RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 SLC25A29Q8N8R3 303 aa8.05□□□□□ -1.12
NUP188-201ENST00000372577 TOMM6Q96B49 74 aa8.05□□□□□ -1.12
NUP188-201ENST00000372577 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.05□□□□□ -1.125e-7■■■■□ 23
NUP188-201ENST00000372577 K7EP13 123 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 RANBP2P49792 3224 aaKnown RBP8.04□□□□□ -1.12
NUP188-201ENST00000372577 SPINK8P0C7L1 97 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 CCDC140Q96MF4 163 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 PCNX3Q9H6A9 2034 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 MUC6Q6W4X9 2439 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 SOCS3O14543 225 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 IGLV2-8P01709 118 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 TTC28Q96AY4 2481 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 A0A0J9YX75 114 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 PFN2P35080 140 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 Q8N1Y9 231 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 MLST8Q9BVC4 326 aa8.04□□□□□ -1.12
NUP188-201ENST00000372577 LGALS9O00182 355 aa8.03□□□□□ -1.12
NUP188-201ENST00000372577 C1orf229Q6ZS94 237 aaPredicted RBP8.03□□□□□ -1.12
NUP188-201ENST00000372577 APRG1Q8IVJ8 170 aa8.03□□□□□ -1.12
NUP188-201ENST00000372577 C22orf34Q6ZV56 151 aa8.03□□□□□ -1.12
NUP188-201ENST00000372577 RPL32P62910 135 aaKnown RBP8.03□□□□□ -1.12
NUP188-201ENST00000372577 ANGP03950 147 aaKnown RBP8.03□□□□□ -1.12
NUP188-201ENST00000372577 PRB1P04280 392 aa8.03□□□□□ -1.12
NUP188-201ENST00000372577 INSL3P51460 131 aa8.02□□□□□ -1.13
NUP188-201ENST00000372577 SPATA12Q7Z6I5 190 aa8.02□□□□□ -1.13
NUP188-201ENST00000372577 CFC1BP0CG36 223 aa8.02□□□□□ -1.13
NUP188-201ENST00000372577 CFC1P0CG37 223 aa8.02□□□□□ -1.13
NUP188-201ENST00000372577 PCP2Q8IVA1 136 aa8.02□□□□□ -1.13
NUP188-201ENST00000372577 MED12LQ86YW9 2145 aa8.02□□□□□ -1.13
NUP188-201ENST00000372577 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.02□□□□□ -1.13
NUP188-201ENST00000372577 IGKV2-29A2NJV5 120 aaPredicted RBP8.02□□□□□ -1.13
NUP188-201ENST00000372577 GAGE2AQ6NT46 116 aa8.02□□□□□ -1.13
NUP188-201ENST00000372577 NKAPP1Q8N9T2 125 aa8.02□□□□□ -1.13
NUP188-201ENST00000372577 UNQ9165/PRO28630Q6UXU0 137 aa8.01□□□□□ -1.13
NUP188-201ENST00000372577 CLPSL1A2RUU4 121 aa8.01□□□□□ -1.13
NUP188-201ENST00000372577 CHD3Q12873 2000 aaKnown RBP8.01□□□□□ -1.13
NUP188-201ENST00000372577 MRPL23Q16540 153 aaKnown RBP8.01□□□□□ -1.13
NUP188-201ENST00000372577 CDPF1Q6NVV7 123 aa8.01□□□□□ -1.13
NUP188-201ENST00000372577 ATP5G1P05496 136 aa8.01□□□□□ -1.13
NUP188-201ENST00000372577 NPSP0C0P6 89 aa8.01□□□□□ -1.13
NUP188-201ENST00000372577 SPART-AS1P0CW21 52 aa8.01□□□□□ -1.13
NUP188-201ENST00000372577 MBD6Q96DN6 1003 aa8.01□□□□□ -1.13
NUP188-201ENST00000372577 COL5A1P20908 1838 aaPredicted RBP8.01□□□□□ -1.13
NUP188-201ENST00000372577 ATP6V0E2Q8NHE4 81 aa8□□□□□ -1.13
NUP188-201ENST00000372577 CREBBPQ92793 2442 aa8□□□□□ -1.13
NUP188-201ENST00000372577 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
NUP188-201ENST00000372577 Q6YL49 198 aa8□□□□□ -1.13
NUP188-201ENST00000372577 LINC00173Q6ZV60 143 aa8□□□□□ -1.13
NUP188-201ENST00000372577 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
NUP188-201ENST00000372577 TRBV7-3A0A075B6L6 115 aa8□□□□□ -1.13
NUP188-201ENST00000372577 IGLC6P0CF74 106 aa8□□□□□ -1.13
NUP188-201ENST00000372577 NRGNQ92686 78 aa8□□□□□ -1.13
NUP188-201ENST00000372577 GTSF1LQ9H1H1 148 aa8□□□□□ -1.13
NUP188-201ENST00000372577 ZMAT4Q9H898 229 aa8□□□□□ -1.13
NUP188-201ENST00000372577 ANKHD1Q8IWZ3 2542 aaKnown RBP8□□□□□ -1.13
NUP188-201ENST00000372577 C11orf86A6NJI1 115 aa8□□□□□ -1.13
NUP188-201ENST00000372577 E9PLD3 99 aa8□□□□□ -1.13
NUP188-201ENST00000372577 Q9H8V8 135 aa8□□□□□ -1.13
NUP188-201ENST00000372577 ICOSQ9Y6W8 199 aa8□□□□□ -1.13
NUP188-201ENST00000372577 TRBV10-1A0A0K0K1A3 114 aa7.99□□□□□ -1.13
NUP188-201ENST00000372577 HIST1H4AP62805 103 aaKnown RBP7.99□□□□□ -1.13
NUP188-201ENST00000372577 BAALCQ8WXS3 180 aa7.99□□□□□ -1.13
NUP188-201ENST00000372577 PLCE1Q9P212 2302 aa7.99□□□□□ -1.13
NUP188-201ENST00000372577 C19orf84I3L1E1 186 aa7.99□□□□□ -1.13
NUP188-201ENST00000372577 ETDBQ3ZM63 59 aa7.99□□□□□ -1.13
NUP188-201ENST00000372577 ABCA1O95477 2261 aa7.99□□□□□ -1.13
NUP188-201ENST00000372577 TRBV12-3P01733 135 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 RNASE13Q5GAN3 156 aaKnown RBP7.98□□□□□ -1.13
NUP188-201ENST00000372577 TMEM263Q8WUH6 116 aaKnown RBP7.98□□□□□ -1.13
NUP188-201ENST00000372577 LAMA3Q16787 3333 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 K7ERJ3 54 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 ARFGEF3Q5TH69 2177 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 Q71RC1 249 aaPredicted RBP7.98□□□□□ -1.13
NUP188-201ENST00000372577 CARD19Q96LW7 228 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 ODF1Q14990 250 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 Q8N6K4 173 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 ZFAND3Q9H8U3 227 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 A0A0J9YXV3 536 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 GYPEP15421 78 aa7.98□□□□□ -1.13
NUP188-201ENST00000372577 TMEM61Q8N0U2 210 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 PIFOQ8TCI5 191 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 H3BMG7 143 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 NXPH4O95158 308 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 IGHV4-31P0DP07 118 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 DNAJC9-AS1A6NH13 148 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 SPRY2O43597 315 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 IGLL5B9A064 214 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 UBL5Q9BZL1 73 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 MAP6D1Q9H9H5 199 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 HTTP42858 3142 aa7.97□□□□□ -1.13
NUP188-201ENST00000372577 TRAV4A0A0B4J268 109 aa7.96□□□□□ -1.13
NUP188-201ENST00000372577 K7EQG2 157 aa7.96□□□□□ -1.13
NUP188-201ENST00000372577 XCL1P47992 114 aa7.96□□□□□ -1.13
NUP188-201ENST00000372577 C20orf203Q8NBC4 194 aa7.96□□□□□ -1.13
NUP188-201ENST00000372577 YPEL4Q96NS1 127 aa7.96□□□□□ -1.13
NUP188-201ENST00000372577 PLA2G5P39877 138 aa7.96□□□□□ -1.13
NUP188-201ENST00000372577 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.13
NUP188-201ENST00000372577 LINC00322Q6ZN03 302 aaPredicted RBP7.96□□□□□ -1.14
NUP188-201ENST00000372577 H0YGX0 51 aa7.96□□□□□ -1.14
NUP188-201ENST00000372577 H3BQ85 93 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms