RNA–Protein interactions for RNA: ENST00000362093.4

CKLF-204, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 412 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-204ENST00000362093 Q9UF83 564 aa11.54□□□□□ -0.56
CKLF-204ENST00000362093 A0A087WWL8 130 aa11.53□□□□□ -0.56
CKLF-204ENST00000362093 NDUFS6O75380 124 aaKnown RBP11.53□□□□□ -0.56
CKLF-204ENST00000362093 LINC00694P0DN24 101 aa11.53□□□□□ -0.56
CKLF-204ENST00000362093 BTF3P20290 206 aaKnown RBP11.53□□□□□ -0.56
CKLF-204ENST00000362093 RPS20P60866 119 aaKnown RBP11.53□□□□□ -0.56
CKLF-204ENST00000362093 FAM74A4Q5TZK3 123 aa11.53□□□□□ -0.56
CKLF-204ENST00000362093 OR2D3Q8NGH3 330 aa11.53□□□□□ -0.56
CKLF-204ENST00000362093 DNAH2Q9P225 4427 aa11.53□□□□□ -0.56
CKLF-204ENST00000362093 P01737 135 aa11.52□□□□□ -0.57
CKLF-204ENST00000362093 IGLC6P0CF74 106 aa11.52□□□□□ -0.57
CKLF-204ENST00000362093 WFDC10BQ8IUB3 73 aa11.52□□□□□ -0.57
CKLF-204ENST00000362093 ATP6V0E2Q8NHE4 81 aa11.52□□□□□ -0.57
CKLF-204ENST00000362093 MUC21A0A0G2JKD1 596 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 MUC21A0A140T8X8 626 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 GZMBP10144 247 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 TOR2AQ5JU69 321 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 SPANXN1Q5VSR9 72 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 TEX261Q6UWH6 196 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 NUDT10Q8NFP7 164 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 NUDT11Q96G61 164 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 FAM210AQ96ND0 272 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 GTSF1LQ9H1H1 148 aa11.51□□□□□ -0.57
CKLF-204ENST00000362093 GAGE12JA6NER3 117 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 K7EN84 100 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 DNAH10OSP0CZ25 163 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 TNP2Q05952 138 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 GAGE1Q13065 139 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 GAGE4Q13068 117 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 GAGE5Q13069 117 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 GAGE13Q4V321 117 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 EIF5A2Q9GZV4 153 aaKnown RBP11.5□□□□□ -0.57
CKLF-204ENST00000362093 LY96Q9Y6Y9 160 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 DNAH17Q9UFH2 4485 aa11.5□□□□□ -0.57
CKLF-204ENST00000362093 FAT2Q9NYQ8 4349 aa11.49□□□□□ -0.57
CKLF-204ENST00000362093 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
CKLF-204ENST00000362093 K7EP13 123 aa11.49□□□□□ -0.57
CKLF-204ENST00000362093 LELP1Q5T871 98 aa11.49□□□□□ -0.57
CKLF-204ENST00000362093 FER1L6-AS1Q8NA97 138 aa11.49□□□□□ -0.57
CKLF-204ENST00000362093 TRAV9-2A0A087WT02 112 aa11.48□□□□□ -0.57
CKLF-204ENST00000362093 LINC00315P59091 139 aa11.48□□□□□ -0.57
CKLF-204ENST00000362093 RAB4BP61018 213 aa11.48□□□□□ -0.57
CKLF-204ENST00000362093 SSTP61278 116 aa11.48□□□□□ -0.57
CKLF-204ENST00000362093 RNASE7Q9H1E1 156 aaKnown RBP11.48□□□□□ -0.57
CKLF-204ENST00000362093 KIF25-AS1Q9Y6Z4 181 aa11.48□□□□□ -0.57
CKLF-204ENST00000362093 TRBV10-1A0A0K0K1A3 114 aa11.47□□□□□ -0.57
CKLF-204ENST00000362093 F2Z2F3 143 aa11.47□□□□□ -0.57
CKLF-204ENST00000362093 SRP19P09132 144 aaKnown RBP11.47□□□□□ -0.57
CKLF-204ENST00000362093 TRAV8-6A0A0B4J262 113 aa11.46□□□□□ -0.57
CKLF-204ENST00000362093 IGHV3-38A0A0C4DH36 116 aa11.46□□□□□ -0.57
CKLF-204ENST00000362093 EVI2AP22794 236 aa11.46□□□□□ -0.57
CKLF-204ENST00000362093 CACNG7P62955 275 aa11.46□□□□□ -0.57
CKLF-204ENST00000362093 Q6ZRN7 208 aaPredicted RBP11.46□□□□□ -0.57
CKLF-204ENST00000362093 RPP21Q9H633 154 aaKnown RBP11.46□□□□□ -0.57
CKLF-204ENST00000362093 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.57
CKLF-204ENST00000362093 TNFRSF18Q9Y5U5 241 aa11.46□□□□□ -0.57
CKLF-204ENST00000362093 CEBPGP53567 150 aa11.45□□□□□ -0.58
CKLF-204ENST00000362093 LINC01556Q5JQF7 62 aa11.45□□□□□ -0.58
CKLF-204ENST00000362093 OR10J3Q5JRS4 329 aa11.45□□□□□ -0.58
CKLF-204ENST00000362093 WDR73Q6P4I2 378 aa11.45□□□□□ -0.58
CKLF-204ENST00000362093 LYZL1Q6UWQ5 148 aa11.45□□□□□ -0.58
CKLF-204ENST00000362093 TPPP3Q9BW30 176 aa11.45□□□□□ -0.58
CKLF-204ENST00000362093 TRBV7-3A0A075B6L6 115 aa11.44□□□□□ -0.58
CKLF-204ENST00000362093 FAM231DQ6ZW35 169 aa11.44□□□□□ -0.58
CKLF-204ENST00000362093 OR10G8Q8NGN5 311 aa11.44□□□□□ -0.58
CKLF-204ENST00000362093 HECTD4Q9Y4D8 3996 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 NTF3P20783 257 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 CTRLP40313 264 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 UBE2D3P61077 147 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 UBE2D2P62837 147 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 RPL36AP83881 106 aaKnown RBP11.43□□□□□ -0.58
CKLF-204ENST00000362093 ZNF56Q15929 161 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 C10orf126Q8N4M7 172 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 NEXN-AS1Q8NBZ9 246 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 RPL36ALQ969Q0 106 aaKnown RBP11.43□□□□□ -0.58
CKLF-204ENST00000362093 AP1S3Q96PC3 154 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 SMIM7Q9BQ49 75 aa11.43□□□□□ -0.58
CKLF-204ENST00000362093 A0A087WWC5 75 aa11.42□□□□□ -0.58
CKLF-204ENST00000362093 ZNF727A8MUV8 499 aa11.42□□□□□ -0.58
CKLF-204ENST00000362093 C9JQL5 133 aa11.42□□□□□ -0.58
CKLF-204ENST00000362093 F5H697 171 aa11.42□□□□□ -0.58
CKLF-204ENST00000362093 SMIM17P0DL12 118 aa11.42□□□□□ -0.58
CKLF-204ENST00000362093 LINC01551Q86U37 167 aa11.42□□□□□ -0.58
CKLF-204ENST00000362093 CNFNQ9BYD5 112 aa11.42□□□□□ -0.58
CKLF-204ENST00000362093 GATCO43716 136 aaKnown RBP11.41□□□□□ -0.58
CKLF-204ENST00000362093 NFE4Q86UQ8 179 aa11.41□□□□□ -0.58
CKLF-204ENST00000362093 GTSF1Q8WW33 167 aa11.41□□□□□ -0.58
CKLF-204ENST00000362093 IBA57-AS1B1ANH7 110 aa11.4□□□□□ -0.58
CKLF-204ENST00000362093 ERVFC1-1P60608 527 aa11.4□□□□□ -0.58
CKLF-204ENST00000362093 SRSF3P84103 164 aaKnown RBP11.4□□□□□ -0.58
CKLF-204ENST00000362093 PEA15Q15121 130 aa11.4□□□□□ -0.58
CKLF-204ENST00000362093 A8MWL6 223 aa11.39□□□□□ -0.59
CKLF-204ENST00000362093 IGHV3-30P01768 117 aa11.39□□□□□ -0.59
CKLF-204ENST00000362093 IGHV3-33P01772 117 aa11.39□□□□□ -0.59
CKLF-204ENST00000362093 TRGC1P0CF51 173 aa11.39□□□□□ -0.59
CKLF-204ENST00000362093 IGHV3-30-3P0DP02 117 aa11.39□□□□□ -0.59
CKLF-204ENST00000362093 IGHV3-30-5P0DP03 117 aa11.39□□□□□ -0.59
CKLF-204ENST00000362093 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
CKLF-204ENST00000362093 FAM74A3Q4VXF1 159 aa11.39□□□□□ -0.59
CKLF-204ENST00000362093 CT83Q5H943 113 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms