BQ1AE95 376 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 SMUG1Q53HV7 270 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 Q6AWC8 147 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 CEMP1Q6PRD7 247 aaPredicted RBP3.01□□□□□ -1.93
PMS1-202ENST00000374826 ZNF493Q6ZR52 646 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 Q6ZTI0 123 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 TMEM183AQ8IXX5 376 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 EIF4E3Q8N5X7 224 aaKnown RBP3.01□□□□□ -1.93
PMS1-202ENST00000374826 C11orf72Q8NBR9 251 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 OCC1Q8TAD7 63 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 HIST1H2BAQ96A08 127 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 ZC2HC1AQ96GY0 325 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 DERL1Q9BUN8 251 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 NKX6-2Q9C056 277 aaPredicted RBP3.01□□□□□ -1.93
PMS1-202ENST00000374826 MRPL16Q9NX20 251 aaKnown RBP3.01□□□□□ -1.93
PMS1-202ENST00000374826 KLF12Q9Y4X4 402 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 LENEPQ9Y5L5 61 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 KMT2CQ8NEZ4 4911 aaKnown RBP3.01□□□□□ -1.93
PMS1-202ENST00000374826 HYDINQ4G0P3 5121 aa3.01□□□□□ -1.93
PMS1-202ENST00000374826 SACSQ9NZJ4 4579 aa3□□□□□ -1.93
PMS1-202ENST00000374826 DEFB131BA0A096LNP1 70 aa3□□□□□ -1.93
PMS1-202ENST00000374826 TRGV1A0A0A0MS02 117 aa3□□□□□ -1.93
PMS1-202ENST00000374826 TRAV21A0A0B4J279 112 aa3□□□□□ -1.93
PMS1-202ENST00000374826 TEX48A0A1B0GUV7 120 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms