RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 CNFNQ9BYD5 112 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 SDHAF1A6NFY7 115 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 NDUFA11Q86Y39 141 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 CARD19Q96LW7 228 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 ZNF580Q9UK33 172 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 KLK9Q9UKQ9 250 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 ZNF688P0C7X2 276 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 SCGB1A1P11684 91 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 EDN2P20800 178 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 ZFAND6Q6FIF0 208 aa10.32□□□□□ -0.76
TRIM4-203ENST00000355947 FAM110DQ8TAY7 271 aaPredicted RBP10.32□□□□□ -0.76
TRIM4-203ENST00000355947 SLC25A20O43772 301 aa10.31□□□□□ -0.76
TRIM4-203ENST00000355947 SNCGO76070 127 aa10.31□□□□□ -0.76
TRIM4-203ENST00000355947 JMJD1CQ15652 2540 aa10.31□□□□□ -0.76
TRIM4-203ENST00000355947 TEN1Q86WV5 123 aa10.31□□□□□ -0.76
TRIM4-203ENST00000355947 PIFOQ8TCI5 191 aa10.31□□□□□ -0.76
TRIM4-203ENST00000355947 MUC4Q99102 2169 aa10.3□□□□□ -0.76
TRIM4-203ENST00000355947 J3QQQ9 107 aa10.3□□□□□ -0.76
TRIM4-203ENST00000355947 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
TRIM4-203ENST00000355947 CFC1P0CG37 223 aa10.3□□□□□ -0.76
TRIM4-203ENST00000355947 TTC32Q5I0X7 151 aa10.3□□□□□ -0.76
TRIM4-203ENST00000355947 PRO1854Q9UHT4 67 aa10.3□□□□□ -0.76
TRIM4-203ENST00000355947 ERG28Q9UKR5 140 aa10.3□□□□□ -0.76
TRIM4-203ENST00000355947 A0A0J9YY99 117 aa10.29□□□□□ -0.76
TRIM4-203ENST00000355947 KNCNA6PVL3 124 aa10.29□□□□□ -0.76
TRIM4-203ENST00000355947 DUX5Q96PT3 197 aa10.29□□□□□ -0.76
TRIM4-203ENST00000355947 TRAV41A0A0B4J266 112 aa10.29□□□□□ -0.76
TRIM4-203ENST00000355947 PMVKQ15126 192 aa10.29□□□□□ -0.76
TRIM4-203ENST00000355947 CEMP1Q6PRD7 247 aaPredicted RBP10.29□□□□□ -0.76
TRIM4-203ENST00000355947 GAGE2BQ13066 116 aa10.29□□□□□ -0.76
TRIM4-203ENST00000355947 GAGE2EQ4V326 116 aa10.29□□□□□ -0.76
TRIM4-203ENST00000355947 BPESC1Q9GZL8 116 aa10.29□□□□□ -0.76
TRIM4-203ENST00000355947 GAGE2DQ9UEU5 116 aa10.29□□□□□ -0.76
TRIM4-203ENST00000355947 CCDC168Q8NDH2 2452 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 A0A0J9YXV3 536 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 RBAKDNA6NC62 111 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 PRRC2AP48634 2157 aaKnown RBP10.28□□□□□ -0.76
TRIM4-203ENST00000355947 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 Q6ZSV7 163 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 DAND5Q8N907 189 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 RHPN1-AS1Q9BWJ2 59 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 M0R1W7 72 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 MUSTN1Q8IVN3 82 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 C10orf126Q8N4M7 172 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 LY6G5BQ8NDX9 201 aa10.28□□□□□ -0.76
TRIM4-203ENST00000355947 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
TRIM4-203ENST00000355947 ODF3BA8MYP8 253 aa10.27□□□□□ -0.77
TRIM4-203ENST00000355947 A8MZ25 164 aa10.27□□□□□ -0.77
TRIM4-203ENST00000355947 C9orf139Q6ZV77 190 aa10.27□□□□□ -0.77
TRIM4-203ENST00000355947 TEX49A0A1B0GTD5 131 aa10.27□□□□□ -0.77
TRIM4-203ENST00000355947 TMEM95Q3KNT9 176 aa10.27□□□□□ -0.77
TRIM4-203ENST00000355947 C9orf47Q6ZRZ4 202 aa10.27□□□□□ -0.77
TRIM4-203ENST00000355947 ZNRF2Q8NHG8 242 aa10.27□□□□□ -0.77
TRIM4-203ENST00000355947 TRAV8-3A0A0A6YYJ7 113 aa10.26□□□□□ -0.77
TRIM4-203ENST00000355947 PRM2P04554 102 aa10.26□□□□□ -0.77
TRIM4-203ENST00000355947 ZNF876PQ49A33 203 aa10.26□□□□□ -0.77
TRIM4-203ENST00000355947 CRYGDP07320 174 aa10.26□□□□□ -0.77
TRIM4-203ENST00000355947 SPINK13Q1W4C9 94 aa10.26□□□□□ -0.77
TRIM4-203ENST00000355947 TCTEX1D4Q5JR98 221 aa10.26□□□□□ -0.77
TRIM4-203ENST00000355947 TRAV4A0A0B4J268 109 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 COX8CQ7Z4L0 72 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 MYO18BQ8IUG5 2567 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 TSHBP01222 138 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
TRIM4-203ENST00000355947 ZNF48Q96MX3 618 aaPredicted RBP10.25□□□□□ -0.77
TRIM4-203ENST00000355947 VCX2Q9H322 139 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 MDFICQ9P1T7 246 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 ELANEP08246 267 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 P0DMU3 169 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 FAM231AP0DMU4 169 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 FAM231CP0DMU5 169 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 UBE2D1P51668 147 aa10.25□□□□□ -0.77
TRIM4-203ENST00000355947 VCYO14598 125 aa10.24□□□□□ -0.77
TRIM4-203ENST00000355947 CRLF1O75462 422 aa10.24□□□□□ -0.77
TRIM4-203ENST00000355947 TRBV7-1A0A0A6YYK4 115 aa10.24□□□□□ -0.77
TRIM4-203ENST00000355947 BLCAPP62952 87 aa10.24□□□□□ -0.77
TRIM4-203ENST00000355947 BSNQ9UPA5 3926 aa10.24□□□□□ -0.77
TRIM4-203ENST00000355947 IGLV4-69A0A075B6H9 119 aa10.23□□□□□ -0.77
TRIM4-203ENST00000355947 FN1P02751 2386 aaKnown RBP10.23□□□□□ -0.77
TRIM4-203ENST00000355947 NPFFO15130 113 aa10.23□□□□□ -0.77
TRIM4-203ENST00000355947 AJUBAQ96IF1 538 aa10.23□□□□□ -0.77
TRIM4-203ENST00000355947 CENPVL3A0A0U1RRI6 287 aa10.23□□□□□ -0.77
TRIM4-203ENST00000355947 IGHV3-30P01768 117 aa10.23□□□□□ -0.77
TRIM4-203ENST00000355947 IGHV3-30-5P0DP03 117 aa10.23□□□□□ -0.77
TRIM4-203ENST00000355947 MINOS1Q5TGZ0 78 aa10.23□□□□□ -0.77
TRIM4-203ENST00000355947 CLEC2BQ92478 149 aa10.23□□□□□ -0.77
TRIM4-203ENST00000355947 MINOS1-NBL1R4GNA1 71 aa10.23□□□□□ -0.77
TRIM4-203ENST00000355947 TRAV8-4A0A0B4J246 113 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 IGHV3-38A0A0C4DH36 116 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 OVOL1O14753 267 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 CD28P10747 220 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 SRSF2Q01130 221 aaKnown RBP10.22□□□□□ -0.77
TRIM4-203ENST00000355947 C2orf82Q6UX34 121 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 Q8N6K4 173 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 PSMG3-AS1Q96PY0 264 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 H3BUX3 64 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 SMIM20Q8N5G0 67 aa10.22□□□□□ -0.77
TRIM4-203ENST00000355947 C15orf53Q8NAA6 179 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms