RNA–Protein interactions for RNA: ENST00000341627.5

TNFRSF12A-202, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF12A, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-202ENST00000341627 F2Z2F3 143 aa10.66□□□□□ -0.7
TNFRSF12A-202ENST00000341627 IGLC6P0CF74 106 aa10.66□□□□□ -0.7
TNFRSF12A-202ENST00000341627 FAM231DQ6ZW35 169 aa10.66□□□□□ -0.7
TNFRSF12A-202ENST00000341627 MRPS16Q9Y3D3 137 aaKnown RBP10.66□□□□□ -0.7
TNFRSF12A-202ENST00000341627 FAT2Q9NYQ8 4349 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 IGLV2-18A0A075B6J9 118 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 A0A087WWL8 130 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 MUC21A0A0G2JKD1 596 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 MUC21A0A140T8X8 626 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 ERVFC1-1P60608 527 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 CACNG7P62955 275 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 UFSP1Q6NVU6 142 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 LINC01551Q86U37 167 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 UPK3BQ9BT76 320 aa10.65□□□□□ -0.7
TNFRSF12A-202ENST00000341627 LOC100131303A0A0U1RQF7 123 aa10.64□□□□□ -0.71
TNFRSF12A-202ENST00000341627 GATCO43716 136 aaKnown RBP10.64□□□□□ -0.71
TNFRSF12A-202ENST00000341627 CRYGDP07320 174 aa10.64□□□□□ -0.71
TNFRSF12A-202ENST00000341627 SSTP61278 116 aa10.64□□□□□ -0.71
TNFRSF12A-202ENST00000341627 SRSF3P84103 164 aaKnown RBP10.64□□□□□ -0.71
TNFRSF12A-202ENST00000341627 TMEM241Q24JQ0 296 aa10.64□□□□□ -0.71
TNFRSF12A-202ENST00000341627 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
TNFRSF12A-202ENST00000341627 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
TNFRSF12A-202ENST00000341627 C9JQL5 133 aa10.63□□□□□ -0.71
TNFRSF12A-202ENST00000341627 M0R2N4 97 aa10.63□□□□□ -0.71
TNFRSF12A-202ENST00000341627 SMIM17P0DL12 118 aa10.63□□□□□ -0.71
TNFRSF12A-202ENST00000341627 CLLU1Q5K131 121 aa10.63□□□□□ -0.71
TNFRSF12A-202ENST00000341627 Q6ZSN1 163 aa10.63□□□□□ -0.71
TNFRSF12A-202ENST00000341627 Q9H8V8 135 aa10.63□□□□□ -0.71
TNFRSF12A-202ENST00000341627 HECTD4Q9Y4D8 3996 aa10.63□□□□□ -0.71
TNFRSF12A-202ENST00000341627 DNAH17Q9UFH2 4485 aa10.62□□□□□ -0.71
TNFRSF12A-202ENST00000341627 A8MWL6 223 aa10.62□□□□□ -0.71
TNFRSF12A-202ENST00000341627 CTRLP40313 264 aa10.62□□□□□ -0.71
TNFRSF12A-202ENST00000341627 CT83Q5H943 113 aa10.62□□□□□ -0.71
TNFRSF12A-202ENST00000341627 SOHLH1Q5JUK2 328 aa10.62□□□□□ -0.71
TNFRSF12A-202ENST00000341627 LYZL1Q6UWQ5 148 aa10.62□□□□□ -0.71
TNFRSF12A-202ENST00000341627 NAT8Q9UHE5 227 aa10.62□□□□□ -0.71
TNFRSF12A-202ENST00000341627 RAB4BP61018 213 aa10.61□□□□□ -0.71
TNFRSF12A-202ENST00000341627 ZNF56Q15929 161 aa10.61□□□□□ -0.71
TNFRSF12A-202ENST00000341627 WDR73Q6P4I2 378 aa10.61□□□□□ -0.71
TNFRSF12A-202ENST00000341627 C14orf178Q8N769 122 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF12A-202ENST00000341627 C15orf54Q8N8G6 183 aa10.61□□□□□ -0.71
TNFRSF12A-202ENST00000341627 OSTCQ9NRP0 149 aa10.61□□□□□ -0.71
TNFRSF12A-202ENST00000341627 TRBV10-1A0A0K0K1A3 114 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 NBDYA0A0U1RRE5 68 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 GAGE12JA6NER3 117 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 TRGC1P0CF51 173 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 TIRAPP58753 221 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 RPL23P62829 140 aaKnown RBP10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 IFITM2Q01629 132 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 GAGE1Q13065 139 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 GAGE4Q13068 117 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 GAGE5Q13069 117 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 GAGE13Q4V321 117 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 TTC32Q5I0X7 151 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 Q6ZR54 194 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 ATP6V0E2Q8NHE4 81 aa10.6□□□□□ -0.71
TNFRSF12A-202ENST00000341627 F5H697 171 aa10.59□□□□□ -0.71
TNFRSF12A-202ENST00000341627 SIVA1O15304 175 aa10.59□□□□□ -0.71
TNFRSF12A-202ENST00000341627 NTF3P20783 257 aa10.59□□□□□ -0.71
TNFRSF12A-202ENST00000341627 ADIRFQ15847 76 aa10.59□□□□□ -0.71
TNFRSF12A-202ENST00000341627 GTSF1Q8WW33 167 aa10.59□□□□□ -0.71
TNFRSF12A-202ENST00000341627 ISOC2Q96AB3 205 aa10.59□□□□□ -0.71
TNFRSF12A-202ENST00000341627 CNFNQ9BYD5 112 aa10.59□□□□□ -0.71
TNFRSF12A-202ENST00000341627 TWIST1Q15672 202 aa10.58□□□□□ -0.72
TNFRSF12A-202ENST00000341627 BORCS7Q96B45 105 aa10.58□□□□□ -0.72
TNFRSF12A-202ENST00000341627 GTSF1LQ9H1H1 148 aa10.58□□□□□ -0.72
TNFRSF12A-202ENST00000341627 MSRB1Q9NZV6 116 aa10.58□□□□□ -0.72
TNFRSF12A-202ENST00000341627 MGPP08493 103 aa10.57□□□□□ -0.72
TNFRSF12A-202ENST00000341627 LINC00694P0DN24 101 aa10.57□□□□□ -0.72
TNFRSF12A-202ENST00000341627 RPL36AP83881 106 aaKnown RBP10.57□□□□□ -0.72
TNFRSF12A-202ENST00000341627 OR10G8Q8NGN5 311 aa10.57□□□□□ -0.72
TNFRSF12A-202ENST00000341627 TSKUQ8WUA8 353 aa10.57□□□□□ -0.72
TNFRSF12A-202ENST00000341627 RPL36ALQ969Q0 106 aaKnown RBP10.57□□□□□ -0.72
TNFRSF12A-202ENST00000341627 GFRA4Q9GZZ7 299 aa10.57□□□□□ -0.72
TNFRSF12A-202ENST00000341627 KIF25-AS1Q9Y6Z4 181 aa10.57□□□□□ -0.72
TNFRSF12A-202ENST00000341627 TRAV8-6A0A0B4J262 113 aa10.56□□□□□ -0.72
TNFRSF12A-202ENST00000341627 FAM231BA6NCW3 169 aa10.56□□□□□ -0.72
TNFRSF12A-202ENST00000341627 FOXA3P55318 350 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF12A-202ENST00000341627 SMIM15Q7Z3B0 74 aa10.56□□□□□ -0.72
TNFRSF12A-202ENST00000341627 PGLYRP4Q96LB8 373 aa10.56□□□□□ -0.72
TNFRSF12A-202ENST00000341627 DPH3P1Q9H4G8 78 aa10.56□□□□□ -0.72
TNFRSF12A-202ENST00000341627 TRBV7-3A0A075B6L6 115 aa10.55□□□□□ -0.72
TNFRSF12A-202ENST00000341627 H7C1H1 209 aa10.55□□□□□ -0.72
TNFRSF12A-202ENST00000341627 RTL8CO15255 209 aa10.55□□□□□ -0.72
TNFRSF12A-202ENST00000341627 EVI2AP22794 236 aa10.55□□□□□ -0.72
TNFRSF12A-202ENST00000341627 LELP1Q5T871 98 aa10.55□□□□□ -0.72
TNFRSF12A-202ENST00000341627 C1orf134Q5TEV5 83 aa10.55□□□□□ -0.72
TNFRSF12A-202ENST00000341627 Q9UF83 564 aa10.55□□□□□ -0.72
TNFRSF12A-202ENST00000341627 V9GYV3 84 aa10.55□□□□□ -0.72
TNFRSF12A-202ENST00000341627 TRAV9-2A0A087WT02 112 aa10.54□□□□□ -0.72
TNFRSF12A-202ENST00000341627 A0A087WWC5 75 aa10.54□□□□□ -0.72
TNFRSF12A-202ENST00000341627 HIGD1CA8MV81 97 aa10.54□□□□□ -0.72
TNFRSF12A-202ENST00000341627 LINC00315P59091 139 aa10.54□□□□□ -0.72
TNFRSF12A-202ENST00000341627 OR10J3Q5JRS4 329 aa10.54□□□□□ -0.72
TNFRSF12A-202ENST00000341627 LINC00336Q6ZUF6 198 aa10.54□□□□□ -0.72
TNFRSF12A-202ENST00000341627 WFDC10BQ8IUB3 73 aa10.54□□□□□ -0.72
TNFRSF12A-202ENST00000341627 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF12A-202ENST00000341627 K7EP13 123 aa10.53□□□□□ -0.72
TNFRSF12A-202ENST00000341627 UBE2D3P61077 147 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms