RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SPRY4Q9C004 299 aa10.67□□□□□ -0.7
SMC5-201ENST00000361138 ATP5G1P05496 136 aa10.67□□□□□ -0.7
SMC5-201ENST00000361138 OPRPNQ99935 248 aaPredicted RBP10.67□□□□□ -0.7
SMC5-201ENST00000361138 H0YGX0 51 aa10.67□□□□□ -0.7
SMC5-201ENST00000361138 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
SMC5-201ENST00000361138 HOXD3P31249 432 aaPredicted RBP10.67□□□□□ -0.7
SMC5-201ENST00000361138 SP5Q6BEB4 398 aaPredicted RBP10.67□□□□□ -0.7
SMC5-201ENST00000361138 MAP1BP46821 2468 aaKnown RBP10.66□□□□□ -0.7
SMC5-201ENST00000361138 CRYGBP07316 175 aa10.66□□□□□ -0.7
SMC5-201ENST00000361138 MRPL23Q16540 153 aaKnown RBP10.66□□□□□ -0.7
SMC5-201ENST00000361138 MIAQ16674 131 aa10.66□□□□□ -0.7
SMC5-201ENST00000361138 C5orf56Q8N8D9 126 aa10.66□□□□□ -0.7
SMC5-201ENST00000361138 IGHV3-30-3P0DP02 117 aa10.66□□□□□ -0.7
SMC5-201ENST00000361138 DPH3Q96FX2 82 aa10.66□□□□□ -0.7
SMC5-201ENST00000361138 RP1L1Q8IWN7 2480 aaPredicted RBP10.66□□□□□ -0.7
SMC5-201ENST00000361138 NCOA6Q14686 2063 aaPredicted RBP10.65□□□□□ -0.7
SMC5-201ENST00000361138 A0A0J9YXY3 114 aa10.65□□□□□ -0.7
SMC5-201ENST00000361138 SND1-IT1Q9HBX3 110 aa10.65□□□□□ -0.7
SMC5-201ENST00000361138 CFAP126Q5VTH2 177 aa10.65□□□□□ -0.7
SMC5-201ENST00000361138 AJUBAQ96IF1 538 aa10.65□□□□□ -0.7
SMC5-201ENST00000361138 LINC00643Q86TS7 51 aa10.65□□□□□ -0.71
SMC5-201ENST00000361138 C20orf203Q8NBC4 194 aa10.64□□□□□ -0.71
SMC5-201ENST00000361138 A0A0J9YY99 117 aa10.64□□□□□ -0.71
SMC5-201ENST00000361138 DEFB1P60022 68 aa10.64□□□□□ -0.71
SMC5-201ENST00000361138 P0DMU3 169 aa10.64□□□□□ -0.71
SMC5-201ENST00000361138 FAM231AP0DMU4 169 aa10.64□□□□□ -0.71
SMC5-201ENST00000361138 FAM231CP0DMU5 169 aa10.64□□□□□ -0.71
SMC5-201ENST00000361138 RBM3P98179 157 aaKnown RBP10.64□□□□□ -0.71
SMC5-201ENST00000361138 TPRP12270 2363 aaKnown RBP10.63□□□□□ -0.71
SMC5-201ENST00000361138 A0A1W2PNU3 283 aaPredicted RBP10.63□□□□□ -0.71
SMC5-201ENST00000361138 COX7B2Q8TF08 81 aa10.63□□□□□ -0.71
SMC5-201ENST00000361138 TMEM223A0PJW6 202 aa10.62□□□□□ -0.71
SMC5-201ENST00000361138 VSIG2Q96IQ7 327 aa10.62□□□□□ -0.71
SMC5-201ENST00000361138 WISP2O76076 250 aa10.62□□□□□ -0.71
SMC5-201ENST00000361138 K7EQD1 137 aa10.62□□□□□ -0.71
SMC5-201ENST00000361138 ELANEP08246 267 aa10.62□□□□□ -0.71
SMC5-201ENST00000361138 GRNP28799 593 aaKnown RBP10.62□□□□□ -0.71
SMC5-201ENST00000361138 TMEM258P61165 79 aa10.62□□□□□ -0.71
SMC5-201ENST00000361138 TMEM61Q8N0U2 210 aa10.62□□□□□ -0.71
SMC5-201ENST00000361138 SMAD5-AS1Q9Y6J3 95 aa10.61□□□□□ -0.71
SMC5-201ENST00000361138 EP300Q09472 2414 aaPredicted RBP10.61□□□□□ -0.71
SMC5-201ENST00000361138 INSL3P51460 131 aa10.61□□□□□ -0.71
SMC5-201ENST00000361138 RNF152Q8N8N0 203 aa10.61□□□□□ -0.71
SMC5-201ENST00000361138 F8WEM9 126 aa10.61□□□□□ -0.71
SMC5-201ENST00000361138 DAZ2Q13117 558 aaKnown RBP10.61□□□□□ -0.71
SMC5-201ENST00000361138 DAZ4Q86SG3 579 aaKnown RBP10.61□□□□□ -0.71
SMC5-201ENST00000361138 CCDC140Q96MF4 163 aa10.61□□□□□ -0.71
SMC5-201ENST00000361138 DAZ3Q9NR90 486 aaKnown RBP10.61□□□□□ -0.71
SMC5-201ENST00000361138 CLUHP3Q96NS8 147 aa10.61□□□□□ -0.71
SMC5-201ENST00000361138 NOP10Q9NPE3 64 aaKnown RBP10.61□□□□□ -0.71
SMC5-201ENST00000361138 IGHV3-30P01768 117 aa10.6□□□□□ -0.71
SMC5-201ENST00000361138 IGHG2P01859 326 aa10.6□□□□□ -0.71
SMC5-201ENST00000361138 IGHV3-30-5P0DP03 117 aa10.6□□□□□ -0.71
SMC5-201ENST00000361138 XGP55808 180 aa10.6□□□□□ -0.71
SMC5-201ENST00000361138 XCL1P47992 114 aa10.6□□□□□ -0.71
SMC5-201ENST00000361138 DOCK7Q96N67 2140 aa10.6□□□□□ -0.71
SMC5-201ENST00000361138 UQCRQO14949 82 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 CLPSL2Q6UWE3 100 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 TRBV7-3A0A075B6L6 115 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 TRAV25A0A0B4J276 109 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 TRBV30A0A0K0K1B3 111 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 PSMB8P28062 276 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 C3orf22Q8N5N4 141 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 NRACQ8N912 160 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 TRIAP1O43715 76 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 UNQ9165/PRO28630Q6UXU0 137 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 TRAV4A0A0B4J268 109 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 CPAMD8Q8IZJ3 1885 aa10.59□□□□□ -0.71
SMC5-201ENST00000361138 ZNF561-AS1K7EIQ3 104 aa10.58□□□□□ -0.72
SMC5-201ENST00000361138 K7EMT4 169 aa10.58□□□□□ -0.72
SMC5-201ENST00000361138 NCOR1O75376 2440 aa10.58□□□□□ -0.72
SMC5-201ENST00000361138 ODF3BA8MYP8 253 aa10.58□□□□□ -0.72
SMC5-201ENST00000361138 COX7A2LO14548 114 aa10.58□□□□□ -0.72
SMC5-201ENST00000361138 CEMP1Q6PRD7 247 aaPredicted RBP10.58□□□□□ -0.72
SMC5-201ENST00000361138 IGHV3-33P01772 117 aa10.57□□□□□ -0.72
SMC5-201ENST00000361138 ZFP36P26651 326 aaKnown RBP10.57□□□□□ -0.72
SMC5-201ENST00000361138 Q9HAA7 133 aa10.57□□□□□ -0.72
SMC5-201ENST00000361138 TRBV12-3P01733 135 aa10.57□□□□□ -0.72
SMC5-201ENST00000361138 C5orf38Q86SI9 138 aa10.57□□□□□ -0.72
SMC5-201ENST00000361138 LECT2O14960 151 aa10.57□□□□□ -0.72
SMC5-201ENST00000361138 APRG1Q8IVJ8 170 aa10.57□□□□□ -0.72
SMC5-201ENST00000361138 C20orf173Q96LM9 149 aa10.57□□□□□ -0.72
SMC5-201ENST00000361138 MRPS12O15235 138 aaKnown RBP10.57□□□□□ -0.72
SMC5-201ENST00000361138 CCDC179H3BU77 68 aa10.56□□□□□ -0.72
SMC5-201ENST00000361138 ZNF22P17026 224 aaPredicted RBP10.56□□□□□ -0.72
SMC5-201ENST00000361138 DOCK10Q96BY6 2186 aa10.56□□□□□ -0.72
SMC5-201ENST00000361138 J3QLI3 93 aa10.56□□□□□ -0.72
SMC5-201ENST00000361138 IGHV4-38-2P0DP08 117 aa10.56□□□□□ -0.72
SMC5-201ENST00000361138 C14orf132Q9NPU4 83 aa10.56□□□□□ -0.72
SMC5-201ENST00000361138 JMJD7-PLA2G4BH0Y9G9 81 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 SIRPDQ9H106 197 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 BLCAPP62952 87 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 hADV29S1A0JD25 119 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 IGHV4-59P01825 116 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 C1orf43Q9BWL3 253 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 RNF223E7ERA6 249 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 IGF1P05019 195 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 HHLA3Q9XRX5 114 aa10.55□□□□□ -0.72
SMC5-201ENST00000361138 A0A096LPF7 62 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms