RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 CRPP02741 224 aa12.79□□□□□ -0.36
PACS1-201ENST00000320580 UBE2D1P51668 147 aa12.79□□□□□ -0.36
PACS1-201ENST00000320580 RASL10AQ92737 203 aa12.79□□□□□ -0.36
PACS1-201ENST00000320580 UBE2D3P61077 147 aa12.78□□□□□ -0.36
PACS1-201ENST00000320580 UBE2D2P62837 147 aa12.78□□□□□ -0.36
PACS1-201ENST00000320580 Q6Q795 121 aa12.78□□□□□ -0.36
PACS1-201ENST00000320580 LINC01619G3V211 115 aa12.78□□□□□ -0.36
PACS1-201ENST00000320580 THBDP07204 575 aa12.78□□□□□ -0.36
PACS1-201ENST00000320580 PRIMA1Q86XR5 153 aa12.78□□□□□ -0.36
PACS1-201ENST00000320580 A0A0B4J2C4 111 aa12.78□□□□□ -0.36
PACS1-201ENST00000320580 IGHV3OR16-10A0A075B7F0 116 aa12.77□□□□□ -0.36
PACS1-201ENST00000320580 IGHG3P01860 377 aa12.77□□□□□ -0.37
PACS1-201ENST00000320580 LINC00643Q86TS7 51 aa12.77□□□□□ -0.37
PACS1-201ENST00000320580 DNAJC30Q96LL9 226 aa12.77□□□□□ -0.37
PACS1-201ENST00000320580 CTSZQ9UBR2 303 aa12.77□□□□□ -0.37
PACS1-201ENST00000320580 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.37
PACS1-201ENST00000320580 PIMREGQ9BSJ6 248 aa12.77□□□□□ -0.37
PACS1-201ENST00000320580 ACACBO00763 2458 aa12.77□□□□□ -0.37
PACS1-201ENST00000320580 hADV29S1A0JD25 119 aa12.76□□□□□ -0.37
PACS1-201ENST00000320580 TRIAP1O43715 76 aa12.76□□□□□ -0.37
PACS1-201ENST00000320580 IGHV3-30P01768 117 aa12.76□□□□□ -0.37
PACS1-201ENST00000320580 IGHV3-30-5P0DP03 117 aa12.76□□□□□ -0.37
PACS1-201ENST00000320580 PIP4P1Q86T03 277 aa12.76□□□□□ -0.37
PACS1-201ENST00000320580 DAND5Q8N907 189 aa12.76□□□□□ -0.37
PACS1-201ENST00000320580 NACAE9PAV3 2078 aa12.76□□□□□ -0.37
PACS1-201ENST00000320580 LY6EQ16553 131 aa12.76□□□□□ -0.37
PACS1-201ENST00000320580 OPRPNQ99935 248 aaPredicted RBP12.76□□□□□ -0.37
PACS1-201ENST00000320580 MOB4Q9Y3A3 225 aa12.76□□□□□ -0.37
PACS1-201ENST00000320580 WT1P19544 449 aaPredicted RBP12.76□□□□□ -0.37
PACS1-201ENST00000320580 SMIM9A6NGZ8 99 aa12.75□□□□□ -0.37
PACS1-201ENST00000320580 UBE2L6O14933 153 aa12.75□□□□□ -0.37
PACS1-201ENST00000320580 TNRC6BQ9UPQ9 1833 aaKnown RBP12.75□□□□□ -0.37
PACS1-201ENST00000320580 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
PACS1-201ENST00000320580 LOC107984640A0A0U1RRK4 108 aa12.74□□□□□ -0.37
PACS1-201ENST00000320580 LINC01548A6NM66 108 aa12.74□□□□□ -0.37
PACS1-201ENST00000320580 F6UB75 175 aa12.74□□□□□ -0.37
PACS1-201ENST00000320580 LINC01560Q8TB33 94 aa12.74□□□□□ -0.37
PACS1-201ENST00000320580 LRP4O75096 1905 aa12.74□□□□□ -0.37
PACS1-201ENST00000320580 NRACQ8N912 160 aa12.74□□□□□ -0.37
PACS1-201ENST00000320580 CTSGP08311 255 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 VMO1Q7Z5L0 202 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 TINCRA0A1B0GVN0 87 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 I3L3M4 83 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 FSTL3O95633 263 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 P0DMU3 169 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 FAM231AP0DMU4 169 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 FAM231CP0DMU5 169 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 NBL1P41271 181 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 WDFY4Q6ZS81 3184 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 RBMY1BA6NDE4 496 aaKnown RBP12.73□□□□□ -0.37
PACS1-201ENST00000320580 RBMY1EA6NEQ0 496 aaKnown RBP12.73□□□□□ -0.37
PACS1-201ENST00000320580 RBMY1DP0C7P1 496 aaKnown RBP12.73□□□□□ -0.37
PACS1-201ENST00000320580 RBMY1A1P0DJD3 496 aaKnown RBP12.73□□□□□ -0.37
PACS1-201ENST00000320580 RBMY1CP0DJD4 496 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 LINC00158P58513 81 aa12.73□□□□□ -0.37
PACS1-201ENST00000320580 G3V318 75 aa12.72□□□□□ -0.37
PACS1-201ENST00000320580 RHOHQ15669 191 aa12.72□□□□□ -0.37
PACS1-201ENST00000320580 PRR30Q53SZ7 412 aaPredicted RBP12.72□□□□□ -0.37
PACS1-201ENST00000320580 C8orf31Q8N9H6 132 aa12.72□□□□□ -0.37
PACS1-201ENST00000320580 FAM208BQ5VWN6 2430 aa12.72□□□□□ -0.37
PACS1-201ENST00000320580 SOCS3O14543 225 aa12.72□□□□□ -0.37
PACS1-201ENST00000320580 SUMO4Q6EEV6 95 aa12.72□□□□□ -0.37
PACS1-201ENST00000320580 MBD3L4A6NDZ8 208 aaPredicted RBP12.72□□□□□ -0.37
PACS1-201ENST00000320580 MBD3L3A6NE82 208 aaPredicted RBP12.72□□□□□ -0.37
PACS1-201ENST00000320580 MBD3L5A6NJ08 208 aaPredicted RBP12.72□□□□□ -0.37
PACS1-201ENST00000320580 CRYGBP07316 175 aa12.72□□□□□ -0.37
PACS1-201ENST00000320580 MBD3L2Q8NHZ7 208 aaPredicted RBP12.72□□□□□ -0.37
PACS1-201ENST00000320580 HOXD3P31249 432 aaPredicted RBP12.71□□□□□ -0.37
PACS1-201ENST00000320580 SRSF2Q01130 221 aaKnown RBP12.71□□□□□ -0.37
PACS1-201ENST00000320580 TIMM17AQ99595 171 aa12.71□□□□□ -0.37
PACS1-201ENST00000320580 KLK5Q9Y337 293 aaPredicted RBP12.71□□□□□ -0.37
PACS1-201ENST00000320580 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
PACS1-201ENST00000320580 IGLV11-55A0A075B6I3 123 aa12.7□□□□□ -0.38
PACS1-201ENST00000320580 BUB3O43684 328 aa12.7□□□□□ -0.38
PACS1-201ENST00000320580 LY6HO94772 140 aa12.7□□□□□ -0.38
PACS1-201ENST00000320580 CSDC2Q9Y534 153 aaKnown RBP12.7□□□□□ -0.38
PACS1-201ENST00000320580 KNCNA6PVL3 124 aa12.7□□□□□ -0.38
PACS1-201ENST00000320580 ATP6V0E1O15342 81 aa12.69□□□□□ -0.38
PACS1-201ENST00000320580 PAX4O43316 350 aa12.69□□□□□ -0.38
PACS1-201ENST00000320580 ATP5G1P05496 136 aa12.69□□□□□ -0.38
PACS1-201ENST00000320580 DEFB1P60022 68 aa12.69□□□□□ -0.38
PACS1-201ENST00000320580 S100A7L2Q5SY68 101 aa12.69□□□□□ -0.38
PACS1-201ENST00000320580 TRBV7-1A0A0A6YYK4 115 aa12.69□□□□□ -0.38
PACS1-201ENST00000320580 FAM19A5Q7Z5A7 132 aaPredicted RBP12.69□□□□□ -0.38
PACS1-201ENST00000320580 A0A0J9YXY3 114 aa12.69□□□□□ -0.38
PACS1-201ENST00000320580 ZNF672Q499Z4 452 aaPredicted RBP12.69□□□□□ -0.38
PACS1-201ENST00000320580 TMEM219Q86XT9 240 aa12.69□□□□□ -0.38
PACS1-201ENST00000320580 SPEGQ15772 3267 aa12.69□□□□□ -0.38
PACS1-201ENST00000320580 JPT2Q9H910 190 aa12.68□□□□□ -0.38
PACS1-201ENST00000320580 FHL3Q13643 280 aa12.68□□□□□ -0.38
PACS1-201ENST00000320580 LINC00574Q9H8X3 128 aa12.68□□□□□ -0.38
PACS1-201ENST00000320580 TRBV30A0A0K0K1B3 111 aa12.68□□□□□ -0.38
PACS1-201ENST00000320580 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.68□□□□□ -0.38
PACS1-201ENST00000320580 RBMY1FQ15415 496 aaKnown RBP12.68□□□□□ -0.38
PACS1-201ENST00000320580 IGHV3-30-3P0DP02 117 aa12.67□□□□□ -0.38
PACS1-201ENST00000320580 ZNF22P17026 224 aaPredicted RBP12.67□□□□□ -0.38
PACS1-201ENST00000320580 KLK9Q9UKQ9 250 aa12.67□□□□□ -0.38
PACS1-201ENST00000320580 TMEM243Q9BU79 118 aa12.67□□□□□ -0.38
PACS1-201ENST00000320580 RHPN1-AS1Q9BWJ2 59 aa12.67□□□□□ -0.38
PACS1-201ENST00000320580 COL4A2P08572 1712 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms