RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 COX8CQ7Z4L0 72 aa12.29□□□□□ -0.44
MBD1-204ENST00000347968 KIR2DL5BQ8NHK3 375 aa12.29□□□□□ -0.44
MBD1-204ENST00000347968 PRR9Q5T870 116 aa12.29□□□□□ -0.44
MBD1-204ENST00000347968 IGHV1-8P0DP01 117 aa12.28□□□□□ -0.44
MBD1-204ENST00000347968 POM121L12Q8N7R1 296 aa12.28□□□□□ -0.44
MBD1-204ENST00000347968 SMCR5Q8TEV8 140 aa12.28□□□□□ -0.44
MBD1-204ENST00000347968 SPXQ9BT56 116 aa12.28□□□□□ -0.44
MBD1-204ENST00000347968 NDUFB3O43676 98 aa12.28□□□□□ -0.44
MBD1-204ENST00000347968 NSUN5P1Q3KNT7 163 aa12.28□□□□□ -0.44
MBD1-204ENST00000347968 RNF223E7ERA6 249 aa12.27□□□□□ -0.44
MBD1-204ENST00000347968 J3KT08 172 aa12.27□□□□□ -0.44
MBD1-204ENST00000347968 M0R2P5 195 aa12.27□□□□□ -0.44
MBD1-204ENST00000347968 IGF2-ASQ6U949 168 aa12.27□□□□□ -0.44
MBD1-204ENST00000347968 AKAP6Q13023 2319 aa12.27□□□□□ -0.44
MBD1-204ENST00000347968 hADV29S1A0JD25 119 aa12.27□□□□□ -0.45
MBD1-204ENST00000347968 GATA4P43694 442 aa12.27□□□□□ -0.45
MBD1-204ENST00000347968 DUX5Q96PT3 197 aa12.27□□□□□ -0.45
MBD1-204ENST00000347968 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
MBD1-204ENST00000347968 F8W735 103 aaPredicted RBP12.26□□□□□ -0.45
MBD1-204ENST00000347968 P0DMU3 169 aa12.26□□□□□ -0.45
MBD1-204ENST00000347968 FAM231AP0DMU4 169 aa12.26□□□□□ -0.45
MBD1-204ENST00000347968 FAM231CP0DMU5 169 aa12.26□□□□□ -0.45
MBD1-204ENST00000347968 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
MBD1-204ENST00000347968 LOXP28300 417 aaPredicted RBP12.26□□□□□ -0.45
MBD1-204ENST00000347968 DKK4Q9UBT3 224 aa12.26□□□□□ -0.45
MBD1-204ENST00000347968 LRBAP50851 2863 aa12.26□□□□□ -0.45
MBD1-204ENST00000347968 EBI3Q14213 229 aa12.26□□□□□ -0.45
MBD1-204ENST00000347968 METTL26Q96S19 204 aa12.26□□□□□ -0.45
MBD1-204ENST00000347968 TMEM30BQ3MIR4 351 aa12.25□□□□□ -0.45
MBD1-204ENST00000347968 SEM1Q6ZVN7 128 aa12.25□□□□□ -0.45
MBD1-204ENST00000347968 NACAE9PAV3 2078 aa12.25□□□□□ -0.45
MBD1-204ENST00000347968 SLC50A1Q9BRV3 221 aa12.25□□□□□ -0.45
MBD1-204ENST00000347968 JPT2Q9H910 190 aa12.25□□□□□ -0.45
MBD1-204ENST00000347968 MFAP4P55083 255 aa12.24□□□□□ -0.45
MBD1-204ENST00000347968 C4orf26Q17RF5 130 aa12.24□□□□□ -0.45
MBD1-204ENST00000347968 ZNF256Q9Y2P7 627 aaPredicted RBP12.24□□□□□ -0.45
MBD1-204ENST00000347968 IGLV3-9A0A075B6K5 115 aa12.24□□□□□ -0.45
MBD1-204ENST00000347968 TRBV7-7A0A0K0K1E9 115 aa12.24□□□□□ -0.45
MBD1-204ENST00000347968 FANCD2OSQ96PS1 177 aa12.24□□□□□ -0.45
MBD1-204ENST00000347968 GAGE2AQ6NT46 116 aa12.24□□□□□ -0.45
MBD1-204ENST00000347968 C1orf162Q8NEQ5 155 aaPredicted RBP12.24□□□□□ -0.45
MBD1-204ENST00000347968 ICOSQ9Y6W8 199 aa12.24□□□□□ -0.45
MBD1-204ENST00000347968 TLN1Q9Y490 2541 aaKnown RBP12.23□□□□□ -0.45
MBD1-204ENST00000347968 SPTA1P02549 2419 aa12.23□□□□□ -0.45
MBD1-204ENST00000347968 DCHS2Q6V1P9 2916 aa12.23□□□□□ -0.45
MBD1-204ENST00000347968 HRCT1Q6UXD1 115 aa12.23□□□□□ -0.45
MBD1-204ENST00000347968 LINC00311Q8N616 119 aa12.22□□□□□ -0.45
MBD1-204ENST00000347968 DSCR8Q96T75 97 aa12.22□□□□□ -0.45
MBD1-204ENST00000347968 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
MBD1-204ENST00000347968 PTPRQQ9UMZ3 2332 aa12.22□□□□□ -0.45
MBD1-204ENST00000347968 A0A0B4J2C4 111 aa12.22□□□□□ -0.45
MBD1-204ENST00000347968 DAND5Q8N907 189 aa12.22□□□□□ -0.45
MBD1-204ENST00000347968 SPANXA1Q9NS26 97 aa12.22□□□□□ -0.45
MBD1-204ENST00000347968 PRRC2AP48634 2157 aaKnown RBP12.21□□□□□ -0.45
MBD1-204ENST00000347968 NBASA2RRP1 2371 aa12.21□□□□□ -0.45
MBD1-204ENST00000347968 A8MZ25 164 aa12.21□□□□□ -0.45
MBD1-204ENST00000347968 UQCRQO14949 82 aa12.21□□□□□ -0.45
MBD1-204ENST00000347968 FAM27E3Q08E93 113 aa12.21□□□□□ -0.45
MBD1-204ENST00000347968 CHD8Q9HCK8 2581 aa12.21□□□□□ -0.46
MBD1-204ENST00000347968 TMEM223A0PJW6 202 aa12.21□□□□□ -0.46
MBD1-204ENST00000347968 NDPQ00604 133 aa12.21□□□□□ -0.46
MBD1-204ENST00000347968 SRSF2Q01130 221 aaKnown RBP12.21□□□□□ -0.46
MBD1-204ENST00000347968 A0A087WWL8 130 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 IGIPA6NJ69 53 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 LYNX1G3V0Z9 82 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 GNRH2O43555 120 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 LYNX1P0DP58 116 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 FAM215AQ9Y5M1 114 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 ATRXP46100 2492 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 C17orf100A8MU93 164 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 F5H697 171 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 BUB1B-PAK6H3BSN5 160 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 CTSGP08311 255 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.2□□□□□ -0.46
MBD1-204ENST00000347968 A0A0G2JNJ9 132 aa12.19□□□□□ -0.46
MBD1-204ENST00000347968 LINC00526Q96FQ7 95 aa12.19□□□□□ -0.46
MBD1-204ENST00000347968 DPH3P1Q9H4G8 78 aa12.19□□□□□ -0.46
MBD1-204ENST00000347968 Q9UFV3 132 aa12.19□□□□□ -0.46
MBD1-204ENST00000347968 OXTP01178 125 aa12.19□□□□□ -0.46
MBD1-204ENST00000347968 RHOHQ15669 191 aa12.19□□□□□ -0.46
MBD1-204ENST00000347968 ADAMTSL4-AS1Q5T5F5 129 aa12.19□□□□□ -0.46
MBD1-204ENST00000347968 TRBV30A0A0K0K1B3 111 aa12.19□□□□□ -0.46
MBD1-204ENST00000347968 IGFL3Q6UXB1 125 aa12.19□□□□□ -0.46
MBD1-204ENST00000347968 A0A0J9YXV3 536 aa12.18□□□□□ -0.46
MBD1-204ENST00000347968 LRRC75A-AS1Q8N1F1 130 aa12.18□□□□□ -0.46
MBD1-204ENST00000347968 F5H768 121 aa12.18□□□□□ -0.46
MBD1-204ENST00000347968 I3L3M4 83 aa12.18□□□□□ -0.46
MBD1-204ENST00000347968 GPHB5Q86YW7 130 aa12.18□□□□□ -0.46
MBD1-204ENST00000347968 OR13C6PQ8NH95 151 aa12.18□□□□□ -0.46
MBD1-204ENST00000347968 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
MBD1-204ENST00000347968 RNF152Q8N8N0 203 aa12.17□□□□□ -0.46
MBD1-204ENST00000347968 MUC4Q99102 2169 aa12.17□□□□□ -0.46
MBD1-204ENST00000347968 IGKV3-7A0A075B6H7 116 aa12.17□□□□□ -0.46
MBD1-204ENST00000347968 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.17□□□□□ -0.46
MBD1-204ENST00000347968 A0A0J9YXY3 114 aa12.17□□□□□ -0.46
MBD1-204ENST00000347968 TMEM178BH3BS89 294 aa12.17□□□□□ -0.46
MBD1-204ENST00000347968 NCOR2Q9Y618 2525 aa12.17□□□□□ -0.46
MBD1-204ENST00000347968 TRAV13-1A0A0B4J241 112 aa12.17□□□□□ -0.46
MBD1-204ENST00000347968 FAM74A4Q5TZK3 123 aa12.17□□□□□ -0.46
MBD1-204ENST00000347968 IGLV11-55A0A075B6I3 123 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms