RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 BAALCQ8WXS3 180 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 GRIFINA4D1Z8 144 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 SH2D1AO60880 128 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 FAM74A4Q5TZK3 123 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 NIT1Q86X76 327 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 ZFP30Q9Y2G7 519 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 COX11Q9Y6N1 276 aa9.53□□□□□ -0.88
PRPF40A-201ENST00000354363 AKR1C8PQ5T2L2 129 aa9.52□□□□□ -0.89
PRPF40A-201ENST00000354363 FAM162BQ5T6X4 162 aa9.52□□□□□ -0.89
PRPF40A-201ENST00000354363 SFRP2Q96HF1 295 aa9.52□□□□□ -0.89
PRPF40A-201ENST00000354363 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.89
PRPF40A-201ENST00000354363 A0A087WWL8 130 aa9.51□□□□□ -0.89
PRPF40A-201ENST00000354363 PLA2G1BP04054 148 aaKnown RBP9.51□□□□□ -0.89
PRPF40A-201ENST00000354363 LINC00528Q8N1L1 170 aa9.51□□□□□ -0.89
PRPF40A-201ENST00000354363 RMI2Q96E14 147 aa9.51□□□□□ -0.89
PRPF40A-201ENST00000354363 FMC1Q96HJ9 113 aa9.51□□□□□ -0.89
PRPF40A-201ENST00000354363 PHLDA3Q9Y5J5 127 aa9.51□□□□□ -0.89
PRPF40A-201ENST00000354363 URGCP-MRPS24S4R325 110 aa9.51□□□□□ -0.89
PRPF40A-201ENST00000354363 TPT1P13693 172 aaKnown RBP9.5□□□□□ -0.89
PRPF40A-201ENST00000354363 ZNF674Q2M3X9 581 aa9.5□□□□□ -0.89
PRPF40A-201ENST00000354363 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
PRPF40A-201ENST00000354363 LINC01620Q4KN68 170 aa9.5□□□□□ -0.89
PRPF40A-201ENST00000354363 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
PRPF40A-201ENST00000354363 IGKV2D-24A0A075B6R9 120 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 TMSB15BA0A087X1C1 80 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 MAP1LC3B2A6NCE7 125 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 M0R381 172 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 SEC11BP0C7V7 166 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 UBE2G1P62253 170 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 MAP1LC3BQ9GZQ8 125 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 TRBV6-1A0A0K0K1D8 114 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 G3V3Q6 166 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 J3QL48 77 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 LTAP01374 205 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 Q8N976 141 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 BATF3Q9NR55 127 aa9.49□□□□□ -0.89
PRPF40A-201ENST00000354363 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
PRPF40A-201ENST00000354363 RBFOX3A6NFN3 312 aa9.48□□□□□ -0.89
PRPF40A-201ENST00000354363 FHITP49789 147 aa9.48□□□□□ -0.89
PRPF40A-201ENST00000354363 ZFP82Q8N141 532 aa9.48□□□□□ -0.89
PRPF40A-201ENST00000354363 UBE2WQ96B02 151 aa9.48□□□□□ -0.89
PRPF40A-201ENST00000354363 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
PRPF40A-201ENST00000354363 CYTL1Q9NRR1 136 aa9.48□□□□□ -0.89
PRPF40A-201ENST00000354363 UBE2D3P61077 147 aa9.47□□□□□ -0.89
PRPF40A-201ENST00000354363 UBE2D2P62837 147 aa9.47□□□□□ -0.89
PRPF40A-201ENST00000354363 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
PRPF40A-201ENST00000354363 CST9LP1Q5W188 147 aa9.47□□□□□ -0.89
PRPF40A-201ENST00000354363 SCXQ7RTU7 201 aa9.47□□□□□ -0.89
PRPF40A-201ENST00000354363 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
PRPF40A-201ENST00000354363 TCEAL7Q9BRU2 100 aa9.47□□□□□ -0.89
PRPF40A-201ENST00000354363 A0A087WX48 190 aa9.46□□□□□ -0.89
PRPF40A-201ENST00000354363 AKR1C3P42330 323 aa9.46□□□□□ -0.89
PRPF40A-201ENST00000354363 ELOBQ15370 118 aa9.46□□□□□ -0.89
PRPF40A-201ENST00000354363 ATRAIDQ6UW56 229 aa9.46□□□□□ -0.89
PRPF40A-201ENST00000354363 TRBV7-3A0A075B6L6 115 aa9.45□□□□□ -0.9
PRPF40A-201ENST00000354363 KCNIP4Q6PIL6 250 aa9.45□□□□□ -0.9
PRPF40A-201ENST00000354363 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
PRPF40A-201ENST00000354363 KRTAP29-1A8MX34 341 aaPredicted RBP9.45□□□□□ -0.9
PRPF40A-201ENST00000354363 ARPC5O15511 151 aa9.45□□□□□ -0.9
PRPF40A-201ENST00000354363 OR10G8Q8NGN5 311 aa9.45□□□□□ -0.9
PRPF40A-201ENST00000354363 STOML3Q8TAV4 291 aa9.45□□□□□ -0.9
PRPF40A-201ENST00000354363 PAGE4O60829 102 aa9.44□□□□□ -0.9
PRPF40A-201ENST00000354363 Q0VG73 95 aa9.44□□□□□ -0.9
PRPF40A-201ENST00000354363 CHAC1Q9BUX1 264 aa9.44□□□□□ -0.9
PRPF40A-201ENST00000354363 RAB4BP61018 213 aa9.43□□□□□ -0.9
PRPF40A-201ENST00000354363 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
PRPF40A-201ENST00000354363 NEXN-AS1Q8NBZ9 246 aa9.43□□□□□ -0.9
PRPF40A-201ENST00000354363 OR10AG1Q8NH19 301 aa9.43□□□□□ -0.9
PRPF40A-201ENST00000354363 LRP1Q07954 4544 aaKnown RBP9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 TRBV6-8A0A0A6YYG3 113 aa9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 KRTAP10-4P60372 401 aaPredicted RBP9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 ZNF56Q15929 161 aa9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 PRR27Q6MZM9 219 aa9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 CXCL1P09341 107 aa9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 C1orf43Q9BWL3 253 aa9.42□□□□□ -0.9
PRPF40A-201ENST00000354363 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 PKHD1L1Q86WI1 4243 aa9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 SCO2A0A1W2PP80 73 aa9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 SNAI2O43623 268 aa9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 S100A9P06702 114 aaKnown RBP9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 C14orf177Q52M58 125 aa9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 MPV17L2Q567V2 206 aa9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 C15orf54Q8N8G6 183 aa9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 MBD3L1Q8WWY6 194 aa9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 MLST8Q9BVC4 326 aa9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 ZNF471Q9BX82 626 aaPredicted RBP9.41□□□□□ -0.9
PRPF40A-201ENST00000354363 SMLR1H3BR10 107 aa9.4□□□□□ -0.9
PRPF40A-201ENST00000354363 CRPP02741 224 aa9.4□□□□□ -0.9
PRPF40A-201ENST00000354363 SFT2D1Q8WV19 159 aa9.4□□□□□ -0.9
PRPF40A-201ENST00000354363 SSBP4Q9BWG4 385 aaPredicted RBP9.4□□□□□ -0.9
PRPF40A-201ENST00000354363 MUC21A0A0G2JKD1 596 aa9.39□□□□□ -0.91
PRPF40A-201ENST00000354363 MUC21A0A140T8X8 626 aa9.39□□□□□ -0.91
PRPF40A-201ENST00000354363 A0A1B0GV50 99 aa9.39□□□□□ -0.91
PRPF40A-201ENST00000354363 ANGP03950 147 aaKnown RBP9.39□□□□□ -0.91
PRPF40A-201ENST00000354363 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
PRPF40A-201ENST00000354363 BAGE2Q86Y30 109 aa9.39□□□□□ -0.91
PRPF40A-201ENST00000354363 FAM213BQ8TBF2 198 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms