RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 ZNF415Q09FC8 603 aa15.36■□□□□ 0.05
VRK2-201ENST00000340157 PMCHL1Q16048 86 aa15.36■□□□□ 0.05
VRK2-201ENST00000340157 ZNF876PQ49A33 203 aa15.36■□□□□ 0.05
VRK2-201ENST00000340157 MORN3Q6PF18 240 aaPredicted RBP15.36■□□□□ 0.05
VRK2-201ENST00000340157 TMEM158Q8WZ71 300 aa15.36■□□□□ 0.05
VRK2-201ENST00000340157 MRAP2Q96G30 205 aa15.36■□□□□ 0.05
VRK2-201ENST00000340157 LAMTOR2Q9Y2Q5 125 aa15.36■□□□□ 0.05
VRK2-201ENST00000340157 PKD1L1Q8TDX9 2849 aa15.36■□□□□ 0.05
VRK2-201ENST00000340157 MGPP08493 103 aa15.35■□□□□ 0.05
VRK2-201ENST00000340157 SYT8Q8NBV8 401 aa15.35■□□□□ 0.05
VRK2-201ENST00000340157 CRYGDP07320 174 aa15.34■□□□□ 0.05
VRK2-201ENST00000340157 PRSS3P2Q8NHM4 247 aa15.34■□□□□ 0.05
VRK2-201ENST00000340157 C12orf57Q99622 126 aa15.34■□□□□ 0.05
VRK2-201ENST00000340157 IGHV1-24A0A0C4DH33 117 aa15.33■□□□□ 0.05
VRK2-201ENST00000340157 CDPF1Q6NVV7 123 aa15.33■□□□□ 0.05
VRK2-201ENST00000340157 IL17DQ8TAD2 202 aa15.33■□□□□ 0.05
VRK2-201ENST00000340157 RNASE8Q8TDE3 154 aaKnown RBP15.33■□□□□ 0.05
VRK2-201ENST00000340157 RASL10AQ92737 203 aa15.33■□□□□ 0.05
VRK2-201ENST00000340157 M0R2P5 195 aa15.33■□□□□ 0.04
VRK2-201ENST00000340157 C1QTNF4Q9BXJ3 329 aa15.33■□□□□ 0.04
VRK2-201ENST00000340157 MAP1LC3AQ9H492 121 aa15.32■□□□□ 0.04
VRK2-201ENST00000340157 AP5S1Q9NUS5 200 aa15.32■□□□□ 0.04
VRK2-201ENST00000340157 SMIM17P0DL12 118 aa15.31■□□□□ 0.04
VRK2-201ENST00000340157 OXLD1Q5BKU9 147 aa15.31■□□□□ 0.04
VRK2-201ENST00000340157 ZNF705AQ6ZN79 300 aaPredicted RBP15.31■□□□□ 0.04
VRK2-201ENST00000340157 FA2HQ7L5A8 372 aa15.31■□□□□ 0.04
VRK2-201ENST00000340157 PTH2Q96A98 100 aa15.31■□□□□ 0.04
VRK2-201ENST00000340157 RPL39LQ96EH5 51 aaKnown RBP15.31■□□□□ 0.04
VRK2-201ENST00000340157 GOLT1BQ9Y3E0 138 aa15.31■□□□□ 0.04
VRK2-201ENST00000340157 IGLV2-18A0A075B6J9 118 aa15.31■□□□□ 0.04
VRK2-201ENST00000340157 JOSD1Q15040 202 aaPredicted RBP15.31■□□□□ 0.04
VRK2-201ENST00000340157 FAM74A4Q5TZK3 123 aa15.31■□□□□ 0.04
VRK2-201ENST00000340157 CSTL1Q9H114 145 aa15.31■□□□□ 0.04
VRK2-201ENST00000340157 PRSS47A8MTI9 375 aa15.3■□□□□ 0.04
VRK2-201ENST00000340157 SUMO4Q6EEV6 95 aa15.3■□□□□ 0.04
VRK2-201ENST00000340157 A0A096LNJ9 63 aa15.29■□□□□ 0.04
VRK2-201ENST00000340157 SPXQ9BT56 116 aa15.29■□□□□ 0.04
VRK2-201ENST00000340157 PLAC8L1A1L4L8 177 aa15.29■□□□□ 0.04
VRK2-201ENST00000340157 LINC01546A6NGU7 62 aa15.29■□□□□ 0.04
VRK2-201ENST00000340157 PIK3CD-AS1Q5SR53 167 aa15.29■□□□□ 0.04
VRK2-201ENST00000340157 TMEM263Q8WUH6 116 aaKnown RBP15.29■□□□□ 0.04
VRK2-201ENST00000340157 MRPL16Q9NX20 251 aaKnown RBP15.29■□□□□ 0.04
VRK2-201ENST00000340157 ANK2Q01484 3957 aa15.28■□□□□ 0.04
VRK2-201ENST00000340157 UFSP1Q6NVU6 142 aa15.28■□□□□ 0.04
VRK2-201ENST00000340157 LINC00173Q6ZV60 143 aa15.27■□□□□ 0.03
VRK2-201ENST00000340157 KRTAP10-11P60412 298 aa15.26■□□□□ 0.03
VRK2-201ENST00000340157 Q8N8P6 123 aa15.26■□□□□ 0.03
VRK2-201ENST00000340157 NXT2Q9NPJ8 142 aaKnown RBP15.26■□□□□ 0.03
VRK2-201ENST00000340157 F5H697 171 aa15.25■□□□□ 0.03
VRK2-201ENST00000340157 C3orf79P0CE67 100 aa15.25■□□□□ 0.03
VRK2-201ENST00000340157 SUMO2P61956 95 aaKnown RBP15.25■□□□□ 0.03
VRK2-201ENST00000340157 ZNF56Q15929 161 aa15.25■□□□□ 0.03
VRK2-201ENST00000340157 CFAP126Q5VTH2 177 aa15.25■□□□□ 0.03
VRK2-201ENST00000340157 SMIM2Q9BVW6 85 aa15.25■□□□□ 0.03
VRK2-201ENST00000340157 A8MWV9 139 aa15.24■□□□□ 0.03
VRK2-201ENST00000340157 M0QY20 66 aa15.24■□□□□ 0.03
VRK2-201ENST00000340157 Q8N976 141 aa15.24■□□□□ 0.03
VRK2-201ENST00000340157 C20orf78Q9BR46 151 aa15.24■□□□□ 0.03
VRK2-201ENST00000340157 IGHV3-73A0A0B4J1V6 119 aa15.23■□□□□ 0.03
VRK2-201ENST00000340157 KRTDAPP60985 99 aa15.23■□□□□ 0.03
VRK2-201ENST00000340157 C16orf74Q96GX8 76 aa15.23■□□□□ 0.03
VRK2-201ENST00000340157 NIT2Q9NQR4 276 aa15.23■□□□□ 0.03
VRK2-201ENST00000340157 NBEAL2Q6ZNJ1 2754 aa15.23■□□□□ 0.03
VRK2-201ENST00000340157 EGFEM1PQ0D2K5 195 aa15.23■□□□□ 0.03
VRK2-201ENST00000340157 LEPROTL1O95214 131 aa15.22■□□□□ 0.03
VRK2-201ENST00000340157 RRN3P1Q2M238 152 aa15.22■□□□□ 0.03
VRK2-201ENST00000340157 Q6ZTI0 123 aa15.22■□□□□ 0.03
VRK2-201ENST00000340157 DNAH3Q8TD57 4116 aa15.21■□□□□ 0.03
VRK2-201ENST00000340157 TRGV1A0A0A0MS02 117 aa15.21■□□□□ 0.03
VRK2-201ENST00000340157 RS1O15537 224 aa15.21■□□□□ 0.03
VRK2-201ENST00000340157 DAZ2Q13117 558 aaKnown RBP15.21■□□□□ 0.03
VRK2-201ENST00000340157 Q6ZSN1 163 aa15.21■□□□□ 0.03
VRK2-201ENST00000340157 NOP10Q9NPE3 64 aaKnown RBP15.21■□□□□ 0.03
VRK2-201ENST00000340157 KIR2DL5BA0A0G2JN68 375 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 KIR2DL5BA0A0G2JPC4 375 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 TCAPO15273 167 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 PPP1R17O96001 155 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 IGHV4-30-4P0DP06 118 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 KIR2DL5AQ8N109 375 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 KIR2DL5BQ8NHK3 375 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 X6R8D5 127 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 SCGB1D1O95968 90 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 NDUFAF3Q9BU61 184 aa15.2■□□□□ 0.02
VRK2-201ENST00000340157 HBDP02042 147 aa15.19■□□□□ 0.02
VRK2-201ENST00000340157 NEGR1Q7Z3B1 354 aa15.19■□□□□ 0.02
VRK2-201ENST00000340157 SPATA12Q7Z6I5 190 aa15.19■□□□□ 0.02
VRK2-201ENST00000340157 TRBV6-5A0A0K0K1A5 114 aa15.18■□□□□ 0.02
VRK2-201ENST00000340157 POLR2KP53803 58 aaKnown RBP15.18■□□□□ 0.02
VRK2-201ENST00000340157 TMEM70Q9BUB7 260 aa15.18■□□□□ 0.02
VRK2-201ENST00000340157 EDA2RQ9HAV5 297 aa15.18■□□□□ 0.02
VRK2-201ENST00000340157 LGALS9BQ3B8N2 356 aa15.18■□□□□ 0.02
VRK2-201ENST00000340157 OVOL2Q9BRP0 275 aa15.18■□□□□ 0.02
VRK2-201ENST00000340157 ST20Q9HBF5 79 aa15.18■□□□□ 0.02
VRK2-201ENST00000340157 P0DMU3 169 aa15.17■□□□□ 0.02
VRK2-201ENST00000340157 FAM231AP0DMU4 169 aa15.17■□□□□ 0.02
VRK2-201ENST00000340157 FAM231CP0DMU5 169 aa15.17■□□□□ 0.02
VRK2-201ENST00000340157 APOC4P55056 127 aa15.17■□□□□ 0.02
VRK2-201ENST00000340157 RPL32P62910 135 aaKnown RBP15.17■□□□□ 0.02
VRK2-201ENST00000340157 Q9UF83 564 aa15.17■□□□□ 0.02
VRK2-201ENST00000340157 G3V4G9 280 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms