RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 LINC00315P59091 139 aa15.61■□□□□ 0.09
ATG4D-201ENST00000309469 RASL10AQ92737 203 aa15.61■□□□□ 0.09
ATG4D-201ENST00000309469 JPT2Q9H910 190 aa15.61■□□□□ 0.09
ATG4D-201ENST00000309469 IGLC3P0DOY3 106 aa15.6■□□□□ 0.09
ATG4D-201ENST00000309469 CMC4P56277 68 aaPredicted RBP15.6■□□□□ 0.09
ATG4D-201ENST00000309469 STHQ8IWL8 128 aa15.6■□□□□ 0.09
ATG4D-201ENST00000309469 LINC01545Q5VT33 79 aa15.59■□□□□ 0.09
ATG4D-201ENST00000309469 UQCR10Q9UDW1 63 aa15.59■□□□□ 0.09
ATG4D-201ENST00000309469 SETD2Q9BYW2 2564 aaPredicted RBP15.59■□□□□ 0.09
ATG4D-201ENST00000309469 SETXQ7Z333 2677 aaKnown RBP15.59■□□□□ 0.09
ATG4D-201ENST00000309469 MUC4Q99102 2169 aa15.59■□□□□ 0.09
ATG4D-201ENST00000309469 HTN1P15515 57 aa15.58■□□□□ 0.09
ATG4D-201ENST00000309469 FCER1GP30273 86 aa15.58■□□□□ 0.09
ATG4D-201ENST00000309469 M0R143 59 aa15.58■□□□□ 0.08
ATG4D-201ENST00000309469 IGLL1P15814 213 aa15.58■□□□□ 0.08
ATG4D-201ENST00000309469 NUTF2P61970 127 aaKnown RBP15.58■□□□□ 0.08
ATG4D-201ENST00000309469 C20orf78Q9BR46 151 aa15.58■□□□□ 0.08
ATG4D-201ENST00000309469 MCRIP2Q9BUT9 160 aaKnown RBP15.58■□□□□ 0.08
ATG4D-201ENST00000309469 HIVEP1P15822 2718 aa15.58■□□□□ 0.08
ATG4D-201ENST00000309469 A0A087WWL8 130 aa15.57■□□□□ 0.08
ATG4D-201ENST00000309469 INSP01308 110 aa15.57■□□□□ 0.08
ATG4D-201ENST00000309469 TRPT1Q86TN4 253 aaKnown RBP15.57■□□□□ 0.08
ATG4D-201ENST00000309469 RPL39LQ96EH5 51 aaKnown RBP15.57■□□□□ 0.08
ATG4D-201ENST00000309469 PPP1R17O96001 155 aa15.56■□□□□ 0.08
ATG4D-201ENST00000309469 PF4P02776 101 aa15.56■□□□□ 0.08
ATG4D-201ENST00000309469 SUMO2P61956 95 aaKnown RBP15.56■□□□□ 0.08
ATG4D-201ENST00000309469 SMIM2Q9BVW6 85 aa15.56■□□□□ 0.08
ATG4D-201ENST00000309469 SNHG12Q9BXW3 62 aa15.56■□□□□ 0.08
ATG4D-201ENST00000309469 ZNF876PQ49A33 203 aa15.56■□□□□ 0.08
ATG4D-201ENST00000309469 LINC01587Q99440 93 aa15.56■□□□□ 0.08
ATG4D-201ENST00000309469 LINC00467Q9BRT7 94 aa15.56■□□□□ 0.08
ATG4D-201ENST00000309469 NSD1Q96L73 2696 aaPredicted RBP15.56■□□□□ 0.08
ATG4D-201ENST00000309469 EREGO14944 169 aa15.55■□□□□ 0.08
ATG4D-201ENST00000309469 LAGE3Q14657 143 aa15.55■□□□□ 0.08
ATG4D-201ENST00000309469 BEAN1Q3B7T3 259 aa15.55■□□□□ 0.08
ATG4D-201ENST00000309469 LINC00482Q8N8I6 264 aa15.55■□□□□ 0.08
ATG4D-201ENST00000309469 IFI27L1Q96BM0 104 aa15.55■□□□□ 0.08
ATG4D-201ENST00000309469 PMCHL2Q9BQD1 86 aa15.55■□□□□ 0.08
ATG4D-201ENST00000309469 HSBP1L1C9JCN9 74 aa15.54■□□□□ 0.08
ATG4D-201ENST00000309469 TCAPO15273 167 aa15.54■□□□□ 0.08
ATG4D-201ENST00000309469 FN1P02751 2386 aaKnown RBP15.54■□□□□ 0.08
ATG4D-201ENST00000309469 PRM2P04554 102 aa15.54■□□□□ 0.08
ATG4D-201ENST00000309469 CRYGDP07320 174 aa15.54■□□□□ 0.08
ATG4D-201ENST00000309469 SUMO4Q6EEV6 95 aa15.54■□□□□ 0.08
ATG4D-201ENST00000309469 TMEM158Q8WZ71 300 aa15.54■□□□□ 0.08
ATG4D-201ENST00000309469 FAM110AQ9BQ89 295 aa15.54■□□□□ 0.08
ATG4D-201ENST00000309469 XCL2Q9UBD3 114 aa15.54■□□□□ 0.08
ATG4D-201ENST00000309469 hDV102S1A0JD36 115 aa15.53■□□□□ 0.08
ATG4D-201ENST00000309469 F5H697 171 aa15.53■□□□□ 0.08
ATG4D-201ENST00000309469 ST20Q9HBF5 79 aa15.53■□□□□ 0.08
ATG4D-201ENST00000309469 FAM74A4Q5TZK3 123 aa15.53■□□□□ 0.08
ATG4D-201ENST00000309469 Q6ZN92 141 aa15.53■□□□□ 0.08
ATG4D-201ENST00000309469 WNK1Q9H4A3 2382 aa15.52■□□□□ 0.08
ATG4D-201ENST00000309469 ZNF415Q09FC8 603 aa15.52■□□□□ 0.07
ATG4D-201ENST00000309469 LGALS9BQ3B8N2 356 aa15.51■□□□□ 0.07
ATG4D-201ENST00000309469 LGALS9CQ6DKI2 356 aa15.51■□□□□ 0.07
ATG4D-201ENST00000309469 C19orf73Q9NVV2 129 aa15.51■□□□□ 0.07
ATG4D-201ENST00000309469 HNRNPA3P51991 378 aaKnown RBP15.51■□□□□ 0.07
ATG4D-201ENST00000309469 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.51■□□□□ 0.07
ATG4D-201ENST00000309469 C18orf15Q96N68 181 aa15.5■□□□□ 0.07
ATG4D-201ENST00000309469 K7EMI3 77 aa15.49■□□□□ 0.07
ATG4D-201ENST00000309469 M0R2P5 195 aa15.49■□□□□ 0.07
ATG4D-201ENST00000309469 C1orf158Q8N1D5 194 aa15.49■□□□□ 0.07
ATG4D-201ENST00000309469 GOLT1BQ9Y3E0 138 aa15.49■□□□□ 0.07
ATG4D-201ENST00000309469 ZNF56Q15929 161 aa15.49■□□□□ 0.07
ATG4D-201ENST00000309469 ORMDL2Q53FV1 153 aa15.49■□□□□ 0.07
ATG4D-201ENST00000309469 C11orf72Q8NBR9 251 aa15.49■□□□□ 0.07
ATG4D-201ENST00000309469 TMEM208Q9BTX3 173 aa15.49■□□□□ 0.07
ATG4D-201ENST00000309469 CSTL1Q9H114 145 aa15.49■□□□□ 0.07
ATG4D-201ENST00000309469 NUDT3O95989 172 aa15.48■□□□□ 0.07
ATG4D-201ENST00000309469 RPL32P62910 135 aaKnown RBP15.48■□□□□ 0.07
ATG4D-201ENST00000309469 PTH2Q96A98 100 aa15.48■□□□□ 0.07
ATG4D-201ENST00000309469 WFDC10AQ9H1F0 79 aa15.48■□□□□ 0.07
ATG4D-201ENST00000309469 PIK3CD-AS1Q5SR53 167 aa15.47■□□□□ 0.07
ATG4D-201ENST00000309469 M0QY20 66 aa15.47■□□□□ 0.07
ATG4D-201ENST00000309469 TRBV6-5A0A0K0K1A5 114 aa15.46■□□□□ 0.07
ATG4D-201ENST00000309469 POLR2KP53803 58 aaKnown RBP15.46■□□□□ 0.07
ATG4D-201ENST00000309469 SPXQ9BT56 116 aa15.46■□□□□ 0.07
ATG4D-201ENST00000309469 NIPBLQ6KC79 2804 aaeCLIP15.45■□□□□ 0.06
ATG4D-201ENST00000309469 ATP5LO75964 103 aa15.45■□□□□ 0.06
ATG4D-201ENST00000309469 IGHV3OR16-12A0A075B7B8 117 aa15.45■□□□□ 0.06
ATG4D-201ENST00000309469 AZU1P20160 251 aa15.45■□□□□ 0.06
ATG4D-201ENST00000309469 CITED1Q99966 193 aa15.45■□□□□ 0.06
ATG4D-201ENST00000309469 C2CD3Q4AC94 2353 aa15.44■□□□□ 0.06
ATG4D-201ENST00000309469 A8MWV9 139 aa15.44■□□□□ 0.06
ATG4D-201ENST00000309469 VCYO14598 125 aa15.44■□□□□ 0.06
ATG4D-201ENST00000309469 GIG44P09565 113 aaPredicted RBP15.43■□□□□ 0.06
ATG4D-201ENST00000309469 RPL35AP18077 110 aaKnown RBP15.43■□□□□ 0.06
ATG4D-201ENST00000309469 MORN3Q6PF18 240 aaPredicted RBP15.43■□□□□ 0.06
ATG4D-201ENST00000309469 NEGR1Q7Z3B1 354 aa15.43■□□□□ 0.06
ATG4D-201ENST00000309469 MRPS16Q9Y3D3 137 aaKnown RBP15.43■□□□□ 0.06
ATG4D-201ENST00000309469 SDHAF1A6NFY7 115 aa15.43■□□□□ 0.06
ATG4D-201ENST00000309469 PRSS1P07477 247 aa15.43■□□□□ 0.06
ATG4D-201ENST00000309469 INSL3P51460 131 aa15.42■□□□□ 0.06
ATG4D-201ENST00000309469 TOMM6Q96B49 74 aa15.42■□□□□ 0.06
ATG4D-201ENST00000309469 BATFQ16520 125 aa15.41■□□□□ 0.06
ATG4D-201ENST00000309469 UFSP1Q6NVU6 142 aa15.41■□□□□ 0.06
ATG4D-201ENST00000309469 SLC25A34Q6PIV7 304 aa15.41■□□□□ 0.06
ATG4D-201ENST00000309469 SPATA3Q8NHX4 192 aa15.41■□□□□ 0.06
ATG4D-201ENST00000309469 MRPL16Q9NX20 251 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms