RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 ZC2HC1AQ96GY0 325 aa10.9□□□□□ -0.66
CXCL12-201ENST00000343575 HBDP02042 147 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 SCGB1A1P11684 91 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 SHISA2Q6UWI4 295 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 ORMDL3Q8N138 153 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 A0A0J9YX75 114 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 DEFB131AP59861 70 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 ODF3L2Q3SX64 289 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 MAP6D1Q9H9H5 199 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 HIGD1BQ9P298 99 aa10.89□□□□□ -0.67
CXCL12-201ENST00000343575 A0A1W2PPM0 123 aa10.88□□□□□ -0.67
CXCL12-201ENST00000343575 H3BUT2 72 aa10.88□□□□□ -0.67
CXCL12-201ENST00000343575 FABP2P12104 132 aa10.88□□□□□ -0.67
CXCL12-201ENST00000343575 ZNF80P51504 273 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-201ENST00000343575 FAM104BQ5XKR9 115 aa10.88□□□□□ -0.67
CXCL12-201ENST00000343575 PRELID3AQ96N28 172 aa10.88□□□□□ -0.67
CXCL12-201ENST00000343575 OR10J6PQ8NGY7 276 aa10.87□□□□□ -0.67
CXCL12-201ENST00000343575 LINC00477Q96M19 166 aa10.87□□□□□ -0.67
CXCL12-201ENST00000343575 MDFIQ99750 246 aa10.87□□□□□ -0.67
CXCL12-201ENST00000343575 NCR2O95944 276 aa10.87□□□□□ -0.67
CXCL12-201ENST00000343575 IFI27P40305 119 aaPredicted RBP10.87□□□□□ -0.67
CXCL12-201ENST00000343575 BEAN1Q3B7T3 259 aa10.87□□□□□ -0.67
CXCL12-201ENST00000343575 TMEM78Q5T7P6 136 aa10.87□□□□□ -0.67
CXCL12-201ENST00000343575 IFI27L1Q96BM0 104 aa10.87□□□□□ -0.67
CXCL12-201ENST00000343575 MCRIP2Q9BUT9 160 aaKnown RBP10.87□□□□□ -0.67
CXCL12-201ENST00000343575 A0A096LNJ9 63 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 KNCNA6PVL3 124 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 SMIM13P0DJ93 91 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 PRR9Q5T870 116 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 FOXI2Q6ZQN5 318 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 Q6ZQT7 251 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 APRG1Q8IVJ8 170 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 ZFAND2AQ8N6M9 145 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 C19orf73Q9NVV2 129 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 TIMM8BQ9Y5J9 83 aaPredicted RBP10.86□□□□□ -0.67
CXCL12-201ENST00000343575 SPCS1Q9Y6A9 102 aa10.86□□□□□ -0.67
CXCL12-201ENST00000343575 TMEM189A5PLL7 270 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 CD7P09564 240 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 HLA-DRB4P13762 266 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 INSL3P51460 131 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 HLA-DRB4X5D2U9 266 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 D6R8Y8 96 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 CACNG7P62955 275 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 C9orf66Q5T8R8 295 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 AMTNQ6UX39 209 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 ZNF575Q86XF7 245 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 LENEPQ9Y5L5 61 aa10.85□□□□□ -0.67
CXCL12-201ENST00000343575 LINC01546A6NGU7 62 aa10.84□□□□□ -0.67
CXCL12-201ENST00000343575 A8MTW9 85 aa10.84□□□□□ -0.67
CXCL12-201ENST00000343575 PRR31Q5SQ13 230 aa10.84□□□□□ -0.67
CXCL12-201ENST00000343575 RBMY1BA6NDE4 496 aaKnown RBP10.83□□□□□ -0.68
CXCL12-201ENST00000343575 RBMY1EA6NEQ0 496 aaKnown RBP10.83□□□□□ -0.68
CXCL12-201ENST00000343575 H3BMM0 161 aa10.83□□□□□ -0.68
CXCL12-201ENST00000343575 WIPF1O43516 503 aa10.83□□□□□ -0.68
CXCL12-201ENST00000343575 SNAI2O43623 268 aa10.83□□□□□ -0.68
CXCL12-201ENST00000343575 RBMY1DP0C7P1 496 aaKnown RBP10.83□□□□□ -0.68
CXCL12-201ENST00000343575 J3QR89 54 aa10.83□□□□□ -0.68
CXCL12-201ENST00000343575 IGKV3-20P01619 116 aa10.83□□□□□ -0.68
CXCL12-201ENST00000343575 RIPPLY3P57055 190 aa10.83□□□□□ -0.68
CXCL12-201ENST00000343575 SAMD5Q5TGI4 173 aa10.83□□□□□ -0.68
CXCL12-201ENST00000343575 WFDC10AQ9H1F0 79 aa10.83□□□□□ -0.68
CXCL12-201ENST00000343575 TRBV7-9A0A0J9YWB2 115 aa10.82□□□□□ -0.68
CXCL12-201ENST00000343575 KLLNB2CW77 178 aa10.82□□□□□ -0.68
CXCL12-201ENST00000343575 LYZL1Q6UWQ5 148 aa10.82□□□□□ -0.68
CXCL12-201ENST00000343575 C11orf21Q9P2W6 132 aa10.82□□□□□ -0.68
CXCL12-201ENST00000343575 SH2D1AO60880 128 aa10.81□□□□□ -0.68
CXCL12-201ENST00000343575 MRPL51Q4U2R6 128 aaKnown RBP10.81□□□□□ -0.68
CXCL12-201ENST00000343575 FAM110AQ9BQ89 295 aa10.81□□□□□ -0.68
CXCL12-201ENST00000343575 ZMAT4Q9H898 229 aa10.81□□□□□ -0.68
CXCL12-201ENST00000343575 NXT2Q9NPJ8 142 aaKnown RBP10.81□□□□□ -0.68
CXCL12-201ENST00000343575 OR11H12B2RN74 326 aa10.81□□□□□ -0.68
CXCL12-201ENST00000343575 J3KRW8 73 aa10.81□□□□□ -0.68
CXCL12-201ENST00000343575 CKS2P33552 79 aa10.81□□□□□ -0.68
CXCL12-201ENST00000343575 ODF3Q96PU9 254 aa10.81□□□□□ -0.68
CXCL12-201ENST00000343575 LOC389332A0A1B0GUA5 103 aa10.8□□□□□ -0.68
CXCL12-201ENST00000343575 DUSP14O95147 198 aaKnown RBP10.8□□□□□ -0.68
CXCL12-201ENST00000343575 TAL2Q16559 108 aa10.8□□□□□ -0.68
CXCL12-201ENST00000343575 TPPP3Q9BW30 176 aa10.8□□□□□ -0.68
CXCL12-201ENST00000343575 MAP1LC3AQ9H492 121 aa10.8□□□□□ -0.68
CXCL12-201ENST00000343575 PKD1L1Q8TDX9 2849 aa10.79□□□□□ -0.68
CXCL12-201ENST00000343575 ATP5LO75964 103 aa10.79□□□□□ -0.68
CXCL12-201ENST00000343575 EVI2AP22794 236 aa10.79□□□□□ -0.68
CXCL12-201ENST00000343575 NMUP48645 174 aa10.79□□□□□ -0.68
CXCL12-201ENST00000343575 AMN1Q8IY45 258 aa10.79□□□□□ -0.68
CXCL12-201ENST00000343575 FABP5P3A8MUU1 101 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 FCER1GP30273 86 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 SPINK13Q1W4C9 94 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 OXLD1Q5BKU9 147 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 TM2D2Q9BX73 214 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 CMYA5Q8N3K9 4069 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 TRAV12-2A0A075B6T6 113 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 IGKV3D-20A0A0C4DH25 116 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 F8W1H4 67 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
CXCL12-201ENST00000343575 TRPT1Q86TN4 253 aaKnown RBP10.78□□□□□ -0.68
CXCL12-201ENST00000343575 RAB37Q96AX2 223 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 CLUHP3Q96NS8 147 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 ANK2Q01484 3957 aa10.78□□□□□ -0.68
CXCL12-201ENST00000343575 FXYD7P58549 80 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms