RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 J3QQQ9 107 aa14.3□□□□□ -0.12
CLIP2-202ENST00000361545 IGLC2P0DOY2 106 aa14.3□□□□□ -0.12
CLIP2-202ENST00000361545 IGLC3P0DOY3 106 aa14.3□□□□□ -0.12
CLIP2-202ENST00000361545 FANCD2OSQ96PS1 177 aa14.3□□□□□ -0.12
CLIP2-202ENST00000361545 TMEM89A2RUT3 159 aa14.3□□□□□ -0.12
CLIP2-202ENST00000361545 UBE2BP63146 152 aa14.3□□□□□ -0.12
CLIP2-202ENST00000361545 TEX48A0A1B0GUV7 120 aa14.29□□□□□ -0.12
CLIP2-202ENST00000361545 F8W735 103 aaPredicted RBP14.29□□□□□ -0.12
CLIP2-202ENST00000361545 FAM167A-AS1Q96KT0 104 aa14.29□□□□□ -0.12
CLIP2-202ENST00000361545 TRAV25A0A0B4J276 109 aa14.28□□□□□ -0.12
CLIP2-202ENST00000361545 ODF3BA8MYP8 253 aa14.27□□□□□ -0.13
CLIP2-202ENST00000361545 ZNF48Q96MX3 618 aaPredicted RBP14.27□□□□□ -0.13
CLIP2-202ENST00000361545 IGLL1P15814 213 aa14.26□□□□□ -0.13
CLIP2-202ENST00000361545 DEFB125Q8N687 156 aa14.26□□□□□ -0.13
CLIP2-202ENST00000361545 AMTNQ6UX39 209 aa14.26□□□□□ -0.13
CLIP2-202ENST00000361545 DSCAMO60469 2012 aa14.25□□□□□ -0.13
CLIP2-202ENST00000361545 LYPD6BQ8NI32 183 aa14.25□□□□□ -0.13
CLIP2-202ENST00000361545 HHLA3Q9XRX5 114 aa14.25□□□□□ -0.13
CLIP2-202ENST00000361545 MED12LQ86YW9 2145 aa14.25□□□□□ -0.13
CLIP2-202ENST00000361545 Q9H8V8 135 aa14.24□□□□□ -0.13
CLIP2-202ENST00000361545 Q6YL49 198 aa14.24□□□□□ -0.13
CLIP2-202ENST00000361545 C9orf47Q6ZRZ4 202 aa14.24□□□□□ -0.13
CLIP2-202ENST00000361545 SORL1Q92673 2214 aa14.24□□□□□ -0.13
CLIP2-202ENST00000361545 TAL2Q16559 108 aa14.24□□□□□ -0.13
CLIP2-202ENST00000361545 PROP1O75360 226 aa14.24□□□□□ -0.13
CLIP2-202ENST00000361545 RPL18AQ02543 176 aaKnown RBP14.24□□□□□ -0.13
CLIP2-202ENST00000361545 CCDC140Q96MF4 163 aa14.23□□□□□ -0.13
CLIP2-202ENST00000361545 K7EP13 123 aa14.23□□□□□ -0.13
CLIP2-202ENST00000361545 BOD1L2Q8IYS8 172 aa14.23□□□□□ -0.13
CLIP2-202ENST00000361545 NAV3Q8IVL0 2385 aa14.22□□□□□ -0.13
CLIP2-202ENST00000361545 COX8AP10176 69 aa14.22□□□□□ -0.13
CLIP2-202ENST00000361545 FGF6P10767 208 aa14.22□□□□□ -0.13
CLIP2-202ENST00000361545 INSL3P51460 131 aa14.22□□□□□ -0.13
CLIP2-202ENST00000361545 RPL32P62910 135 aaKnown RBP14.22□□□□□ -0.13
CLIP2-202ENST00000361545 ETDBQ3ZM63 59 aa14.22□□□□□ -0.13
CLIP2-202ENST00000361545 CDPF1Q6NVV7 123 aa14.22□□□□□ -0.13
CLIP2-202ENST00000361545 CAMK2N2Q96S95 79 aa14.22□□□□□ -0.13
CLIP2-202ENST00000361545 PLA2G2EQ9NZK7 142 aa14.22□□□□□ -0.13
CLIP2-202ENST00000361545 SPANXA1Q9NS26 97 aa14.22□□□□□ -0.13
CLIP2-202ENST00000361545 IGHG4P01861 327 aa14.21□□□□□ -0.13
CLIP2-202ENST00000361545 CHD3Q12873 2000 aaKnown RBP14.21□□□□□ -0.13
CLIP2-202ENST00000361545 KIAA1549LQ6ZVL6 1849 aa14.21□□□□□ -0.13
CLIP2-202ENST00000361545 C9orf118A6NHY6 69 aa14.21□□□□□ -0.13
CLIP2-202ENST00000361545 DAZ2Q13117 558 aaKnown RBP14.21□□□□□ -0.13
CLIP2-202ENST00000361545 DAZ4Q86SG3 579 aaKnown RBP14.21□□□□□ -0.13
CLIP2-202ENST00000361545 SLC25A29Q8N8R3 303 aa14.21□□□□□ -0.13
CLIP2-202ENST00000361545 ZNF747Q9BV97 191 aa14.21□□□□□ -0.13
CLIP2-202ENST00000361545 DAZ3Q9NR90 486 aaKnown RBP14.21□□□□□ -0.13
CLIP2-202ENST00000361545 ZNF106Q9H2Y7 1883 aaKnown RBP14.2□□□□□ -0.14
CLIP2-202ENST00000361545 MAP6D1Q9H9H5 199 aa14.2□□□□□ -0.14
CLIP2-202ENST00000361545 SH2D6Q7Z4S9 175 aa14.2□□□□□ -0.14
CLIP2-202ENST00000361545 ZNF503Q96F45 646 aa14.2□□□□□ -0.14
CLIP2-202ENST00000361545 ZFP2Q6ZN57 461 aa14.2□□□□□ -0.14
CLIP2-202ENST00000361545 PCNX3Q9H6A9 2034 aa14.2□□□□□ -0.14
CLIP2-202ENST00000361545 A0A0J9YX75 114 aa14.19□□□□□ -0.14
CLIP2-202ENST00000361545 K7EMI3 77 aa14.19□□□□□ -0.14
CLIP2-202ENST00000361545 SOCS3O14543 225 aa14.19□□□□□ -0.14
CLIP2-202ENST00000361545 IGLL5B9A064 214 aa14.19□□□□□ -0.14
CLIP2-202ENST00000361545 MDFICQ9P1T7 246 aa14.19□□□□□ -0.14
CLIP2-202ENST00000361545 TRAV13-2A0A0B4J235 113 aa14.19□□□□□ -0.14
CLIP2-202ENST00000361545 C1orf229Q6ZS94 237 aaPredicted RBP14.19□□□□□ -0.14
CLIP2-202ENST00000361545 NDUFA11Q86Y39 141 aa14.19□□□□□ -0.14
CLIP2-202ENST00000361545 PRO1854Q9UHT4 67 aa14.18□□□□□ -0.14
CLIP2-202ENST00000361545 TRBV7-3A0A075B6L6 115 aa14.18□□□□□ -0.14
CLIP2-202ENST00000361545 HIST2H2BDQ6DRA6 164 aa14.18□□□□□ -0.14
CLIP2-202ENST00000361545 CITED1Q99966 193 aa14.18□□□□□ -0.14
CLIP2-202ENST00000361545 LINC00574Q9H8X3 128 aa14.18□□□□□ -0.14
CLIP2-202ENST00000361545 A0A0J9YXV3 536 aa14.18□□□□□ -0.14
CLIP2-202ENST00000361545 C11orf71Q6IPW1 123 aa14.18□□□□□ -0.14
CLIP2-202ENST00000361545 Q6ZPA2 131 aa14.18□□□□□ -0.14
CLIP2-202ENST00000361545 GTSF1Q8WW33 167 aa14.18□□□□□ -0.14
CLIP2-202ENST00000361545 COX7A2LO14548 114 aa14.17□□□□□ -0.14
CLIP2-202ENST00000361545 TRAV4A0A0B4J268 109 aa14.17□□□□□ -0.14
CLIP2-202ENST00000361545 TLN1Q9Y490 2541 aaKnown RBP14.17□□□□□ -0.14
CLIP2-202ENST00000361545 RPL39P62891 51 aaKnown RBP14.16□□□□□ -0.14
CLIP2-202ENST00000361545 WDR87Q6ZQQ6 2873 aa14.16□□□□□ -0.14
CLIP2-202ENST00000361545 TNRC6AQ8NDV7 1962 aaKnown RBP14.16□□□□□ -0.14
CLIP2-202ENST00000361545 IGKV1D-37A0A075B6S9 117 aa14.16□□□□□ -0.14
CLIP2-202ENST00000361545 K7EP34 96 aa14.16□□□□□ -0.14
CLIP2-202ENST00000361545 IGHV4-4A0A075B6R2 117 aa14.16□□□□□ -0.14
CLIP2-202ENST00000361545 K7ERJ3 54 aa14.16□□□□□ -0.14
CLIP2-202ENST00000361545 LY6G6DO95868 133 aa14.16□□□□□ -0.14
CLIP2-202ENST00000361545 BRWD1-AS2P59051 145 aa14.16□□□□□ -0.14
CLIP2-202ENST00000361545 DEFB105AQ8NG35 78 aa14.15□□□□□ -0.14
CLIP2-202ENST00000361545 IGF1P05019 195 aa14.15□□□□□ -0.14
CLIP2-202ENST00000361545 CEND1Q8N111 149 aa14.15□□□□□ -0.14
CLIP2-202ENST00000361545 VSIG2Q96IQ7 327 aa14.15□□□□□ -0.14
CLIP2-202ENST00000361545 KLK5Q9Y337 293 aaPredicted RBP14.15□□□□□ -0.14
CLIP2-202ENST00000361545 Q6ZSV7 163 aa14.14□□□□□ -0.15
CLIP2-202ENST00000361545 C9orf153Q5TBE3 101 aa14.14□□□□□ -0.15
CLIP2-202ENST00000361545 C10orf99Q6UWK7 81 aa14.14□□□□□ -0.15
CLIP2-202ENST00000361545 TMEM263Q8WUH6 116 aaKnown RBP14.14□□□□□ -0.15
CLIP2-202ENST00000361545 KLK12Q9UKR0 248 aa14.14□□□□□ -0.15
CLIP2-202ENST00000361545 CEP192Q8TEP8 1941 aa14.13□□□□□ -0.15
CLIP2-202ENST00000361545 TRBV20-1A0A075B6N2 111 aa14.13□□□□□ -0.15
CLIP2-202ENST00000361545 GAGE12HA6NDE8 117 aa14.13□□□□□ -0.15
CLIP2-202ENST00000361545 CDSNQ15517 529 aa14.13□□□□□ -0.15
CLIP2-202ENST00000361545 BVES-AS1Q5T3Y7 98 aa14.13□□□□□ -0.15
CLIP2-202ENST00000361545 Q6ZVH6 145 aa14.13□□□□□ -0.15
CLIP2-202ENST00000361545 PCP2Q8IVA1 136 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms