RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 OR10J3Q5JRS4 329 aa11.22□□□□□ -0.61
CTSA-202ENST00000354880 NDUFAF3Q9BU61 184 aa11.22□□□□□ -0.61
CTSA-202ENST00000354880 MRPL16Q9NX20 251 aaKnown RBP11.22□□□□□ -0.61
CTSA-202ENST00000354880 SMKR1H3BMG3 65 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 CRYGDP07320 174 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 MGPP08493 103 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 SNRPEP62304 92 aaKnown RBP11.21□□□□□ -0.61
CTSA-202ENST00000354880 Q0VG73 95 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 FAM74A4Q5TZK3 123 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 OR11H2Q8NH07 326 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 C18orf32Q8TCD1 76 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 RNF183Q96D59 192 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 PRELID3AQ96N28 172 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 SAMD10Q9BYL1 202 aa11.21□□□□□ -0.61
CTSA-202ENST00000354880 NOP10Q9NPE3 64 aaKnown RBP11.21□□□□□ -0.61
CTSA-202ENST00000354880 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.62
CTSA-202ENST00000354880 A8MWV9 139 aa11.21□□□□□ -0.62
CTSA-202ENST00000354880 NCR2O95944 276 aa11.21□□□□□ -0.62
CTSA-202ENST00000354880 LINC00315P59091 139 aa11.21□□□□□ -0.62
CTSA-202ENST00000354880 LGALS9BQ3B8N2 356 aa11.21□□□□□ -0.62
CTSA-202ENST00000354880 MRAP2Q96G30 205 aa11.21□□□□□ -0.62
CTSA-202ENST00000354880 TRAV26-2A0A0B4J265 109 aa11.2□□□□□ -0.62
CTSA-202ENST00000354880 C5orf52A6NGY3 159 aa11.2□□□□□ -0.62
CTSA-202ENST00000354880 PRB2P02812 416 aaPredicted RBP11.2□□□□□ -0.62
CTSA-202ENST00000354880 COA6Q5JTJ3 125 aaKnown RBP11.2□□□□□ -0.62
CTSA-202ENST00000354880 OVOL2Q9BRP0 275 aa11.2□□□□□ -0.62
CTSA-202ENST00000354880 Q6ZTI0 123 aa11.19□□□□□ -0.62
CTSA-202ENST00000354880 BAGE3Q86Y29 109 aa11.19□□□□□ -0.62
CTSA-202ENST00000354880 POM121L12Q8N7R1 296 aa11.19□□□□□ -0.62
CTSA-202ENST00000354880 GAS8-AS1O95177 125 aa11.19□□□□□ -0.62
CTSA-202ENST00000354880 EMP1P54849 157 aa11.19□□□□□ -0.62
CTSA-202ENST00000354880 IQCJQ1A5X6 159 aa11.19□□□□□ -0.62
CTSA-202ENST00000354880 CFAP126Q5VTH2 177 aa11.19□□□□□ -0.62
CTSA-202ENST00000354880 LAMTOR2Q9Y2Q5 125 aa11.19□□□□□ -0.62
CTSA-202ENST00000354880 NACAE9PAV3 2078 aa11.18□□□□□ -0.62
CTSA-202ENST00000354880 F5H697 171 aa11.18□□□□□ -0.62
CTSA-202ENST00000354880 K7EIL1 84 aa11.17□□□□□ -0.62
CTSA-202ENST00000354880 NPYP01303 97 aa11.17□□□□□ -0.62
CTSA-202ENST00000354880 MIFP14174 115 aa11.17□□□□□ -0.62
CTSA-202ENST00000354880 GATA1P15976 413 aaPredicted RBP11.17□□□□□ -0.62
CTSA-202ENST00000354880 HOXA5P20719 270 aa11.17□□□□□ -0.62
CTSA-202ENST00000354880 ZNF56Q15929 161 aa11.17□□□□□ -0.62
CTSA-202ENST00000354880 RS1O15537 224 aa11.16□□□□□ -0.62
CTSA-202ENST00000354880 TNFRSF6BO95407 300 aa11.16□□□□□ -0.62
CTSA-202ENST00000354880 SUMO4Q6EEV6 95 aa11.16□□□□□ -0.62
CTSA-202ENST00000354880 UFSP1Q6NVU6 142 aa11.16□□□□□ -0.62
CTSA-202ENST00000354880 TP53TG1Q9Y2A0 90 aa11.16□□□□□ -0.62
CTSA-202ENST00000354880 RHODO00212 210 aa11.16□□□□□ -0.62
CTSA-202ENST00000354880 SERF1AO75920 110 aa11.16□□□□□ -0.62
CTSA-202ENST00000354880 NRACQ8N912 160 aa11.16□□□□□ -0.62
CTSA-202ENST00000354880 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 IGHV4-28A0A0C4DH34 117 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 GAGE12BA1L429 117 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 GAGE7O76087 117 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 GAGE12FP0CL80 117 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 GAGE12GP0CL81 117 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 GAGE12IP0CL82 117 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 LINC00310P59036 64 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 Q8NAQ8 132 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 OR4C5Q8NGB2 326 aa11.15□□□□□ -0.62
CTSA-202ENST00000354880 TRGV2A0A075B6R0 118 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 TRAV4A0A0B4J268 109 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 ZFP2Q6ZN57 461 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 LOC389332A0A1B0GUA5 103 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 NUPR1O60356 82 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 PPP1R17O96001 155 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 PDZD11Q5EBL8 140 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 DEFB121Q5J5C9 76 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 NIT1Q86X76 327 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 MAP1LC3AQ9H492 121 aa11.14□□□□□ -0.63
CTSA-202ENST00000354880 DEFB4AO15263 64 aa11.13□□□□□ -0.63
CTSA-202ENST00000354880 ESDP10768 282 aa11.13□□□□□ -0.63
CTSA-202ENST00000354880 HIST3H2BBQ8N257 126 aa11.13□□□□□ -0.63
CTSA-202ENST00000354880 PRSS3P2Q8NHM4 247 aa11.13□□□□□ -0.63
CTSA-202ENST00000354880 RPL39LQ96EH5 51 aaKnown RBP11.13□□□□□ -0.63
CTSA-202ENST00000354880 ZNF479Q96JC4 524 aa11.13□□□□□ -0.63
CTSA-202ENST00000354880 RETNQ9HD89 108 aa11.13□□□□□ -0.63
CTSA-202ENST00000354880 LYRM9A8MSI8 78 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 M0QY20 66 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 LINC00614P0C842 121 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 RNASEKQ6P5S7 137 aaKnown RBP11.12□□□□□ -0.63
CTSA-202ENST00000354880 URB1-AS1Q96HZ7 61 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 LOC105371267A0A1B0GV96 52 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 IFI27P40305 119 aaPredicted RBP11.12□□□□□ -0.63
CTSA-202ENST00000354880 FAM222AQ5U5X8 452 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 SBSPONQ8IVN8 264 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 LINC00612Q8N6U2 182 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 EDA2RQ9HAV5 297 aa11.12□□□□□ -0.63
CTSA-202ENST00000354880 PRSS47A8MTI9 375 aa11.11□□□□□ -0.63
CTSA-202ENST00000354880 H7C1H1 209 aa11.11□□□□□ -0.63
CTSA-202ENST00000354880 DEFB130BP0DP73 79 aa11.11□□□□□ -0.63
CTSA-202ENST00000354880 DEFB130AP0DP74 79 aa11.11□□□□□ -0.63
CTSA-202ENST00000354880 S100A2P29034 98 aa11.11□□□□□ -0.63
CTSA-202ENST00000354880 SUMO2P61956 95 aaKnown RBP11.11□□□□□ -0.63
CTSA-202ENST00000354880 CHCHD1Q96BP2 118 aaKnown RBP11.11□□□□□ -0.63
CTSA-202ENST00000354880 C20orf78Q9BR46 151 aa11.11□□□□□ -0.63
CTSA-202ENST00000354880 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
CTSA-202ENST00000354880 CIDEAO60543 219 aa11.1□□□□□ -0.63
CTSA-202ENST00000354880 Q6ZSN1 163 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms