RNA–Protein interactions for RNA: ENST00000358173.7

EPHB4-201, Transcript of EPH receptor B4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB4, Length 4,329 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-201ENST00000358173 PMVKQ15126 192 aa12.09□□□□□ -0.47
EPHB4-201ENST00000358173 C12orf74Q32Q52 190 aa12.09□□□□□ -0.47
EPHB4-201ENST00000358173 COPS9Q8WXC6 57 aa12.09□□□□□ -0.47
EPHB4-201ENST00000358173 PLEKHB2Q96CS7 222 aa12.09□□□□□ -0.47
EPHB4-201ENST00000358173 FREM2Q5SZK8 3169 aa12.09□□□□□ -0.47
EPHB4-201ENST00000358173 PRSS29PA6NIE9 313 aa12.09□□□□□ -0.47
EPHB4-201ENST00000358173 LGALS1P09382 135 aaKnown RBP12.09□□□□□ -0.47
EPHB4-201ENST00000358173 ZNF80P51504 273 aaPredicted RBP12.09□□□□□ -0.47
EPHB4-201ENST00000358173 RPL39LQ96EH5 51 aaKnown RBP12.09□□□□□ -0.47
EPHB4-201ENST00000358173 IGHV4OR15-8A0A075B7B6 117 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 A0A087WW49 117 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 IGHV3-16A0A0C4DH30 117 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 A6NDX4 124 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 PHLDA1Q8WV24 401 aaPredicted RBP12.08□□□□□ -0.48
EPHB4-201ENST00000358173 AKAP13Q12802 2813 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 C9JAW5 83 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 INSP01308 110 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 BOD1L2Q8IYS8 172 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 TMEM101Q96IK0 257 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 HIST2H2BDQ6DRA6 164 aa12.08□□□□□ -0.48
EPHB4-201ENST00000358173 MYCNOSP40205 109 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 PTPRBP23467 1997 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 VWC2LB2RUY7 222 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 RNASE1P07998 156 aaKnown RBP12.07□□□□□ -0.48
EPHB4-201ENST00000358173 ZNF415Q09FC8 603 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 TEX48A0A1B0GUV7 120 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 C10orf99Q6UWK7 81 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.07□□□□□ -0.48
EPHB4-201ENST00000358173 M0R2P5 195 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 TSPAN13O95857 204 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 DEFB130BP0DP73 79 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 DEFB130AP0DP74 79 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 CFHR3Q02985 330 aa12.07□□□□□ -0.48
EPHB4-201ENST00000358173 RBAKDNA6NC62 111 aa12.06□□□□□ -0.48
EPHB4-201ENST00000358173 APRG1Q8IVJ8 170 aa12.06□□□□□ -0.48
EPHB4-201ENST00000358173 F8W1H4 67 aa12.06□□□□□ -0.48
EPHB4-201ENST00000358173 C20orf78Q9BR46 151 aa12.06□□□□□ -0.48
EPHB4-201ENST00000358173 TIMM21Q9BVV7 248 aa12.06□□□□□ -0.48
EPHB4-201ENST00000358173 IGHV1OR15-1A0A075B7D0 117 aa12.06□□□□□ -0.48
EPHB4-201ENST00000358173 C16orf54Q6UWD8 224 aa12.06□□□□□ -0.48
EPHB4-201ENST00000358173 SPATA12Q7Z6I5 190 aa12.06□□□□□ -0.48
EPHB4-201ENST00000358173 ANAPC13Q9BS18 74 aa12.06□□□□□ -0.48
EPHB4-201ENST00000358173 KRTAP10-9P60411 292 aa12.05□□□□□ -0.48
EPHB4-201ENST00000358173 TRBV6-1A0A0K0K1D8 114 aa12.05□□□□□ -0.48
EPHB4-201ENST00000358173 SH2D6Q7Z4S9 175 aa12.05□□□□□ -0.48
EPHB4-201ENST00000358173 CCL24O00175 119 aa12.05□□□□□ -0.48
EPHB4-201ENST00000358173 TRPT1Q86TN4 253 aaKnown RBP12.05□□□□□ -0.48
EPHB4-201ENST00000358173 SPINK8P0C7L1 97 aa12.05□□□□□ -0.48
EPHB4-201ENST00000358173 CRIP1P50238 77 aa12.05□□□□□ -0.48
EPHB4-201ENST00000358173 CKS1BP61024 79 aa12.05□□□□□ -0.48
EPHB4-201ENST00000358173 ZNF493Q6ZR52 646 aa12.05□□□□□ -0.48
EPHB4-201ENST00000358173 RAI1Q7Z5J4 1906 aaPredicted RBP12.05□□□□□ -0.48
EPHB4-201ENST00000358173 ODF1Q14990 250 aa12.04□□□□□ -0.48
EPHB4-201ENST00000358173 TAL2Q16559 108 aa12.04□□□□□ -0.48
EPHB4-201ENST00000358173 EBI3Q14213 229 aa12.04□□□□□ -0.48
EPHB4-201ENST00000358173 ZNF625Q96I27 306 aaPredicted RBP12.04□□□□□ -0.48
EPHB4-201ENST00000358173 Q6ZS46 218 aa12.03□□□□□ -0.48
EPHB4-201ENST00000358173 AVPP01185 164 aa12.03□□□□□ -0.48
EPHB4-201ENST00000358173 TRBV7-9A0A0J9YWB2 115 aa12.03□□□□□ -0.48
EPHB4-201ENST00000358173 IGHV4-31P0DP07 118 aa12.03□□□□□ -0.48
EPHB4-201ENST00000358173 GAGE2BQ13066 116 aa12.02□□□□□ -0.48
EPHB4-201ENST00000358173 GAGE2EQ4V326 116 aa12.02□□□□□ -0.48
EPHB4-201ENST00000358173 MRPL53Q96EL3 112 aaKnown RBP12.02□□□□□ -0.48
EPHB4-201ENST00000358173 TMEM141Q96I45 108 aa12.02□□□□□ -0.48
EPHB4-201ENST00000358173 CHCHD5Q9BSY4 110 aa12.02□□□□□ -0.48
EPHB4-201ENST00000358173 GAGE2DQ9UEU5 116 aa12.02□□□□□ -0.48
EPHB4-201ENST00000358173 GAGE12HA6NDE8 117 aa12.02□□□□□ -0.48
EPHB4-201ENST00000358173 LENEPQ9Y5L5 61 aa12.02□□□□□ -0.48
EPHB4-201ENST00000358173 BOD1L1Q8NFC6 3051 aa12.02□□□□□ -0.48
EPHB4-201ENST00000358173 TRAV8-4A0A0B4J246 113 aa12.02□□□□□ -0.49
EPHB4-201ENST00000358173 BBC3Q96PG8 261 aaPredicted RBP12.02□□□□□ -0.49
EPHB4-201ENST00000358173 TRAV13-1A0A0B4J241 112 aa12.02□□□□□ -0.49
EPHB4-201ENST00000358173 IGLL5B9A064 214 aa12.02□□□□□ -0.49
EPHB4-201ENST00000358173 C2orf82Q6UX34 121 aa12.02□□□□□ -0.49
EPHB4-201ENST00000358173 Q8N976 141 aa12.02□□□□□ -0.49
EPHB4-201ENST00000358173 J3QQQ9 107 aa12.01□□□□□ -0.49
EPHB4-201ENST00000358173 C10orf126Q8N4M7 172 aa12.01□□□□□ -0.49
EPHB4-201ENST00000358173 C3orf56Q8N813 242 aa12.01□□□□□ -0.49
EPHB4-201ENST00000358173 IGLV2-11P01706 119 aa12.01□□□□□ -0.49
EPHB4-201ENST00000358173 ADARB2-AS1A8MUL3 147 aa12.01□□□□□ -0.49
EPHB4-201ENST00000358173 AZU1P20160 251 aa12.01□□□□□ -0.49
EPHB4-201ENST00000358173 WFDC2Q14508 124 aa12□□□□□ -0.49
EPHB4-201ENST00000358173 RNASE13Q5GAN3 156 aaKnown RBP12□□□□□ -0.49
EPHB4-201ENST00000358173 ATP6V0BQ99437 205 aa12□□□□□ -0.49
EPHB4-201ENST00000358173 RPL36AP83881 106 aaKnown RBP12□□□□□ -0.49
EPHB4-201ENST00000358173 ZFAND6Q6FIF0 208 aa12□□□□□ -0.49
EPHB4-201ENST00000358173 RPL36ALQ969Q0 106 aaKnown RBP12□□□□□ -0.49
EPHB4-201ENST00000358173 I3L3M4 83 aa11.99□□□□□ -0.49
EPHB4-201ENST00000358173 ATXN8Q156A1 80 aa11.99□□□□□ -0.49
EPHB4-201ENST00000358173 ZNF48Q96MX3 618 aaPredicted RBP11.99□□□□□ -0.49
EPHB4-201ENST00000358173 PRO1854Q9UHT4 67 aa11.99□□□□□ -0.49
EPHB4-201ENST00000358173 IGHV3-38A0A0C4DH36 116 aa11.99□□□□□ -0.49
EPHB4-201ENST00000358173 TRBV20-1A0A075B6N2 111 aa11.99□□□□□ -0.49
EPHB4-201ENST00000358173 FGF6P10767 208 aa11.99□□□□□ -0.49
EPHB4-201ENST00000358173 SCGB1A1P11684 91 aa11.99□□□□□ -0.49
EPHB4-201ENST00000358173 CMC4P56277 68 aaPredicted RBP11.99□□□□□ -0.49
EPHB4-201ENST00000358173 C1QTNF4Q9BXJ3 329 aa11.99□□□□□ -0.49
EPHB4-201ENST00000358173 TNRC18O15417 2968 aaPredicted RBP11.98□□□□□ -0.49
EPHB4-201ENST00000358173 Q8N6K4 173 aa11.98□□□□□ -0.49
EPHB4-201ENST00000358173 MYO15AQ9UKN7 3530 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms