RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ANKRD29Q8N6D5 301 aa10.83□□□□□ -0.68
PABPC1-201ENST00000318607 CITED2Q99967 270 aaPredicted RBP10.83□□□□□ -0.68
PABPC1-201ENST00000318607 PRM2P04554 102 aa10.82□□□□□ -0.68
PABPC1-201ENST00000318607 SAA4P35542 130 aa10.82□□□□□ -0.68
PABPC1-201ENST00000318607 KNCNA6PVL3 124 aa10.82□□□□□ -0.68
PABPC1-201ENST00000318607 TCF15Q12870 199 aa10.82□□□□□ -0.68
PABPC1-201ENST00000318607 ZNF625Q96I27 306 aaPredicted RBP10.82□□□□□ -0.68
PABPC1-201ENST00000318607 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
PABPC1-201ENST00000318607 FLNCQ14315 2725 aa10.82□□□□□ -0.68
PABPC1-201ENST00000318607 PRRC2AP48634 2157 aaKnown RBP10.82□□□□□ -0.68
PABPC1-201ENST00000318607 IGHV7-4-1A0A0J9YVY3 117 aa10.82□□□□□ -0.68
PABPC1-201ENST00000318607 RPL32P62910 135 aaKnown RBP10.82□□□□□ -0.68
PABPC1-201ENST00000318607 Q6ZUT4 128 aa10.82□□□□□ -0.68
PABPC1-201ENST00000318607 HIST2H2BDQ6DRA6 164 aa10.81□□□□□ -0.68
PABPC1-201ENST00000318607 TEX29Q8N6K0 151 aa10.81□□□□□ -0.68
PABPC1-201ENST00000318607 DAND5Q8N907 189 aa10.81□□□□□ -0.68
PABPC1-201ENST00000318607 NTN5Q8WTR8 489 aaPredicted RBP10.81□□□□□ -0.68
PABPC1-201ENST00000318607 KLK9Q9UKQ9 250 aa10.81□□□□□ -0.68
PABPC1-201ENST00000318607 TNFRSF18Q9Y5U5 241 aa10.81□□□□□ -0.68
PABPC1-201ENST00000318607 VPS13CQ709C8 3753 aa10.81□□□□□ -0.68
PABPC1-201ENST00000318607 TRBV7-3A0A075B6L6 115 aa10.81□□□□□ -0.68
PABPC1-201ENST00000318607 TNFRSF13BO14836 293 aaPredicted RBP10.81□□□□□ -0.68
PABPC1-201ENST00000318607 CEMP1Q6PRD7 247 aaPredicted RBP10.81□□□□□ -0.68
PABPC1-201ENST00000318607 Q6ZSV7 163 aa10.81□□□□□ -0.68
PABPC1-201ENST00000318607 HERVK_113P61574 105 aa10.81□□□□□ -0.68
PABPC1-201ENST00000318607 A8MZ25 164 aa10.8□□□□□ -0.68
PABPC1-201ENST00000318607 ZNF688P0C7X2 276 aa10.8□□□□□ -0.68
PABPC1-201ENST00000318607 LINC01559Q495D7 138 aa10.8□□□□□ -0.68
PABPC1-201ENST00000318607 ORMDL2Q53FV1 153 aa10.8□□□□□ -0.68
PABPC1-201ENST00000318607 CCDC140Q96MF4 163 aa10.8□□□□□ -0.68
PABPC1-201ENST00000318607 IGLV2-18A0A075B6J9 118 aa10.79□□□□□ -0.68
PABPC1-201ENST00000318607 IGFL3Q6UXB1 125 aa10.79□□□□□ -0.68
PABPC1-201ENST00000318607 ZMAT4Q9H898 229 aa10.79□□□□□ -0.68
PABPC1-201ENST00000318607 RBAKDNA6NC62 111 aa10.79□□□□□ -0.68
PABPC1-201ENST00000318607 TSPEAR-AS2P59090 65 aa10.79□□□□□ -0.68
PABPC1-201ENST00000318607 FAM159AQ6UWV7 190 aa10.79□□□□□ -0.68
PABPC1-201ENST00000318607 OR11H6Q8NGC7 330 aa10.79□□□□□ -0.68
PABPC1-201ENST00000318607 CDIP1Q9H305 208 aa10.79□□□□□ -0.68
PABPC1-201ENST00000318607 DPH3P1Q9H4G8 78 aa10.79□□□□□ -0.68
PABPC1-201ENST00000318607 TTC32Q5I0X7 151 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 Q8N9W7 124 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 BSNQ9UPA5 3926 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 CLPSL1A2RUU4 121 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 LY6LH3BQJ8 138 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 EEF1AKMT3Q96AZ1 226 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 CARD19Q96LW7 228 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 FBN2P35556 2912 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 SDHAF1A6NFY7 115 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 SNCGO76070 127 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 C8orf31Q8N9H6 132 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 PRO0461Q9UI25 63 aa10.78□□□□□ -0.68
PABPC1-201ENST00000318607 TRBV6-1A0A0K0K1D8 114 aa10.77□□□□□ -0.68
PABPC1-201ENST00000318607 RS1O15537 224 aa10.77□□□□□ -0.68
PABPC1-201ENST00000318607 CFAP126Q5VTH2 177 aa10.77□□□□□ -0.68
PABPC1-201ENST00000318607 ZFAND6Q6FIF0 208 aa10.77□□□□□ -0.68
PABPC1-201ENST00000318607 Q8NA96 180 aa10.77□□□□□ -0.68
PABPC1-201ENST00000318607 SLC50A1Q9BRV3 221 aa10.77□□□□□ -0.68
PABPC1-201ENST00000318607 TEX49A0A1B0GTD5 131 aa10.77□□□□□ -0.69
PABPC1-201ENST00000318607 SLC25A20O43772 301 aa10.77□□□□□ -0.69
PABPC1-201ENST00000318607 NDUFA11Q86Y39 141 aa10.77□□□□□ -0.69
PABPC1-201ENST00000318607 SPATA25Q9BR10 227 aa10.77□□□□□ -0.69
PABPC1-201ENST00000318607 PPDPFQ9H3Y8 114 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 ACANP16112 2415 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 TRAV21A0A0B4J279 112 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 A0A0J9YXV3 536 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 CFC1BP0CG36 223 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 CFC1P0CG37 223 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 GAGE2BQ13066 116 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 GAGE2EQ4V326 116 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 NEXN-AS1Q8NBZ9 246 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 PPDPFLQ8WWR9 84 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 GAGE2DQ9UEU5 116 aa10.76□□□□□ -0.69
PABPC1-201ENST00000318607 MUC4Q99102 2169 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 TRAV8-3A0A0A6YYJ7 113 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 FAM110AQ9BQ89 295 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 NBEAL2Q6ZNJ1 2754 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 P0DMU3 169 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 FAM231AP0DMU4 169 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 FAM231CP0DMU5 169 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 ZFAND3Q9H8U3 227 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 ERG28Q9UKR5 140 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 CRLF1O75462 422 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 DUX3Q96PT4 197 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 NF1P21359 2839 aa10.75□□□□□ -0.69
PABPC1-201ENST00000318607 TRAV4A0A0B4J268 109 aa10.74□□□□□ -0.69
PABPC1-201ENST00000318607 J3QQQ9 107 aa10.74□□□□□ -0.69
PABPC1-201ENST00000318607 ELANEP08246 267 aa10.74□□□□□ -0.69
PABPC1-201ENST00000318607 BPESC1Q9GZL8 116 aa10.74□□□□□ -0.69
PABPC1-201ENST00000318607 PRO1854Q9UHT4 67 aa10.74□□□□□ -0.69
PABPC1-201ENST00000318607 SRSF2Q01130 221 aaKnown RBP10.74□□□□□ -0.69
PABPC1-201ENST00000318607 TEN1Q86WV5 123 aa10.74□□□□□ -0.69
PABPC1-201ENST00000318607 MUSTN1Q8IVN3 82 aa10.74□□□□□ -0.69
PABPC1-201ENST00000318607 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
PABPC1-201ENST00000318607 SPINK13Q1W4C9 94 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 ZNF876PQ49A33 203 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 PSMG4Q5JS54 123 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 NPBQ8NG41 125 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 RNF5Q99942 180 aa10.73□□□□□ -0.69
PABPC1-201ENST00000318607 NIPBLQ6KC79 2804 aaeCLIP10.73□□□□□ -0.691e-8■□□□□ 9.7
PABPC1-201ENST00000318607 A0A0J9YY99 117 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms