RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 A0A087WW49 117 aa11.5□□□□□ -0.57
BRCC3-201ENST00000330045 DUSP14O95147 198 aaKnown RBP11.5□□□□□ -0.57
BRCC3-201ENST00000330045 MSMBP08118 114 aa11.5□□□□□ -0.57
BRCC3-201ENST00000330045 CFHR3Q02985 330 aa11.5□□□□□ -0.57
BRCC3-201ENST00000330045 LGALS1P09382 135 aaKnown RBP11.5□□□□□ -0.57
BRCC3-201ENST00000330045 RPL24P83731 157 aaKnown RBP11.5□□□□□ -0.57
BRCC3-201ENST00000330045 DCANP1Q8TF63 244 aa11.5□□□□□ -0.57
BRCC3-201ENST00000330045 WFDC12Q8WWY7 111 aa11.5□□□□□ -0.57
BRCC3-201ENST00000330045 JPT2Q9H910 190 aa11.5□□□□□ -0.57
BRCC3-201ENST00000330045 CYSLTR1Q9Y271 337 aa11.5□□□□□ -0.57
BRCC3-201ENST00000330045 RPL32P62910 135 aaKnown RBP11.49□□□□□ -0.57
BRCC3-201ENST00000330045 AVPP01185 164 aa11.49□□□□□ -0.57
BRCC3-201ENST00000330045 SCGB2A2Q13296 93 aa11.49□□□□□ -0.57
BRCC3-201ENST00000330045 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 A0A1B0GWB2 263 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 CRYGDP07320 174 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 CD7P09564 240 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 POLR2KP53803 58 aaKnown RBP11.48□□□□□ -0.57
BRCC3-201ENST00000330045 SAMD13Q5VXD3 122 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 SUMO4Q6EEV6 95 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 TP53TG1Q9Y2A0 90 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 TEX48A0A1B0GUV7 120 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 ZNF815PA8K554 130 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 F8W1H4 67 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 ZFP2Q6ZN57 461 aa11.48□□□□□ -0.57
BRCC3-201ENST00000330045 A0A087WWL8 130 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 LINC01549A6NIU2 74 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 RRN3P1Q2M238 152 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 TEX15Q9BXT5 2789 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 MXRA5Q9NR99 2828 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 F5H697 171 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 VCYO14598 125 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 TSHBP01222 138 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 TMEM95Q3KNT9 176 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 DEFB104AQ8WTQ1 72 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 KIR2DL4Q99706 377 aa11.47□□□□□ -0.57
BRCC3-201ENST00000330045 IGIPA6NJ69 53 aa11.46□□□□□ -0.57
BRCC3-201ENST00000330045 H3BMG7 143 aa11.46□□□□□ -0.57
BRCC3-201ENST00000330045 HOXA3O43365 443 aaPredicted RBP11.46□□□□□ -0.58
BRCC3-201ENST00000330045 CD300EQ496F6 205 aaPredicted RBP11.46□□□□□ -0.58
BRCC3-201ENST00000330045 SCGB1D4Q6XE38 83 aa11.46□□□□□ -0.58
BRCC3-201ENST00000330045 CCDC168Q8NDH2 2452 aa11.45□□□□□ -0.58
BRCC3-201ENST00000330045 IGLV4-69A0A075B6H9 119 aa11.45□□□□□ -0.58
BRCC3-201ENST00000330045 C11orf86A6NJI1 115 aa11.45□□□□□ -0.58
BRCC3-201ENST00000330045 PSMB8P28062 276 aa11.45□□□□□ -0.58
BRCC3-201ENST00000330045 WFDC2Q14508 124 aa11.45□□□□□ -0.58
BRCC3-201ENST00000330045 PAPPA-AS1Q5QFB9 102 aa11.45□□□□□ -0.58
BRCC3-201ENST00000330045 RPL39P62891 51 aaKnown RBP11.45□□□□□ -0.58
BRCC3-201ENST00000330045 PMVKQ15126 192 aa11.45□□□□□ -0.58
BRCC3-201ENST00000330045 SDHAF1A6NFY7 115 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 ZNF688P0C7X2 276 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 AMTNQ6UX39 209 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 KLHL30-AS1Q8NEE0 82 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 PLEKHB2Q96CS7 222 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 TMEM141Q96I45 108 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 ZNF580Q9UK33 172 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 TLN2Q9Y4G6 2542 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 A0A096LNT2 108 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 B4DSR2 109 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 EMP1P54849 157 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 HERVK_113P61574 105 aa11.44□□□□□ -0.58
BRCC3-201ENST00000330045 TMEM238LA0A1B0GVL6 79 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 A6NJY4 79 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 LGALS9O00182 355 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 SRSF9Q13242 221 aaKnown RBP eCLIP11.43□□□□□ -0.58
BRCC3-201ENST00000330045 FAM74A4Q5TZK3 123 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 MORN3Q6PF18 240 aaPredicted RBP11.43□□□□□ -0.58
BRCC3-201ENST00000330045 ODF3Q96PU9 254 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 TIMM17AQ99595 171 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 ITPR2Q14571 2701 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 IGHV3-16A0A0C4DH30 117 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 TRBV27A0A0K0K1C4 114 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 IGKV3-20P01619 116 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 C9orf85Q96MD7 179 aa11.43□□□□□ -0.58
BRCC3-201ENST00000330045 GCN1Q92616 2671 aaKnown RBP11.43□□□□□ -0.58
BRCC3-201ENST00000330045 TRAV12-2A0A075B6T6 113 aa11.42□□□□□ -0.58
BRCC3-201ENST00000330045 A0A0J9YX75 114 aa11.42□□□□□ -0.58
BRCC3-201ENST00000330045 TRBV6-5A0A0K0K1A5 114 aa11.42□□□□□ -0.58
BRCC3-201ENST00000330045 SNRPD3P62318 126 aaKnown RBP11.42□□□□□ -0.58
BRCC3-201ENST00000330045 C10orf99Q6UWK7 81 aa11.42□□□□□ -0.58
BRCC3-201ENST00000330045 SPANXB1Q9NS25 103 aaPredicted RBP11.42□□□□□ -0.58
BRCC3-201ENST00000330045 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
BRCC3-201ENST00000330045 CREBBPQ92793 2442 aa11.42□□□□□ -0.58
BRCC3-201ENST00000330045 IGHV4-59P01825 116 aa11.42□□□□□ -0.58
BRCC3-201ENST00000330045 GAGE13Q4V321 117 aa11.42□□□□□ -0.58
BRCC3-201ENST00000330045 PGPEP1Q9NXJ5 209 aa11.42□□□□□ -0.58
BRCC3-201ENST00000330045 PRRC2AP48634 2157 aaKnown RBP11.41□□□□□ -0.58
BRCC3-201ENST00000330045 SYT8Q8NBV8 401 aa11.41□□□□□ -0.58
BRCC3-201ENST00000330045 CUBNO60494 3623 aa11.41□□□□□ -0.58
BRCC3-201ENST00000330045 MRPL16Q9NX20 251 aaKnown RBP11.41□□□□□ -0.58
BRCC3-201ENST00000330045 ITPR3Q14573 2671 aa11.4□□□□□ -0.58
BRCC3-201ENST00000330045 ZNF56Q15929 161 aa11.4□□□□□ -0.58
BRCC3-201ENST00000330045 DEFB112Q30KQ8 113 aa11.4□□□□□ -0.58
BRCC3-201ENST00000330045 Q8N1Y9 231 aa11.4□□□□□ -0.58
BRCC3-201ENST00000330045 ZNF256Q9Y2P7 627 aaPredicted RBP11.4□□□□□ -0.58
BRCC3-201ENST00000330045 K7EQG2 157 aa11.4□□□□□ -0.59
BRCC3-201ENST00000330045 GATA3P23771 443 aa11.4□□□□□ -0.59
BRCC3-201ENST00000330045 UBE2D1P51668 147 aa11.4□□□□□ -0.59
BRCC3-201ENST00000330045 ETDBQ3ZM63 59 aa11.4□□□□□ -0.59
BRCC3-201ENST00000330045 TMEM170BQ5T4T1 132 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms