RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ADARB2-AS1A8MUL3 147 aa7.63□□□□□ -1.19
PTPRA-203ENST00000356147 ITLN2Q8WWU7 325 aaPredicted RBP7.63□□□□□ -1.19
PTPRA-203ENST00000356147 NOTCH3Q9UM47 2321 aa7.62□□□□□ -1.19
PTPRA-203ENST00000356147 TRAV41A0A0B4J266 112 aa7.62□□□□□ -1.19
PTPRA-203ENST00000356147 TRAV12-3A0A0B4J271 114 aa7.62□□□□□ -1.19
PTPRA-203ENST00000356147 ANKRD29Q8N6D5 301 aa7.62□□□□□ -1.19
PTPRA-203ENST00000356147 BPESC1Q9GZL8 116 aa7.62□□□□□ -1.19
PTPRA-203ENST00000356147 U3KQE9 123 aa7.62□□□□□ -1.19
PTPRA-203ENST00000356147 SPTBN4Q9H254 2564 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 TRBV7-1A0A0A6YYK4 115 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 TRAV2A0A0B4J234 112 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 SUMO4Q6EEV6 95 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 C9orf139Q6ZV77 190 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 RNF183Q96D59 192 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 LINC00477Q96M19 166 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 TRAV12-2A0A075B6T6 113 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 UBE2D3P61077 147 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 UBE2D2P62837 147 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 ADORA2A-AS1P86434 159 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 C5orf56Q8N8D9 126 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 SDHAF1A6NFY7 115 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 C9JAW5 83 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 C11orf71Q6IPW1 123 aa7.61□□□□□ -1.19
PTPRA-203ENST00000356147 ABCA2Q9BZC7 2435 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 A4D1N5 150 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 OOSP1A8MZH6 123 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 IGHV3-30P01768 117 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 ELANEP08246 267 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 IGHV3-30-5P0DP03 117 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 UBE2E1P51965 193 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 TEN1Q86WV5 123 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 IGIPA6NJ69 53 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 A8MWV9 139 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
PTPRA-203ENST00000356147 PF4V1P10720 104 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 LINC00315P59091 139 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 HERVK_113P61574 105 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 PMVKQ15126 192 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 MRPL53Q96EL3 112 aaKnown RBP7.6□□□□□ -1.19
PTPRA-203ENST00000356147 NACAE9PAV3 2078 aa7.6□□□□□ -1.19
PTPRA-203ENST00000356147 NPFFO15130 113 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 NPC2P61916 151 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 RNASE13Q5GAN3 156 aaKnown RBP7.59□□□□□ -1.19
PTPRA-203ENST00000356147 TCTEX1D4Q5JR98 221 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 C1orf122Q6ZSJ8 110 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 PPDPFLQ8WWR9 84 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 LINC01619G3V211 115 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 IGHV4-39P01824 125 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 HTN1P15515 57 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 Q1RN00 199 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 FAM159AQ6UWV7 190 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 C10orf126Q8N4M7 172 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 RHPN1-AS1Q9BWJ2 59 aa7.59□□□□□ -1.19
PTPRA-203ENST00000356147 J3QQQ9 107 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 ZNF56Q15929 161 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 CFAP161Q6P656 301 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 MDFICQ9P1T7 246 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 KLK9Q9UKQ9 250 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 C2CD3Q4AC94 2353 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 SOCS3O14543 225 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 LGALS3P17931 250 aaKnown RBP7.58□□□□□ -1.2
PTPRA-203ENST00000356147 BLCAPP62952 87 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 PRO1854Q9UHT4 67 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 KIF25-AS1Q9Y6Z4 181 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 IGHV3-73A0A0B4J1V6 119 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 TCF15Q12870 199 aa7.58□□□□□ -1.2
PTPRA-203ENST00000356147 OVOL1O14753 267 aa7.57□□□□□ -1.2
PTPRA-203ENST00000356147 SLC25A29Q8N8R3 303 aa7.57□□□□□ -1.2
PTPRA-203ENST00000356147 A0A0J9YXV3 536 aa7.57□□□□□ -1.2
PTPRA-203ENST00000356147 SLC25A20O43772 301 aa7.57□□□□□ -1.2
PTPRA-203ENST00000356147 ZNF688P0C7X2 276 aa7.57□□□□□ -1.2
PTPRA-203ENST00000356147 POLR2KP53803 58 aaKnown RBP7.57□□□□□ -1.2
PTPRA-203ENST00000356147 Q6ZSV7 163 aa7.57□□□□□ -1.2
PTPRA-203ENST00000356147 MUSTN1Q8IVN3 82 aa7.57□□□□□ -1.2
PTPRA-203ENST00000356147 AMELXQ99217 191 aa7.57□□□□□ -1.2
PTPRA-203ENST00000356147 SS18L2Q9UHA2 77 aa7.57□□□□□ -1.2
PTPRA-203ENST00000356147 CEMP1Q6PRD7 247 aaPredicted RBP7.56□□□□□ -1.2
PTPRA-203ENST00000356147 USP9YO00507 2555 aaPredicted RBP7.56□□□□□ -1.2
PTPRA-203ENST00000356147 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 A8MZ25 164 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 PRM2P04554 102 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 PRSS2P07478 247 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 ATP6V0E2Q8NHE4 81 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 NTN5Q8WTR8 489 aaPredicted RBP7.56□□□□□ -1.2
PTPRA-203ENST00000356147 LENEPQ9Y5L5 61 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 CENPEQ02224 2701 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 ZANQ9Y493 2812 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 VCYO14598 125 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 LMO4P61968 165 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 ANAPC13Q9BS18 74 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 SPXQ9BT56 116 aa7.56□□□□□ -1.2
PTPRA-203ENST00000356147 K7ENP7 123 aa7.55□□□□□ -1.2
PTPRA-203ENST00000356147 CRLF1O75462 422 aa7.55□□□□□ -1.2
PTPRA-203ENST00000356147 P0DMU3 169 aa7.55□□□□□ -1.2
PTPRA-203ENST00000356147 FAM231AP0DMU4 169 aa7.55□□□□□ -1.2
PTPRA-203ENST00000356147 FAM231CP0DMU5 169 aa7.55□□□□□ -1.2
PTPRA-203ENST00000356147 TRAV8-3A0A0A6YYJ7 113 aa7.55□□□□□ -1.2
PTPRA-203ENST00000356147 ZNF876PQ49A33 203 aa7.55□□□□□ -1.2
PTPRA-203ENST00000356147 MOB4Q9Y3A3 225 aa7.55□□□□□ -1.2
PTPRA-203ENST00000356147 UTP20O75691 2785 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms