RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 TRBV30A0A0K0K1B3 111 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 FAM222AQ5U5X8 452 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 ZC2HC1AQ96GY0 325 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 TP53TG1Q9Y2A0 90 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 TRAV12-3A0A0B4J271 114 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 LINC00205P59089 165 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 LEAP2Q969E1 77 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 FAM167A-AS1Q96KT0 104 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 PAX8Q06710 450 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 ARRDC1-AS1Q9H2J1 176 aa3.58□□□□□ -1.84
CNOT1-201ENST00000317147 TRAV13-1A0A0B4J241 112 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 F6UB75 175 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 EXOC3-AS1Q8N2X6 119 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 SLC25A29Q8N8R3 303 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 ORMDL1Q9P0S3 153 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 NDUFA12Q9UI09 145 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 FXYD2P54710 66 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 B3GALT5-AS1P59052 145 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 SLC25A45Q8N413 288 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 DAZ1Q9NQZ3 744 aaKnown RBP3.57□□□□□ -1.84
CNOT1-201ENST00000317147 TENM1Q9UKZ4 2725 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 FOXE3Q13461 319 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 TRIP6Q15654 476 aaKnown RBP3.57□□□□□ -1.84
CNOT1-201ENST00000317147 FAM74A4Q5TZK3 123 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 C16orf54Q6UWD8 224 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 Q8N1Y9 231 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 MLST8Q9BVC4 326 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 METRNQ9UJH8 293 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 SERP2Q8N6R1 65 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 TMEM243Q9BU79 118 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 IGHG3P01860 377 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 CD7P09564 240 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 RPL36AP83881 106 aaKnown RBP3.57□□□□□ -1.84
CNOT1-201ENST00000317147 RPL36ALQ969Q0 106 aaKnown RBP3.57□□□□□ -1.84
CNOT1-201ENST00000317147 TRAV8-3A0A0A6YYJ7 113 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 NDUFB1O75438 58 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 ERCC8Q13216 396 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 ODF3Q96PU9 254 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 SAP30O75446 220 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 FAM201AQ5SY85 155 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 PCP2Q8IVA1 136 aa3.57□□□□□ -1.84
CNOT1-201ENST00000317147 FAM110DQ8TAY7 271 aaPredicted RBP3.57□□□□□ -1.84
CNOT1-201ENST00000317147 MCRIP2Q9BUT9 160 aaKnown RBP3.57□□□□□ -1.84
CNOT1-201ENST00000317147 EFNA2O43921 213 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 CCL4P13236 92 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 GATA2P23769 480 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-201ENST00000317147 C15orf32Q32M92 178 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 PRR31Q5SQ13 230 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 BUB1B-PAK6H3BSN5 160 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 LGALS9O00182 355 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 TGFAP01135 160 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 CELA3BP08861 270 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 IGHV1-2P23083 117 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 PIK3CD-AS1Q5SR53 167 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 ASPHD1Q5U4P2 390 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 LINC00526Q96FQ7 95 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 NAA38Q9BRA0 125 aaKnown RBP3.56□□□□□ -1.84
CNOT1-201ENST00000317147 K7ERJ3 54 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 INSP01308 110 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 ZNF134P52741 427 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 C2orf91Q6ZV80 131 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 NTN5Q8WTR8 489 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-201ENST00000317147 BCE1O60756 84 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 TCF15Q12870 199 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 IGKV1D-17A0A075B6S4 117 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 NUPR1O60356 82 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 RFPL3SP0C7P2 107 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 PRIMA1Q86XR5 153 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 CD177Q8N6Q3 437 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 MDFICQ9P1T7 246 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 COX7CP15954 63 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 RNASE4P34096 147 aaKnown RBP3.56□□□□□ -1.84
CNOT1-201ENST00000317147 RSPO1Q2MKA7 263 aaPredicted RBP3.56□□□□□ -1.84
CNOT1-201ENST00000317147 FGFBP3Q8TAT2 258 aa3.56□□□□□ -1.84
CNOT1-201ENST00000317147 IGHV3-21A0A0B4J1V1 117 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 TMEM256-PLSCR3K7ERE1 68 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 IGHV1-58A0A0C4DH39 117 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 WFDC2Q14508 124 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 IGLV3-9A0A075B6K5 115 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 TRAV3A0A0B4J244 114 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 NDUFA4O00483 81 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 TRGV3P03979 118 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 DAD1P61803 113 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 NSUN5P1Q3KNT7 163 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 SP5Q6BEB4 398 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-201ENST00000317147 VWCEQ96DN2 955 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 H7C423 109 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 GATA3P23771 443 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 COX8CQ7Z4L0 72 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 DKK2Q9UBU2 259 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 MBD3L4A6NDZ8 208 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-201ENST00000317147 MBD3L3A6NE82 208 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-201ENST00000317147 MBD3L5A6NJ08 208 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-201ENST00000317147 IGLV1-44P01699 117 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 WT1-ASQ06250 92 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 MUSTN1Q8IVN3 82 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 MBD3L2Q8NHZ7 208 aaPredicted RBP3.55□□□□□ -1.84
CNOT1-201ENST00000317147 GAFA1Q96PS6 74 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 LINC00527Q9UJ94 153 aa3.55□□□□□ -1.84
CNOT1-201ENST00000317147 TMEM178BH3BS89 294 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms