RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 MLST8Q9BVC4 326 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 DAZ2Q13117 558 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 DAZ4Q86SG3 579 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 DAZ3Q9NR90 486 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 ANKRD17O75179 2603 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 P0DMU3 169 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 TCTAP57738 103 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 ADAMTSL5Q6ZMM2 481 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 TMEM263Q8WUH6 116 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 TMEM238C9JI98 176 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 ZC2HC1AQ96GY0 325 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 K7EQG2 157 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 TSPAN13O95857 204 aa6.5□□□□□ -1.37
PDLIM5-201ENST00000317968 KIAA1644Q3SXP7 199 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 H3BMM0 161 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 UBE2WQ96B02 151 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 MAP6D1Q9H9H5 199 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 C19orf71A6NCJ1 209 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 SLC25A34Q6PIV7 304 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 C17orf77Q96MU5 243 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 CDH23Q9H251 3354 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 K7EN84 100 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 UNQ9165/PRO28630Q6UXU0 137 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 SVIPQ8NHG7 77 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 HHLA3Q9XRX5 114 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 DEFB131BA0A096LNP1 70 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 TMEM213A2RRL7 107 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 LINC00482Q8N8I6 264 aa6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 NHP2Q9NX24 153 aaKnown RBP6.49□□□□□ -1.37
PDLIM5-201ENST00000317968 K7EMI3 77 aa6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 LEPROTO15243 131 aa6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 A0A096LPF7 62 aa6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 COA6Q5JTJ3 125 aaKnown RBP6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 DEFB114Q30KQ6 69 aa6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 LBHQ53QV2 105 aaPredicted RBP6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 PRO0255Q9UI72 69 aa6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 FAM104BQ5XKR9 115 aa6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 COX8CQ7Z4L0 72 aa6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 U3KQK5 164 aa6.48□□□□□ -1.37
PDLIM5-201ENST00000317968 LOC107984156A0A0G2JMH3 177 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 A0A0J9YX75 114 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 MRPS12O15235 138 aaKnown RBP6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 LINC00614P0C842 121 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 ARL17AQ8IVW1 177 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 TMEM61Q8N0U2 210 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 IGKCP01834 107 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 HLA-DRB4P13762 266 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 TIRAPP58753 221 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 HERVK_113P63121 156 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 HLA-DRB4X5D2U9 266 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 D6R8Y8 96 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 AKAP13Q12802 2813 aa6.47□□□□□ -1.37
PDLIM5-201ENST00000317968 TRBV12-3P01733 135 aa6.46□□□□□ -1.37
PDLIM5-201ENST00000317968 SMIM13P0DJ93 91 aa6.46□□□□□ -1.37
PDLIM5-201ENST00000317968 NCR2O95944 276 aa6.46□□□□□ -1.37
PDLIM5-201ENST00000317968 CTRLP40313 264 aa6.46□□□□□ -1.37
PDLIM5-201ENST00000317968 C4orf48Q5BLP8 95 aa6.46□□□□□ -1.37
PDLIM5-201ENST00000317968 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.37
PDLIM5-201ENST00000317968 ABCA12Q86UK0 2595 aa6.46□□□□□ -1.38
PDLIM5-201ENST00000317968 TLN2Q9Y4G6 2542 aa6.46□□□□□ -1.38
PDLIM5-201ENST00000317968 SMR3AQ99954 134 aa6.46□□□□□ -1.38
PDLIM5-201ENST00000317968 PRSS29PA6NIE9 313 aa6.46□□□□□ -1.38
PDLIM5-201ENST00000317968 LY6G6CO95867 125 aa6.46□□□□□ -1.38
PDLIM5-201ENST00000317968 IGLV2-8P01709 118 aa6.46□□□□□ -1.38
PDLIM5-201ENST00000317968 GFI1BQ5VTD9 330 aa6.46□□□□□ -1.38
PDLIM5-201ENST00000317968 PRIMA1Q86XR5 153 aa6.46□□□□□ -1.38
PDLIM5-201ENST00000317968 TRAV4A0A0B4J268 109 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 SPATA45Q537H7 98 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 SZT2Q5T011 3432 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 IGHV3-30P01768 117 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 IGHV3-33P01772 117 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 IGHV3-30-3P0DP02 117 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 IGHV3-30-5P0DP03 117 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 FAM110AQ9BQ89 295 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 TMEM126AQ9H061 195 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 SONP18583 2426 aaKnown RBP6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 IFI27L1Q96BM0 104 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 C20orf78Q9BR46 151 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 SDHAF1A6NFY7 115 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 FABP2P12104 132 aa6.45□□□□□ -1.38
PDLIM5-201ENST00000317968 SERF1AO75920 110 aa6.44□□□□□ -1.38
PDLIM5-201ENST00000317968 SCGB1A1P11684 91 aa6.44□□□□□ -1.38
PDLIM5-201ENST00000317968 HIST3H2BBQ8N257 126 aa6.44□□□□□ -1.38
PDLIM5-201ENST00000317968 PCP4P48539 62 aa6.44□□□□□ -1.38
PDLIM5-201ENST00000317968 ZNF124Q15973 351 aa6.44□□□□□ -1.38
PDLIM5-201ENST00000317968 Q6ZQT7 251 aa6.44□□□□□ -1.38
PDLIM5-201ENST00000317968 UNC80Q8N2C7 3258 aa6.44□□□□□ -1.38
PDLIM5-201ENST00000317968 HLA-DMBP28068 263 aa6.44□□□□□ -1.38
PDLIM5-201ENST00000317968 CAMK2N2Q96S95 79 aa6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 UQCR10Q9UDW1 63 aa6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 Q8N8P6 123 aa6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 SSBP4Q9BWG4 385 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 F6UB75 175 aa6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 REV3LO60673 3130 aa6.43□□□□□ -1.38
PDLIM5-201ENST00000317968 PRSS47A8MTI9 375 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms