RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 Q6ZSN1 163 aa12.88□□□□□ -0.35
CIRBP-201ENST00000320936 ZNF56Q15929 161 aa12.88□□□□□ -0.35
CIRBP-201ENST00000320936 UFSP1Q6NVU6 142 aa12.88□□□□□ -0.35
CIRBP-201ENST00000320936 Q6ZR54 194 aa12.88□□□□□ -0.35
CIRBP-201ENST00000320936 C14orf178Q8N769 122 aaPredicted RBP12.88□□□□□ -0.35
CIRBP-201ENST00000320936 SSBP4Q9BWG4 385 aaPredicted RBP12.88□□□□□ -0.35
CIRBP-201ENST00000320936 NDUFS6O75380 124 aaKnown RBP12.87□□□□□ -0.35
CIRBP-201ENST00000320936 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
CIRBP-201ENST00000320936 RAB14P61106 215 aa12.87□□□□□ -0.35
CIRBP-201ENST00000320936 PEA15Q15121 130 aa12.87□□□□□ -0.35
CIRBP-201ENST00000320936 TTC32Q5I0X7 151 aa12.87□□□□□ -0.35
CIRBP-201ENST00000320936 SOHLH1Q5JUK2 328 aa12.87□□□□□ -0.35
CIRBP-201ENST00000320936 AP1S3Q96PC3 154 aa12.87□□□□□ -0.35
CIRBP-201ENST00000320936 GAGE12JA6NER3 117 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 SIVA1O15304 175 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 CRYGDP07320 174 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 IGLC6P0CF74 106 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 ERVFC1-1P60608 527 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 GAGE1Q13065 139 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 GAGE4Q13068 117 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 GAGE5Q13069 117 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 GAGE13Q4V321 117 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 C1orf134Q5TEV5 83 aa12.86□□□□□ -0.35
CIRBP-201ENST00000320936 A0A1W2PPQ1 181 aa12.85□□□□□ -0.35
CIRBP-201ENST00000320936 F5H697 171 aa12.85□□□□□ -0.35
CIRBP-201ENST00000320936 GATCO43716 136 aaKnown RBP12.85□□□□□ -0.35
CIRBP-201ENST00000320936 CACNG7P62955 275 aa12.85□□□□□ -0.35
CIRBP-201ENST00000320936 LY96Q9Y6Y9 160 aa12.85□□□□□ -0.35
CIRBP-201ENST00000320936 DNAH10Q8IVF4 4471 aa12.84□□□□□ -0.35
CIRBP-201ENST00000320936 F2Z2F3 143 aa12.84□□□□□ -0.35
CIRBP-201ENST00000320936 LYZL1Q6UWQ5 148 aa12.84□□□□□ -0.35
CIRBP-201ENST00000320936 ATP6V0E2Q8NHE4 81 aa12.84□□□□□ -0.35
CIRBP-201ENST00000320936 MGPP08493 103 aa12.83□□□□□ -0.36
CIRBP-201ENST00000320936 SRSF3P84103 164 aaKnown RBP12.83□□□□□ -0.36
CIRBP-201ENST00000320936 LINC01551Q86U37 167 aa12.83□□□□□ -0.36
CIRBP-201ENST00000320936 FRAS1Q86XX4 4008 aa12.83□□□□□ -0.36
CIRBP-201ENST00000320936 RAB4BP61018 213 aa12.82□□□□□ -0.36
CIRBP-201ENST00000320936 FAM74A3Q4VXF1 159 aa12.82□□□□□ -0.36
CIRBP-201ENST00000320936 OR10J3Q5JRS4 329 aa12.82□□□□□ -0.36
CIRBP-201ENST00000320936 WFDC10BQ8IUB3 73 aa12.82□□□□□ -0.36
CIRBP-201ENST00000320936 C9JQL5 133 aa12.81□□□□□ -0.36
CIRBP-201ENST00000320936 CTRLP40313 264 aa12.81□□□□□ -0.36
CIRBP-201ENST00000320936 TMEM241Q24JQ0 296 aa12.81□□□□□ -0.36
CIRBP-201ENST00000320936 LINC00336Q6ZUF6 198 aa12.81□□□□□ -0.36
CIRBP-201ENST00000320936 FAM231DQ6ZW35 169 aa12.81□□□□□ -0.36
CIRBP-201ENST00000320936 C6orf223Q8N319 242 aa12.81□□□□□ -0.36
CIRBP-201ENST00000320936 SMDT1Q9H4I9 107 aa12.81□□□□□ -0.36
CIRBP-201ENST00000320936 MSRB1Q9NZV6 116 aa12.81□□□□□ -0.36
CIRBP-201ENST00000320936 Q9UF83 564 aa12.81□□□□□ -0.36
CIRBP-201ENST00000320936 DNAH2Q9P225 4427 aa12.8□□□□□ -0.36
CIRBP-201ENST00000320936 TRAV8-6A0A0B4J262 113 aa12.8□□□□□ -0.36
CIRBP-201ENST00000320936 A8MWL6 223 aa12.8□□□□□ -0.36
CIRBP-201ENST00000320936 RTL8CO15255 209 aa12.8□□□□□ -0.36
CIRBP-201ENST00000320936 TRGC1P0CF51 173 aa12.8□□□□□ -0.36
CIRBP-201ENST00000320936 TIRAPP58753 221 aa12.8□□□□□ -0.36
CIRBP-201ENST00000320936 ADIRFQ15847 76 aa12.8□□□□□ -0.36
CIRBP-201ENST00000320936 KRTAP1-5Q9BYS1 174 aa12.8□□□□□ -0.36
CIRBP-201ENST00000320936 GTSF1LQ9H1H1 148 aa12.8□□□□□ -0.36
CIRBP-201ENST00000320936 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
CIRBP-201ENST00000320936 RPL36AP83881 106 aaKnown RBP12.79□□□□□ -0.36
CIRBP-201ENST00000320936 TWIST1Q15672 202 aa12.79□□□□□ -0.36
CIRBP-201ENST00000320936 C15orf54Q8N8G6 183 aa12.79□□□□□ -0.36
CIRBP-201ENST00000320936 RPL36ALQ969Q0 106 aaKnown RBP12.79□□□□□ -0.36
CIRBP-201ENST00000320936 NAT8Q9UHE5 227 aa12.79□□□□□ -0.36
CIRBP-201ENST00000320936 TRBV10-1A0A0K0K1A3 114 aa12.78□□□□□ -0.36
CIRBP-201ENST00000320936 LINC00694P0DN24 101 aa12.78□□□□□ -0.36
CIRBP-201ENST00000320936 NTF3P20783 257 aa12.78□□□□□ -0.36
CIRBP-201ENST00000320936 EVI2AP22794 236 aa12.78□□□□□ -0.36
CIRBP-201ENST00000320936 TRAV9-2A0A087WT02 112 aa12.77□□□□□ -0.37
CIRBP-201ENST00000320936 CT83Q5H943 113 aa12.77□□□□□ -0.37
CIRBP-201ENST00000320936 LELP1Q5T871 98 aa12.77□□□□□ -0.37
CIRBP-201ENST00000320936 GTSF1Q8WW33 167 aa12.77□□□□□ -0.37
CIRBP-201ENST00000320936 BORCS7Q96B45 105 aa12.77□□□□□ -0.37
CIRBP-201ENST00000320936 PGLYRP4Q96LB8 373 aa12.77□□□□□ -0.37
CIRBP-201ENST00000320936 RPL23P62829 140 aaKnown RBP12.76□□□□□ -0.37
CIRBP-201ENST00000320936 ISOC2Q96AB3 205 aa12.76□□□□□ -0.37
CIRBP-201ENST00000320936 OSTCQ9NRP0 149 aa12.76□□□□□ -0.37
CIRBP-201ENST00000320936 KIF25-AS1Q9Y6Z4 181 aa12.76□□□□□ -0.37
CIRBP-201ENST00000320936 TRBV7-3A0A075B6L6 115 aa12.75□□□□□ -0.37
CIRBP-201ENST00000320936 IGHV3-38A0A0C4DH36 116 aa12.75□□□□□ -0.37
CIRBP-201ENST00000320936 WDR73Q6P4I2 378 aa12.75□□□□□ -0.37
CIRBP-201ENST00000320936 SMIM15Q7Z3B0 74 aa12.75□□□□□ -0.37
CIRBP-201ENST00000320936 DPH3P1Q9H4G8 78 aa12.75□□□□□ -0.37
CIRBP-201ENST00000320936 A0A087WWC5 75 aa12.74□□□□□ -0.37
CIRBP-201ENST00000320936 H7C1H1 209 aa12.74□□□□□ -0.37
CIRBP-201ENST00000320936 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
CIRBP-201ENST00000320936 LINC00315P59091 139 aa12.74□□□□□ -0.37
CIRBP-201ENST00000320936 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.74□□□□□ -0.37
CIRBP-201ENST00000320936 NEXN-AS1Q8NBZ9 246 aa12.74□□□□□ -0.37
CIRBP-201ENST00000320936 TSKUQ8WUA8 353 aa12.74□□□□□ -0.37
CIRBP-201ENST00000320936 EPPK1P58107 5090 aaKnown RBP12.73□□□□□ -0.37
CIRBP-201ENST00000320936 UBE2D3P61077 147 aa12.73□□□□□ -0.37
CIRBP-201ENST00000320936 UBE2D2P62837 147 aa12.73□□□□□ -0.37
CIRBP-201ENST00000320936 CLLU1Q5K131 121 aa12.73□□□□□ -0.37
CIRBP-201ENST00000320936 SUMO4Q6EEV6 95 aa12.73□□□□□ -0.37
CIRBP-201ENST00000320936 CNFNQ9BYD5 112 aa12.73□□□□□ -0.37
CIRBP-201ENST00000320936 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
CIRBP-201ENST00000320936 IGHV3-30P01768 117 aa12.72□□□□□ -0.37
CIRBP-201ENST00000320936 IGHV3-33P01772 117 aa12.72□□□□□ -0.37
CIRBP-201ENST00000320936 IGHV3-30-3P0DP02 117 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms