RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ZNF124Q15973 351 aa10.46□□□□□ -0.74
SMC6-201ENST00000351948 ORAOV1Q8WV07 137 aa10.46□□□□□ -0.74
SMC6-201ENST00000351948 PLEKHB2Q96CS7 222 aa10.46□□□□□ -0.74
SMC6-201ENST00000351948 ANKRD17O75179 2603 aaKnown RBP10.46□□□□□ -0.74
SMC6-201ENST00000351948 MPV17L2Q567V2 206 aa10.45□□□□□ -0.74
SMC6-201ENST00000351948 K7ERU9 68 aa10.45□□□□□ -0.74
SMC6-201ENST00000351948 Q6ZWC4 215 aa10.45□□□□□ -0.74
SMC6-201ENST00000351948 C18orf65Q6ZTR6 163 aa10.45□□□□□ -0.74
SMC6-201ENST00000351948 GTSF1Q8WW33 167 aa10.45□□□□□ -0.74
SMC6-201ENST00000351948 MRPL35Q9NZE8 188 aaKnown RBP10.45□□□□□ -0.74
SMC6-201ENST00000351948 JPT2Q9H910 190 aa10.45□□□□□ -0.74
SMC6-201ENST00000351948 DSCAML1Q8TD84 2053 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 PAX2Q02962 417 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 ZNF664Q8N3J9 261 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 Q9HAA7 133 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 TMEM238C9JI98 176 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 EBI3Q14213 229 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 ESDP10768 282 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 MDFICQ9P1T7 246 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 TMEM89A2RUT3 159 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 PMVKQ15126 192 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 LINC01559Q495D7 138 aa10.44□□□□□ -0.74
SMC6-201ENST00000351948 NXPH4O95158 308 aa10.43□□□□□ -0.74
SMC6-201ENST00000351948 KLF5Q13887 457 aaPredicted RBP10.43□□□□□ -0.74
SMC6-201ENST00000351948 RHOHQ15669 191 aa10.43□□□□□ -0.74
SMC6-201ENST00000351948 GYPEP15421 78 aa10.43□□□□□ -0.74
SMC6-201ENST00000351948 ATG2AQ2TAZ0 1938 aa10.43□□□□□ -0.74
SMC6-201ENST00000351948 COL4A2P08572 1712 aa10.43□□□□□ -0.74
SMC6-201ENST00000351948 SUMO4Q6EEV6 95 aa10.43□□□□□ -0.74
SMC6-201ENST00000351948 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
SMC6-201ENST00000351948 MAP6D1Q9H9H5 199 aa10.43□□□□□ -0.74
SMC6-201ENST00000351948 HSD52Q0P140 79 aa10.42□□□□□ -0.74
SMC6-201ENST00000351948 A0A0J9YX75 114 aa10.42□□□□□ -0.74
SMC6-201ENST00000351948 C9orf47Q6ZRZ4 202 aa10.42□□□□□ -0.74
SMC6-201ENST00000351948 ZNF561-AS1K7EIQ3 104 aa10.42□□□□□ -0.74
SMC6-201ENST00000351948 XCL1P47992 114 aa10.42□□□□□ -0.74
SMC6-201ENST00000351948 GATD1Q8NB37 220 aa10.42□□□□□ -0.74
SMC6-201ENST00000351948 ZNF80P51504 273 aaPredicted RBP10.41□□□□□ -0.74
SMC6-201ENST00000351948 ZNF48Q96MX3 618 aaPredicted RBP10.41□□□□□ -0.74
SMC6-201ENST00000351948 DKK2Q9UBU2 259 aa10.41□□□□□ -0.74
SMC6-201ENST00000351948 POLR3KQ9Y2Y1 108 aaPredicted RBP10.41□□□□□ -0.74
SMC6-201ENST00000351948 SMAD5-AS1Q9Y6J3 95 aa10.41□□□□□ -0.74
SMC6-201ENST00000351948 IGLV10-54A0A075B6I4 117 aa10.41□□□□□ -0.74
SMC6-201ENST00000351948 MYMXA0A1B0GTQ4 84 aa10.41□□□□□ -0.74
SMC6-201ENST00000351948 LINC01006Q8NI28 216 aa10.41□□□□□ -0.74
SMC6-201ENST00000351948 ZNF479Q96JC4 524 aa10.41□□□□□ -0.74
SMC6-201ENST00000351948 CBY1Q9Y3M2 126 aa10.41□□□□□ -0.74
SMC6-201ENST00000351948 TRANK1O15050 2925 aa10.41□□□□□ -0.74
SMC6-201ENST00000351948 LINC00482Q8N8I6 264 aa10.4□□□□□ -0.74
SMC6-201ENST00000351948 ZNF702PQ9H963 129 aa10.4□□□□□ -0.74
SMC6-201ENST00000351948 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.74
SMC6-201ENST00000351948 LINC00322Q6ZN03 302 aaPredicted RBP10.4□□□□□ -0.74
SMC6-201ENST00000351948 ERG28Q9UKR5 140 aa10.4□□□□□ -0.74
SMC6-201ENST00000351948 H3BMM0 161 aa10.4□□□□□ -0.75
SMC6-201ENST00000351948 IGLL1P15814 213 aa10.4□□□□□ -0.75
SMC6-201ENST00000351948 UBE2WQ96B02 151 aa10.4□□□□□ -0.75
SMC6-201ENST00000351948 C16orf74Q96GX8 76 aa10.4□□□□□ -0.75
SMC6-201ENST00000351948 TP53TG3Q9ULZ0 132 aa10.4□□□□□ -0.75
SMC6-201ENST00000351948 SPINK8P0C7L1 97 aa10.39□□□□□ -0.75
SMC6-201ENST00000351948 KLF12Q9Y4X4 402 aa10.39□□□□□ -0.75
SMC6-201ENST00000351948 SLC25A20O43772 301 aa10.39□□□□□ -0.75
SMC6-201ENST00000351948 KIR3DS1Q14943 382 aa10.39□□□□□ -0.75
SMC6-201ENST00000351948 MAJINQ3KP22 176 aa10.39□□□□□ -0.75
SMC6-201ENST00000351948 TMEM141Q96I45 108 aa10.39□□□□□ -0.75
SMC6-201ENST00000351948 C20orf78Q9BR46 151 aa10.39□□□□□ -0.75
SMC6-201ENST00000351948 C20orf173Q96LM9 149 aa10.38□□□□□ -0.75
SMC6-201ENST00000351948 CENPEQ02224 2701 aa10.38□□□□□ -0.75
SMC6-201ENST00000351948 IGKV2D-24A0A075B6R9 120 aa10.38□□□□□ -0.75
SMC6-201ENST00000351948 ATP5G1P05496 136 aa10.38□□□□□ -0.75
SMC6-201ENST00000351948 Q8N6K4 173 aa10.38□□□□□ -0.75
SMC6-201ENST00000351948 TRIOO75962 3097 aa10.38□□□□□ -0.75
SMC6-201ENST00000351948 NUPR1O60356 82 aa10.38□□□□□ -0.75
SMC6-201ENST00000351948 DEFB114Q30KQ6 69 aa10.38□□□□□ -0.75
SMC6-201ENST00000351948 TRAV25A0A0B4J276 109 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 ZNF493Q6ZR52 646 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 LINC00173Q6ZV60 143 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 ZFAND3Q9H8U3 227 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 RAI1Q7Z5J4 1906 aaPredicted RBP10.37□□□□□ -0.75
SMC6-201ENST00000351948 IGHV3-30P01768 117 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 IGHV3-30-3P0DP02 117 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 IGHV3-30-5P0DP03 117 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 SCGB1A1P11684 91 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 NDUFA11Q86Y39 141 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 C5orf38Q86SI9 138 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 EXPH5Q8NEV8 1989 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 PRSS29PA6NIE9 313 aa10.37□□□□□ -0.75
SMC6-201ENST00000351948 SAMD5Q5TGI4 173 aa10.36□□□□□ -0.75
SMC6-201ENST00000351948 GDF5OSQ5U4N7 250 aa10.36□□□□□ -0.75
SMC6-201ENST00000351948 WFDC10AQ9H1F0 79 aa10.36□□□□□ -0.75
SMC6-201ENST00000351948 CPAMD8Q8IZJ3 1885 aa10.36□□□□□ -0.75
SMC6-201ENST00000351948 PSMB8P28062 276 aa10.36□□□□□ -0.75
SMC6-201ENST00000351948 RPL39P62891 51 aaKnown RBP10.36□□□□□ -0.75
SMC6-201ENST00000351948 ADAMTS20P59510 1910 aa10.36□□□□□ -0.75
SMC6-201ENST00000351948 ATP6V0E2Q8NHE4 81 aa10.36□□□□□ -0.75
SMC6-201ENST00000351948 F8VRH5 84 aa10.35□□□□□ -0.75
SMC6-201ENST00000351948 K7EQD1 137 aa10.35□□□□□ -0.75
SMC6-201ENST00000351948 LURAP1LQ8IV03 231 aa10.35□□□□□ -0.75
SMC6-201ENST00000351948 NDUFA12Q9UI09 145 aa10.35□□□□□ -0.75
SMC6-201ENST00000351948 WDFY4Q6ZS81 3184 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms