RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 SS18Q15532 418 aa13.34□□□□□ -0.27
PTPRU-202ENST00000373779 JPT2Q9H910 190 aa13.33□□□□□ -0.28
PTPRU-202ENST00000373779 LY6LH3BQJ8 138 aa13.33□□□□□ -0.28
PTPRU-202ENST00000373779 MUSTN1Q8IVN3 82 aa13.33□□□□□ -0.28
PTPRU-202ENST00000373779 PRSS47A8MTI9 375 aa13.33□□□□□ -0.28
PTPRU-202ENST00000373779 UNQ9165/PRO28630Q6UXU0 137 aa13.32□□□□□ -0.28
PTPRU-202ENST00000373779 PRO3102Q9H379 93 aa13.32□□□□□ -0.28
PTPRU-202ENST00000373779 TEN1Q86WV5 123 aa13.32□□□□□ -0.28
PTPRU-202ENST00000373779 DEFB130BP0DP73 79 aa13.32□□□□□ -0.28
PTPRU-202ENST00000373779 DEFB130AP0DP74 79 aa13.32□□□□□ -0.28
PTPRU-202ENST00000373779 ANKRD29Q8N6D5 301 aa13.31□□□□□ -0.28
PTPRU-202ENST00000373779 FSTL3O95633 263 aa13.31□□□□□ -0.28
PTPRU-202ENST00000373779 Q8N1Y9 231 aa13.31□□□□□ -0.28
PTPRU-202ENST00000373779 ZFHX2Q9C0A1 2572 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-202ENST00000373779 FOXI1Q12951 378 aa13.31□□□□□ -0.28
PTPRU-202ENST00000373779 DNAJC30Q96LL9 226 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 VPREB3Q9UKI3 123 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 GAGE7O76087 117 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 TRBV12-3P01733 135 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 GAGE12FP0CL80 117 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 GAGE12GP0CL81 117 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 GAGE12IP0CL82 117 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 C15orf53Q8NAA6 179 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 RBX1P62877 108 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 K7EMT4 169 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 PFN2P35080 140 aa13.3□□□□□ -0.28
PTPRU-202ENST00000373779 EDA2RQ9HAV5 297 aa13.29□□□□□ -0.28
PTPRU-202ENST00000373779 U3KQE9 123 aa13.29□□□□□ -0.28
PTPRU-202ENST00000373779 GAGE6Q13070 117 aa13.29□□□□□ -0.28
PTPRU-202ENST00000373779 RNF185Q96GF1 192 aa13.29□□□□□ -0.28
PTPRU-202ENST00000373779 C2orf91Q6ZV80 131 aa13.29□□□□□ -0.28
PTPRU-202ENST00000373779 Q9H8V8 135 aa13.29□□□□□ -0.28
PTPRU-202ENST00000373779 SMAD5-AS1Q9Y6J3 95 aa13.29□□□□□ -0.28
PTPRU-202ENST00000373779 IGHV4-30-2A0A087WSY4 118 aa13.28□□□□□ -0.28
PTPRU-202ENST00000373779 PIFOQ8TCI5 191 aa13.28□□□□□ -0.28
PTPRU-202ENST00000373779 LAMTOR3Q9UHA4 124 aa13.28□□□□□ -0.28
PTPRU-202ENST00000373779 IGHG2P01859 326 aa13.28□□□□□ -0.28
PTPRU-202ENST00000373779 TRAV13-2A0A0B4J235 113 aa13.28□□□□□ -0.28
PTPRU-202ENST00000373779 LINC01548A6NM66 108 aa13.28□□□□□ -0.28
PTPRU-202ENST00000373779 IGHG4P01861 327 aa13.27□□□□□ -0.28
PTPRU-202ENST00000373779 TM2D2Q9BX73 214 aa13.27□□□□□ -0.28
PTPRU-202ENST00000373779 IGKV2D-26A0A0A0MRZ7 120 aa13.27□□□□□ -0.28
PTPRU-202ENST00000373779 C9orf153Q5TBE3 101 aa13.27□□□□□ -0.29
PTPRU-202ENST00000373779 DEFB136Q30KP8 78 aa13.26□□□□□ -0.29
PTPRU-202ENST00000373779 C10orf105Q8TEF2 133 aa13.26□□□□□ -0.29
PTPRU-202ENST00000373779 ANKHD1Q8IWZ3 2542 aaKnown RBP13.26□□□□□ -0.29
PTPRU-202ENST00000373779 TTC28Q96AY4 2481 aa13.26□□□□□ -0.29
PTPRU-202ENST00000373779 SOCS3O14543 225 aa13.26□□□□□ -0.29
PTPRU-202ENST00000373779 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
PTPRU-202ENST00000373779 PLXNB1O43157 2135 aa13.26□□□□□ -0.29
PTPRU-202ENST00000373779 ICOSQ9Y6W8 199 aa13.26□□□□□ -0.29
PTPRU-202ENST00000373779 ZFAND3Q9H8U3 227 aa13.26□□□□□ -0.29
PTPRU-202ENST00000373779 LINC01620Q4KN68 170 aa13.25□□□□□ -0.29
PTPRU-202ENST00000373779 GPHB5Q86YW7 130 aa13.25□□□□□ -0.29
PTPRU-202ENST00000373779 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
PTPRU-202ENST00000373779 SLURP1P55000 103 aa13.24□□□□□ -0.29
PTPRU-202ENST00000373779 EBI3Q14213 229 aa13.24□□□□□ -0.29
PTPRU-202ENST00000373779 NEXN-AS1Q8NBZ9 246 aa13.24□□□□□ -0.29
PTPRU-202ENST00000373779 NDUFA11Q86Y39 141 aa13.24□□□□□ -0.29
PTPRU-202ENST00000373779 Q96MF0 132 aa13.24□□□□□ -0.29
PTPRU-202ENST00000373779 SPANXDQ9BXN6 97 aa13.24□□□□□ -0.29
PTPRU-202ENST00000373779 WDR87Q6ZQQ6 2873 aa13.23□□□□□ -0.29
PTPRU-202ENST00000373779 RNF152Q8N8N0 203 aa13.23□□□□□ -0.29
PTPRU-202ENST00000373779 MDFICQ9P1T7 246 aa13.23□□□□□ -0.29
PTPRU-202ENST00000373779 NOTCH3Q9UM47 2321 aa13.23□□□□□ -0.29
PTPRU-202ENST00000373779 APRG1Q8IVJ8 170 aa13.23□□□□□ -0.29
PTPRU-202ENST00000373779 DNAH12Q6ZR08 3092 aa13.23□□□□□ -0.29
PTPRU-202ENST00000373779 SPAG8Q99932 426 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-202ENST00000373779 TANC2Q9HCD6 1990 aa13.22□□□□□ -0.29
PTPRU-202ENST00000373779 IGHV4OR15-8A0A075B7B6 117 aa13.22□□□□□ -0.29
PTPRU-202ENST00000373779 A0A087WW49 117 aa13.22□□□□□ -0.29
PTPRU-202ENST00000373779 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
PTPRU-202ENST00000373779 C20orf203Q8NBC4 194 aa13.22□□□□□ -0.29
PTPRU-202ENST00000373779 CRYBA4P53673 196 aa13.22□□□□□ -0.29
PTPRU-202ENST00000373779 C20orf173Q96LM9 149 aa13.21□□□□□ -0.29
PTPRU-202ENST00000373779 HERV-K104P63124 156 aa13.21□□□□□ -0.29
PTPRU-202ENST00000373779 OPRPNQ99935 248 aaPredicted RBP13.21□□□□□ -0.29
PTPRU-202ENST00000373779 IGF1P05019 195 aa13.21□□□□□ -0.29
PTPRU-202ENST00000373779 SLC25A29Q8N8R3 303 aa13.21□□□□□ -0.29
PTPRU-202ENST00000373779 LMO4P61968 165 aa13.21□□□□□ -0.3
PTPRU-202ENST00000373779 PTH2Q96A98 100 aa13.21□□□□□ -0.3
PTPRU-202ENST00000373779 NOP10Q9NPE3 64 aaKnown RBP13.21□□□□□ -0.3
PTPRU-202ENST00000373779 A0A0J9YX75 114 aa13.21□□□□□ -0.3
PTPRU-202ENST00000373779 A6NDX4 124 aa13.2□□□□□ -0.3
PTPRU-202ENST00000373779 BAALC-AS2P0C853 105 aa13.19□□□□□ -0.3
PTPRU-202ENST00000373779 SPANXB1Q9NS25 103 aaPredicted RBP13.19□□□□□ -0.3
PTPRU-202ENST00000373779 NXPH4O95158 308 aa13.18□□□□□ -0.3
PTPRU-202ENST00000373779 TCL1BO95988 128 aa13.18□□□□□ -0.3
PTPRU-202ENST00000373779 B5MCH6 92 aa13.18□□□□□ -0.3
PTPRU-202ENST00000373779 TNRC6BQ9UPQ9 1833 aaKnown RBP13.18□□□□□ -0.3
PTPRU-202ENST00000373779 TMEM89A2RUT3 159 aa13.17□□□□□ -0.3
PTPRU-202ENST00000373779 TNFRSF13BO14836 293 aaPredicted RBP13.17□□□□□ -0.3
PTPRU-202ENST00000373779 TRBV10-2A0A0K0K1G8 114 aa13.17□□□□□ -0.3
PTPRU-202ENST00000373779 ACYP1P07311 99 aa13.17□□□□□ -0.3
PTPRU-202ENST00000373779 DAND5Q8N907 189 aa13.17□□□□□ -0.3
PTPRU-202ENST00000373779 IGHV1-58A0A0C4DH39 117 aa13.17□□□□□ -0.3
PTPRU-202ENST00000373779 K7EQD1 137 aa13.17□□□□□ -0.3
PTPRU-202ENST00000373779 ZFAND2AQ8N6M9 145 aa13.16□□□□□ -0.3
PTPRU-202ENST00000373779 Q8N6K4 173 aa13.16□□□□□ -0.3
PTPRU-202ENST00000373779 NRACQ8N912 160 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms