RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 WFDC3Q8IUB2 231 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 LINC00479Q96M42 142 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 LINC00527Q9UJ94 153 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 BAHCC1Q9P281 2608 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 PRKDCP78527 4128 aaKnown RBP4.64□□□□□ -1.67
SEC22A-201ENST00000309934 TRAV4A0A0B4J268 109 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 BUB3O43684 328 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 RNASE1P07998 156 aaKnown RBP4.64□□□□□ -1.67
SEC22A-201ENST00000309934 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 KLHL30-AS1Q8NEE0 82 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 TP73-AS1Q9UF72 201 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 TRRAPQ9Y4A5 3859 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 ATOX1O00244 68 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 RRN3P1Q2M238 152 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 TRPT1Q86TN4 253 aaKnown RBP4.64□□□□□ -1.67
SEC22A-201ENST00000309934 CYYR1Q96J86 154 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 TM2D2Q9BX73 214 aa4.64□□□□□ -1.67
SEC22A-201ENST00000309934 WDR87Q6ZQQ6 2873 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 LYSTQ99698 3801 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 MALRD1Q5VYJ5 2156 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 HIVEP2P31629 2446 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 A0A1W2PPR1 153 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 SMIM27A0A1W2PRY6 76 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 IGLV1-40P01703 118 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 PRSS2P07478 247 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 DAD1P61803 113 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 PATE2Q6UY27 113 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 DSCR8Q96T75 97 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 ICE1Q9Y2F5 2266 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 CADP27708 2225 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 C12orf74Q32Q52 190 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 PGLYRP4Q96LB8 373 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 DSCAMO60469 2012 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 FAM240AA0A1B0GVK7 77 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 A0A1B0GX51 115 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 CLPSL1A2RUU4 121 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 HIGD1CA8MV81 97 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 ZNF561-AS1K7EIQ3 104 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 DYNAPQ8N1N2 210 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 SCRT2Q9NQ03 307 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 PLA2G2EQ9NZK7 142 aa4.63□□□□□ -1.67
SEC22A-201ENST00000309934 KLK5Q9Y337 293 aaPredicted RBP4.63□□□□□ -1.67
SEC22A-201ENST00000309934 COL6A3P12111 3177 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 MTORP42345 2549 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 IGKCP01834 107 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 CKS2P33552 79 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 C9orf47Q6ZRZ4 202 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 ORMDL3Q8N138 153 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 PRR25Q96S07 402 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 S4R3C0 116 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 CEP295Q9C0D2 2601 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 IGKV1OR2-108A0A075B7D4 117 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 NPIPB6E9PJ23 425 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 K7EMI3 77 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 INSP01308 110 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 C16orf95Q9H693 158 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 M0R2P5 195 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 NDPQ00604 133 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 NDUFA11Q86Y39 141 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 IFI27L1Q96BM0 104 aa4.62□□□□□ -1.67
SEC22A-201ENST00000309934 E7EUB6 86 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 CRXO43186 299 aaPredicted RBP4.61□□□□□ -1.67
SEC22A-201ENST00000309934 SH2D1AO60880 128 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 FXYD2P54710 66 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 EXOC3-AS1Q8N2X6 119 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 IGF2BP2-AS1Q96M15 143 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 BBC3Q96PG8 261 aaPredicted RBP4.61□□□□□ -1.67
SEC22A-201ENST00000309934 IGHV1-24A0A0C4DH33 117 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 DNAL4O96015 105 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 FGF6P10767 208 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 ATXN8Q156A1 80 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 Q8N2B8 174 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 GTSF1Q8WW33 167 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 V9GYV3 84 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 DYNC2H1Q8NCM8 4307 aaKnown RBP4.61□□□□□ -1.67
SEC22A-201ENST00000309934 TRAV12-3A0A0B4J271 114 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 PSMB8P28062 276 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 ASPHD1Q5U4P2 390 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 LAMTOR3Q9UHA4 124 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 CCDC168Q8NDH2 2452 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 RAI1Q7Z5J4 1906 aaPredicted RBP4.61□□□□□ -1.67
SEC22A-201ENST00000309934 PKDREJQ9NTG1 2253 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 DNAJC9-AS1A6NH13 148 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 ATP5G1P05496 136 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 HOXD3P31249 432 aaPredicted RBP4.61□□□□□ -1.67
SEC22A-201ENST00000309934 HILS1P60008 231 aa4.61□□□□□ -1.67
SEC22A-201ENST00000309934 F5H697 171 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 C9orf66Q5T8R8 295 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 RNF182Q8N6D2 247 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 CCDC140Q96MF4 163 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 USP9XQ93008 2570 aaPredicted RBP4.6□□□□□ -1.67
SEC22A-201ENST00000309934 AKAP6Q13023 2319 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 IGHV3-35A0A0C4DH35 117 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 NCR2O95944 276 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 FSHBP01225 129 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 EGR2P11161 476 aaPredicted RBP4.6□□□□□ -1.67
SEC22A-201ENST00000309934 ZFAND3Q9H8U3 227 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 HCFC1P51610 2035 aa4.6□□□□□ -1.67
SEC22A-201ENST00000309934 RBMY1BA6NDE4 496 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms