RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 LINC01559Q495D7 138 aa11.54□□□□□ -0.56
TFF3-201ENST00000291525 CST9LP1Q5W188 147 aa11.54□□□□□ -0.56
TFF3-201ENST00000291525 GRIFINA4D1Z8 144 aa11.53□□□□□ -0.56
TFF3-201ENST00000291525 AKR1C3P42330 323 aa11.53□□□□□ -0.56
TFF3-201ENST00000291525 CRIP1P50238 77 aa11.53□□□□□ -0.56
TFF3-201ENST00000291525 ZNF674Q2M3X9 581 aa11.53□□□□□ -0.56
TFF3-201ENST00000291525 KCNIP4Q6PIL6 250 aa11.53□□□□□ -0.56
TFF3-201ENST00000291525 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
TFF3-201ENST00000291525 ZFP82Q8N141 532 aa11.53□□□□□ -0.56
TFF3-201ENST00000291525 SFRP2Q96HF1 295 aa11.53□□□□□ -0.56
TFF3-201ENST00000291525 DAZ3Q9NR90 486 aaKnown RBP11.53□□□□□ -0.56
TFF3-201ENST00000291525 M0R381 172 aa11.52□□□□□ -0.57
TFF3-201ENST00000291525 LTAP01374 205 aa11.52□□□□□ -0.57
TFF3-201ENST00000291525 HAMPP81172 84 aa11.52□□□□□ -0.57
TFF3-201ENST00000291525 Q8N3U1 123 aa11.52□□□□□ -0.57
TFF3-201ENST00000291525 A0A087WWL8 130 aa11.51□□□□□ -0.57
TFF3-201ENST00000291525 TMSB15BA0A087X1C1 80 aa11.51□□□□□ -0.57
TFF3-201ENST00000291525 TRBV10-1A0A0K0K1A3 114 aa11.51□□□□□ -0.57
TFF3-201ENST00000291525 RPL36AP83881 106 aaKnown RBP11.51□□□□□ -0.57
TFF3-201ENST00000291525 ELOBQ15370 118 aa11.51□□□□□ -0.57
TFF3-201ENST00000291525 RGS21Q2M5E4 152 aa11.51□□□□□ -0.57
TFF3-201ENST00000291525 RPL36ALQ969Q0 106 aaKnown RBP11.51□□□□□ -0.57
TFF3-201ENST00000291525 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
TFF3-201ENST00000291525 CYTL1Q9NRR1 136 aa11.51□□□□□ -0.57
TFF3-201ENST00000291525 G3V3Q6 166 aa11.5□□□□□ -0.57
TFF3-201ENST00000291525 S100A9P06702 114 aaKnown RBP11.5□□□□□ -0.57
TFF3-201ENST00000291525 NIT1Q86X76 327 aa11.5□□□□□ -0.57
TFF3-201ENST00000291525 Q9UF83 564 aa11.5□□□□□ -0.57
TFF3-201ENST00000291525 A0A087WX48 190 aa11.49□□□□□ -0.57
TFF3-201ENST00000291525 WFDC2Q14508 124 aa11.49□□□□□ -0.57
TFF3-201ENST00000291525 DMBT1Q9UGM3 2413 aaPredicted RBP11.49□□□□□ -0.57
TFF3-201ENST00000291525 UMAD1C9J7I0 102 aa11.48□□□□□ -0.57
TFF3-201ENST00000291525 LECT2O14960 151 aa11.48□□□□□ -0.57
TFF3-201ENST00000291525 PAGE4O60829 102 aa11.48□□□□□ -0.57
TFF3-201ENST00000291525 PFDN1O60925 122 aa11.48□□□□□ -0.57
TFF3-201ENST00000291525 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.47□□□□□ -0.57
TFF3-201ENST00000291525 TRBV7-3A0A075B6L6 115 aa11.47□□□□□ -0.57
TFF3-201ENST00000291525 IGKV2D-24A0A075B6R9 120 aa11.47□□□□□ -0.57
TFF3-201ENST00000291525 CXCL1P09341 107 aa11.47□□□□□ -0.57
TFF3-201ENST00000291525 ZNF345Q14585 488 aa11.47□□□□□ -0.57
TFF3-201ENST00000291525 Q8N976 141 aa11.47□□□□□ -0.57
TFF3-201ENST00000291525 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.47□□□□□ -0.57
TFF3-201ENST00000291525 FAM30AQ9NZY2 134 aa11.47□□□□□ -0.57
TFF3-201ENST00000291525 KLK12Q9UKR0 248 aa11.47□□□□□ -0.57
TFF3-201ENST00000291525 VPS13BQ7Z7G8 4022 aa11.46□□□□□ -0.57
TFF3-201ENST00000291525 FAT1Q14517 4588 aa11.46□□□□□ -0.57
TFF3-201ENST00000291525 PLA2G1BP04054 148 aaKnown RBP11.46□□□□□ -0.57
TFF3-201ENST00000291525 UBE2D3P61077 147 aa11.46□□□□□ -0.57
TFF3-201ENST00000291525 UBE2D2P62837 147 aa11.46□□□□□ -0.57
TFF3-201ENST00000291525 Q0VG73 95 aa11.46□□□□□ -0.57
TFF3-201ENST00000291525 KCNRGQ8N5I3 272 aa11.46□□□□□ -0.57
TFF3-201ENST00000291525 FAM213BQ8TBF2 198 aa11.46□□□□□ -0.57
TFF3-201ENST00000291525 SFT2D1Q8WV19 159 aa11.46□□□□□ -0.57
TFF3-201ENST00000291525 BAALCQ8WXS3 180 aa11.46□□□□□ -0.57
TFF3-201ENST00000291525 RAB4BP61018 213 aa11.45□□□□□ -0.58
TFF3-201ENST00000291525 ZNF56Q15929 161 aa11.45□□□□□ -0.58
TFF3-201ENST00000291525 Q6ZSA8 131 aa11.45□□□□□ -0.58
TFF3-201ENST00000291525 MBD3L1Q8WWY6 194 aa11.45□□□□□ -0.58
TFF3-201ENST00000291525 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
TFF3-201ENST00000291525 ZNF471Q9BX82 626 aaPredicted RBP11.45□□□□□ -0.58
TFF3-201ENST00000291525 RBFOX3A6NFN3 312 aa11.44□□□□□ -0.58
TFF3-201ENST00000291525 EIF5AP63241 154 aaKnown RBP11.44□□□□□ -0.58
TFF3-201ENST00000291525 BAGE2Q86Y30 109 aa11.44□□□□□ -0.58
TFF3-201ENST00000291525 OR10G8Q8NGN5 311 aa11.44□□□□□ -0.58
TFF3-201ENST00000291525 A0A0D9SG52 128 aa11.43□□□□□ -0.58
TFF3-201ENST00000291525 SCO2A0A1W2PP80 73 aa11.43□□□□□ -0.58
TFF3-201ENST00000291525 KANTRA0A1W2PQU2 76 aa11.43□□□□□ -0.58
TFF3-201ENST00000291525 TMEM262E9PQX1 116 aa11.43□□□□□ -0.58
TFF3-201ENST00000291525 PKIAP61925 76 aa11.43□□□□□ -0.58
TFF3-201ENST00000291525 FLG2Q5D862 2391 aaPredicted RBP11.43□□□□□ -0.58
TFF3-201ENST00000291525 A0A1B0GV50 99 aa11.42□□□□□ -0.58
TFF3-201ENST00000291525 HMSDA8MTL9 139 aa11.42□□□□□ -0.58
TFF3-201ENST00000291525 SMLR1H3BR10 107 aa11.42□□□□□ -0.58
TFF3-201ENST00000291525 CRPP02741 224 aa11.42□□□□□ -0.58
TFF3-201ENST00000291525 C14orf177Q52M58 125 aa11.42□□□□□ -0.58
TFF3-201ENST00000291525 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
TFF3-201ENST00000291525 OR10AG1Q8NH19 301 aa11.42□□□□□ -0.58
TFF3-201ENST00000291525 C1orf43Q9BWL3 253 aa11.42□□□□□ -0.58
TFF3-201ENST00000291525 TRBV6-8A0A0A6YYG3 113 aa11.41□□□□□ -0.58
TFF3-201ENST00000291525 BCL2L11O43521 198 aa11.41□□□□□ -0.58
TFF3-201ENST00000291525 SNAI2O43623 268 aa11.41□□□□□ -0.58
TFF3-201ENST00000291525 OR5AL1P0C617 328 aa11.41□□□□□ -0.58
TFF3-201ENST00000291525 RPL19P84098 196 aaKnown RBP11.41□□□□□ -0.58
TFF3-201ENST00000291525 TMEM97Q5BJF2 176 aa11.41□□□□□ -0.58
TFF3-201ENST00000291525 ATRAIDQ6UW56 229 aa11.41□□□□□ -0.58
TFF3-201ENST00000291525 LINC00528Q8N1L1 170 aa11.41□□□□□ -0.58
TFF3-201ENST00000291525 NEXN-AS1Q8NBZ9 246 aa11.41□□□□□ -0.58
TFF3-201ENST00000291525 MLST8Q9BVC4 326 aa11.41□□□□□ -0.58
TFF3-201ENST00000291525 SRRM2Q9UQ35 2752 aaKnown RBP11.4□□□□□ -0.58
TFF3-201ENST00000291525 H2AFB1P0C5Y9 115 aa11.4□□□□□ -0.58
TFF3-201ENST00000291525 SMIM17P0DL12 118 aa11.4□□□□□ -0.58
TFF3-201ENST00000291525 PRR27Q6MZM9 219 aa11.4□□□□□ -0.58
TFF3-201ENST00000291525 F5H697 171 aa11.39□□□□□ -0.59
TFF3-201ENST00000291525 J3QL48 77 aa11.39□□□□□ -0.59
TFF3-201ENST00000291525 DNAJC30Q96LL9 226 aa11.39□□□□□ -0.59
TFF3-201ENST00000291525 AP1S3Q96PC3 154 aa11.39□□□□□ -0.59
TFF3-201ENST00000291525 SSBP4Q9BWG4 385 aaPredicted RBP11.39□□□□□ -0.59
TFF3-201ENST00000291525 TMUB2Q71RG4 321 aa11.38□□□□□ -0.59
TFF3-201ENST00000291525 C15orf54Q8N8G6 183 aa11.38□□□□□ -0.59
TFF3-201ENST00000291525 CHCHD5Q9BSY4 110 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms