RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 EDA2RQ9HAV5 297 aa12.15□□□□□ -0.46
SYNCRIP-202ENST00000369622 NRGNQ92686 78 aa12.14□□□□□ -0.47
SYNCRIP-202ENST00000369622 LYRM7Q5U5X0 104 aa12.14□□□□□ -0.47
SYNCRIP-202ENST00000369622 FBXL19-AS1Q494R0 122 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 LINC01559Q495D7 138 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 COX8CQ7Z4L0 72 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 CLPSL1A2RUU4 121 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 F8VRH5 84 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 C11orf71Q6IPW1 123 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 CEMP1Q6PRD7 247 aaPredicted RBP12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 EEF1AKMT3Q96AZ1 226 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 DUX3Q96PT4 197 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 BPESC1Q9GZL8 116 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 SMIM9A6NGZ8 99 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 S100A4P26447 101 aaKnown RBP12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 PLNP26678 52 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 ASIPP42127 132 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 LAGE3Q14657 143 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 PSMG4Q5JS54 123 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 SIRPDQ9H106 197 aa12.13□□□□□ -0.47
SYNCRIP-202ENST00000369622 H7C1H1 209 aa12.12□□□□□ -0.47
SYNCRIP-202ENST00000369622 EBI3Q14213 229 aa12.12□□□□□ -0.47
SYNCRIP-202ENST00000369622 FAM19A5Q7Z5A7 132 aaPredicted RBP12.12□□□□□ -0.47
SYNCRIP-202ENST00000369622 C9orf153Q5TBE3 101 aa12.12□□□□□ -0.47
SYNCRIP-202ENST00000369622 Q8N8P6 123 aa12.12□□□□□ -0.47
SYNCRIP-202ENST00000369622 SCGB3A1Q96QR1 104 aa12.12□□□□□ -0.47
SYNCRIP-202ENST00000369622 NBL1P41271 181 aa12.11□□□□□ -0.47
SYNCRIP-202ENST00000369622 C10orf126Q8N4M7 172 aa12.11□□□□□ -0.47
SYNCRIP-202ENST00000369622 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
SYNCRIP-202ENST00000369622 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
SYNCRIP-202ENST00000369622 IGHV3-11P01762 117 aa12.11□□□□□ -0.47
SYNCRIP-202ENST00000369622 BRD3OSQ6XYD6 125 aa12.11□□□□□ -0.47
SYNCRIP-202ENST00000369622 SBSPONQ8IVN8 264 aa12.11□□□□□ -0.47
SYNCRIP-202ENST00000369622 CREBBPQ92793 2442 aa12.11□□□□□ -0.47
SYNCRIP-202ENST00000369622 CSPG4Q6UVK1 2322 aa12.1□□□□□ -0.47
SYNCRIP-202ENST00000369622 UBE2E1P51965 193 aa12.1□□□□□ -0.47
SYNCRIP-202ENST00000369622 CNFNQ9BYD5 112 aa12.1□□□□□ -0.47
SYNCRIP-202ENST00000369622 MGPP08493 103 aa12.1□□□□□ -0.47
SYNCRIP-202ENST00000369622 MDFICQ9P1T7 246 aa12.1□□□□□ -0.47
SYNCRIP-202ENST00000369622 LY6EQ16553 131 aa12.09□□□□□ -0.47
SYNCRIP-202ENST00000369622 KLRB1Q12918 225 aa12.09□□□□□ -0.47
SYNCRIP-202ENST00000369622 PRR9Q5T870 116 aa12.09□□□□□ -0.47
SYNCRIP-202ENST00000369622 C14orf178Q8N769 122 aaPredicted RBP12.09□□□□□ -0.47
SYNCRIP-202ENST00000369622 TRGV11A0A075B6L2 103 aa12.08□□□□□ -0.47
SYNCRIP-202ENST00000369622 IGHV7-4-1A0A0J9YVY3 117 aa12.08□□□□□ -0.47
SYNCRIP-202ENST00000369622 TRBV12-3P01733 135 aa12.08□□□□□ -0.47
SYNCRIP-202ENST00000369622 PRO1854Q9UHT4 67 aa12.08□□□□□ -0.47
SYNCRIP-202ENST00000369622 IGLV2-18A0A075B6J9 118 aa12.08□□□□□ -0.48
SYNCRIP-202ENST00000369622 F6UB75 175 aa12.08□□□□□ -0.48
SYNCRIP-202ENST00000369622 NPFFO15130 113 aa12.08□□□□□ -0.48
SYNCRIP-202ENST00000369622 SPXQ9BT56 116 aa12.08□□□□□ -0.48
SYNCRIP-202ENST00000369622 TMEM126AQ9H061 195 aa12.08□□□□□ -0.48
SYNCRIP-202ENST00000369622 HERVK_113P63121 156 aa12.07□□□□□ -0.48
SYNCRIP-202ENST00000369622 UNQ9165/PRO28630Q6UXU0 137 aa12.07□□□□□ -0.48
SYNCRIP-202ENST00000369622 RBAKDNA6NC62 111 aa12.07□□□□□ -0.48
SYNCRIP-202ENST00000369622 ZNF22P17026 224 aaPredicted RBP12.07□□□□□ -0.48
SYNCRIP-202ENST00000369622 C20orf173Q96LM9 149 aa12.07□□□□□ -0.48
SYNCRIP-202ENST00000369622 DOPEY2Q9Y3R5 2298 aa12.07□□□□□ -0.48
SYNCRIP-202ENST00000369622 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 HERVK_113P61574 105 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 SRSF2Q01130 221 aaKnown RBP12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 PMVKQ15126 192 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 NRACQ8N912 160 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 DNAJC30Q96LL9 226 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 PHLDA3Q9Y5J5 127 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 VPS13CQ709C8 3753 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 SORL1Q92673 2214 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 TRBV7-1A0A0A6YYK4 115 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 TRAV41A0A0B4J266 112 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 A4D1N5 150 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 RNASE4P34096 147 aaKnown RBP12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 LY6DQ14210 128 aa12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
SYNCRIP-202ENST00000369622 A0A0J9YY99 117 aa12.05□□□□□ -0.48
SYNCRIP-202ENST00000369622 H3BMM0 161 aa12.05□□□□□ -0.48
SYNCRIP-202ENST00000369622 DUSP14O95147 198 aaKnown RBP12.05□□□□□ -0.48
SYNCRIP-202ENST00000369622 LINC01620Q4KN68 170 aa12.05□□□□□ -0.48
SYNCRIP-202ENST00000369622 Q6Q795 121 aa12.05□□□□□ -0.48
SYNCRIP-202ENST00000369622 UBE2WQ96B02 151 aa12.05□□□□□ -0.48
SYNCRIP-202ENST00000369622 C5orf56Q8N8D9 126 aa12.04□□□□□ -0.48
SYNCRIP-202ENST00000369622 TSPEAR-AS2P59090 65 aa12.04□□□□□ -0.48
SYNCRIP-202ENST00000369622 GNRH2O43555 120 aa12.03□□□□□ -0.48
SYNCRIP-202ENST00000369622 EIF4EBP3O60516 100 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-202ENST00000369622 C2orf82Q6UX34 121 aa12.03□□□□□ -0.48
SYNCRIP-202ENST00000369622 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
SYNCRIP-202ENST00000369622 LMO4P61968 165 aa12.03□□□□□ -0.48
SYNCRIP-202ENST00000369622 PSMG3-AS1Q96PY0 264 aa12.03□□□□□ -0.48
SYNCRIP-202ENST00000369622 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
SYNCRIP-202ENST00000369622 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
SYNCRIP-202ENST00000369622 TMEM170BQ5T4T1 132 aa12.03□□□□□ -0.48
SYNCRIP-202ENST00000369622 TRAV25A0A0B4J276 109 aa12.02□□□□□ -0.49
SYNCRIP-202ENST00000369622 SMIM2Q9BVW6 85 aa12.02□□□□□ -0.49
SYNCRIP-202ENST00000369622 C11orf86A6NJI1 115 aa12.02□□□□□ -0.49
SYNCRIP-202ENST00000369622 BAALCQ8WXS3 180 aa12.02□□□□□ -0.49
SYNCRIP-202ENST00000369622 LGALS9O00182 355 aa12.01□□□□□ -0.49
SYNCRIP-202ENST00000369622 NDUFA7O95182 113 aa12.01□□□□□ -0.49
SYNCRIP-202ENST00000369622 SUMO2P61956 95 aaKnown RBP12.01□□□□□ -0.49
SYNCRIP-202ENST00000369622 LINC01619G3V211 115 aa12.01□□□□□ -0.49
SYNCRIP-202ENST00000369622 COX6B1P14854 86 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms