RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 CRYGDP07320 174 aa13.47□□□□□ -0.25
APP-202ENST00000348990 TSPEAR-AS2P59090 65 aa13.47□□□□□ -0.25
APP-202ENST00000348990 UBE2D3P61077 147 aa13.47□□□□□ -0.25
APP-202ENST00000348990 UBE2D2P62837 147 aa13.47□□□□□ -0.25
APP-202ENST00000348990 ZNF56Q15929 161 aa13.47□□□□□ -0.25
APP-202ENST00000348990 C1orf122Q6ZSJ8 110 aa13.47□□□□□ -0.25
APP-202ENST00000348990 OVOL1O14753 267 aa13.46□□□□□ -0.25
APP-202ENST00000348990 ERG28Q9UKR5 140 aa13.46□□□□□ -0.25
APP-202ENST00000348990 COX6B1P14854 86 aa13.46□□□□□ -0.25
APP-202ENST00000348990 TRAV41A0A0B4J266 112 aa13.46□□□□□ -0.26
APP-202ENST00000348990 SNCGO76070 127 aa13.46□□□□□ -0.26
APP-202ENST00000348990 EBI3Q14213 229 aa13.46□□□□□ -0.26
APP-202ENST00000348990 LY6EQ16553 131 aa13.46□□□□□ -0.26
APP-202ENST00000348990 TRAV12-3A0A0B4J271 114 aa13.45□□□□□ -0.26
APP-202ENST00000348990 ADARB2-AS1A8MUL3 147 aa13.45□□□□□ -0.26
APP-202ENST00000348990 B5MCH6 92 aa13.45□□□□□ -0.26
APP-202ENST00000348990 VCYO14598 125 aa13.45□□□□□ -0.26
APP-202ENST00000348990 PF4V1P10720 104 aa13.45□□□□□ -0.26
APP-202ENST00000348990 CRIP2P52943 208 aaPredicted RBP13.45□□□□□ -0.26
APP-202ENST00000348990 IGLV4-69A0A075B6H9 119 aa13.45□□□□□ -0.26
APP-202ENST00000348990 TMEM262E9PQX1 116 aa13.44□□□□□ -0.26
APP-202ENST00000348990 TSHBP01222 138 aa13.44□□□□□ -0.26
APP-202ENST00000348990 IGHV3-30P01768 117 aa13.44□□□□□ -0.26
APP-202ENST00000348990 IGHV3-30-5P0DP03 117 aa13.44□□□□□ -0.26
APP-202ENST00000348990 SUMO4Q6EEV6 95 aa13.44□□□□□ -0.26
APP-202ENST00000348990 IGF2-ASQ6U949 168 aa13.44□□□□□ -0.26
APP-202ENST00000348990 NTN5Q8WTR8 489 aaPredicted RBP13.44□□□□□ -0.26
APP-202ENST00000348990 RNASE3P12724 160 aaKnown RBP13.44□□□□□ -0.26
APP-202ENST00000348990 GPHB5Q86YW7 130 aa13.44□□□□□ -0.26
APP-202ENST00000348990 HTN1P15515 57 aa13.43□□□□□ -0.26
APP-202ENST00000348990 GAGE2BQ13066 116 aa13.43□□□□□ -0.26
APP-202ENST00000348990 GAGE2EQ4V326 116 aa13.43□□□□□ -0.26
APP-202ENST00000348990 VCX2Q9H322 139 aa13.43□□□□□ -0.26
APP-202ENST00000348990 GAGE2DQ9UEU5 116 aa13.43□□□□□ -0.26
APP-202ENST00000348990 TCF15Q12870 199 aa13.43□□□□□ -0.26
APP-202ENST00000348990 CDSNQ15517 529 aa13.43□□□□□ -0.26
APP-202ENST00000348990 SLC25A29Q8N8R3 303 aa13.43□□□□□ -0.26
APP-202ENST00000348990 ZNRF2Q8NHG8 242 aa13.43□□□□□ -0.26
APP-202ENST00000348990 TTC32Q5I0X7 151 aa13.43□□□□□ -0.26
APP-202ENST00000348990 LENEPQ9Y5L5 61 aa13.43□□□□□ -0.26
APP-202ENST00000348990 MUC6Q6W4X9 2439 aa13.42□□□□□ -0.26
APP-202ENST00000348990 NPC2P61916 151 aa13.42□□□□□ -0.26
APP-202ENST00000348990 CENPVL3A0A0U1RRI6 287 aa13.42□□□□□ -0.26
APP-202ENST00000348990 UBE2E1P51965 193 aa13.42□□□□□ -0.26
APP-202ENST00000348990 BRD3OSQ6XYD6 125 aa13.42□□□□□ -0.26
APP-202ENST00000348990 MUSTN1Q8IVN3 82 aa13.41□□□□□ -0.26
APP-202ENST00000348990 RNF223E7ERA6 249 aa13.4□□□□□ -0.26
APP-202ENST00000348990 RHPN1-AS1Q9BWJ2 59 aa13.4□□□□□ -0.26
APP-202ENST00000348990 MUC4Q99102 2169 aa13.4□□□□□ -0.26
APP-202ENST00000348990 IGIPA6NJ69 53 aa13.4□□□□□ -0.26
APP-202ENST00000348990 ITLN2Q8WWU7 325 aaPredicted RBP13.4□□□□□ -0.26
APP-202ENST00000348990 SPXQ9BT56 116 aa13.4□□□□□ -0.26
APP-202ENST00000348990 SIRPDQ9H106 197 aa13.4□□□□□ -0.26
APP-202ENST00000348990 FOXC1Q12948 553 aa13.4□□□□□ -0.26
APP-202ENST00000348990 TMEM141Q96I45 108 aa13.4□□□□□ -0.26
APP-202ENST00000348990 TRAV12-2A0A075B6T6 113 aa13.39□□□□□ -0.27
APP-202ENST00000348990 IGHV1-69DA0A0B4J2H0 117 aa13.39□□□□□ -0.27
APP-202ENST00000348990 CFAP161Q6P656 301 aa13.39□□□□□ -0.27
APP-202ENST00000348990 U3KQE9 123 aa13.39□□□□□ -0.27
APP-202ENST00000348990 NPFFO15130 113 aa13.39□□□□□ -0.27
APP-202ENST00000348990 A0A0J9YXV3 536 aa13.38□□□□□ -0.27
APP-202ENST00000348990 C5orf56Q8N8D9 126 aa13.38□□□□□ -0.27
APP-202ENST00000348990 C2CD3Q4AC94 2353 aa13.38□□□□□ -0.27
APP-202ENST00000348990 GAGE5Q13069 117 aa13.37□□□□□ -0.27
APP-202ENST00000348990 GAGE6Q13070 117 aa13.37□□□□□ -0.27
APP-202ENST00000348990 NACAE9PAV3 2078 aa13.37□□□□□ -0.27
APP-202ENST00000348990 BPESC1Q9GZL8 116 aa13.37□□□□□ -0.27
APP-202ENST00000348990 TEX49A0A1B0GTD5 131 aa13.36□□□□□ -0.27
APP-202ENST00000348990 IGHV3-33P01772 117 aa13.36□□□□□ -0.27
APP-202ENST00000348990 POLR2KP53803 58 aaKnown RBP13.36□□□□□ -0.27
APP-202ENST00000348990 IGHV3-73A0A0B4J1V6 119 aa13.36□□□□□ -0.27
APP-202ENST00000348990 TRAV4A0A0B4J268 109 aa13.36□□□□□ -0.27
APP-202ENST00000348990 RNASE13Q5GAN3 156 aaKnown RBP13.36□□□□□ -0.27
APP-202ENST00000348990 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
APP-202ENST00000348990 KLK9Q9UKQ9 250 aa13.35□□□□□ -0.27
APP-202ENST00000348990 TRAV8-4A0A0B4J246 113 aa13.35□□□□□ -0.27
APP-202ENST00000348990 ATXN8Q156A1 80 aa13.35□□□□□ -0.27
APP-202ENST00000348990 ZNF876PQ49A33 203 aa13.35□□□□□ -0.27
APP-202ENST00000348990 Q8N1Y9 231 aa13.35□□□□□ -0.27
APP-202ENST00000348990 TIMM17AQ99595 171 aa13.35□□□□□ -0.27
APP-202ENST00000348990 MOB4Q9Y3A3 225 aa13.35□□□□□ -0.27
APP-202ENST00000348990 FAM223BA6NKX1 122 aa13.34□□□□□ -0.27
APP-202ENST00000348990 FAM223AQ8IWN6 122 aa13.34□□□□□ -0.27
APP-202ENST00000348990 NDUFA4O00483 81 aa13.34□□□□□ -0.27
APP-202ENST00000348990 MDFICQ9P1T7 246 aa13.34□□□□□ -0.27
APP-202ENST00000348990 LINC01620Q4KN68 170 aa13.34□□□□□ -0.27
APP-202ENST00000348990 CRLF1O75462 422 aa13.33□□□□□ -0.28
APP-202ENST00000348990 ELANEP08246 267 aa13.33□□□□□ -0.28
APP-202ENST00000348990 EDN2P20800 178 aa13.33□□□□□ -0.28
APP-202ENST00000348990 C2orf82Q6UX34 121 aa13.33□□□□□ -0.28
APP-202ENST00000348990 LINC00315P59091 139 aa13.32□□□□□ -0.28
APP-202ENST00000348990 AJUBAQ96IF1 538 aa13.32□□□□□ -0.28
APP-202ENST00000348990 HIVEP3Q5T1R4 2406 aa13.32□□□□□ -0.28
APP-202ENST00000348990 ID1P41134 155 aa13.32□□□□□ -0.28
APP-202ENST00000348990 LEPROTO15243 131 aa13.32□□□□□ -0.28
APP-202ENST00000348990 C15orf53Q8NAA6 179 aa13.32□□□□□ -0.28
APP-202ENST00000348990 KIF25-AS1Q9Y6Z4 181 aa13.32□□□□□ -0.28
APP-202ENST00000348990 COL12A1Q99715 3063 aa13.31□□□□□ -0.28
APP-202ENST00000348990 IGHV4OR15-8A0A075B7B6 117 aa13.31□□□□□ -0.28
APP-202ENST00000348990 A0A087WW49 117 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms