RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 RHOHQ15669 191 aa18.62■□□□□ 0.57
SSU72-201ENST00000291386 CT83Q5H943 113 aa18.62■□□□□ 0.57
SSU72-201ENST00000291386 SOHLH1Q5JUK2 328 aa18.62■□□□□ 0.57
SSU72-201ENST00000291386 LINC00588Q9Y4M8 146 aa18.62■□□□□ 0.57
SSU72-201ENST00000291386 CACNG7P62955 275 aa18.61■□□□□ 0.57
SSU72-201ENST00000291386 ESRGQ1W209 222 aa18.61■□□□□ 0.57
SSU72-201ENST00000291386 PRADC1Q9BSG0 188 aa18.61■□□□□ 0.57
SSU72-201ENST00000291386 OSTCQ9NRP0 149 aa18.61■□□□□ 0.57
SSU72-201ENST00000291386 RPL23P62829 140 aaKnown RBP18.6■□□□□ 0.57
SSU72-201ENST00000291386 WDR73Q6P4I2 378 aa18.6■□□□□ 0.57
SSU72-201ENST00000291386 MUC21A0A0G2JKD1 596 aa18.59■□□□□ 0.57
SSU72-201ENST00000291386 MUC21A0A140T8X8 626 aa18.59■□□□□ 0.57
SSU72-201ENST00000291386 SRIP30626 198 aa18.59■□□□□ 0.57
SSU72-201ENST00000291386 CTRLP40313 264 aa18.59■□□□□ 0.57
SSU72-201ENST00000291386 LYZL1Q6UWQ5 148 aa18.59■□□□□ 0.57
SSU72-201ENST00000291386 Q6ZSN1 163 aa18.59■□□□□ 0.57
SSU72-201ENST00000291386 NEGR1Q7Z3B1 354 aa18.59■□□□□ 0.57
SSU72-201ENST00000291386 ISOC2Q96AB3 205 aa18.59■□□□□ 0.57
SSU72-201ENST00000291386 TPPP3Q9BW30 176 aa18.59■□□□□ 0.57
SSU72-201ENST00000291386 A0A087WWL8 130 aa18.58■□□□□ 0.56
SSU72-201ENST00000291386 A8MWL6 223 aa18.58■□□□□ 0.56
SSU72-201ENST00000291386 FAM74A4Q5TZK3 123 aa18.58■□□□□ 0.56
SSU72-201ENST00000291386 SH2D6Q7Z4S9 175 aa18.58■□□□□ 0.56
SSU72-201ENST00000291386 UPK3BQ9BT76 320 aa18.58■□□□□ 0.56
SSU72-201ENST00000291386 CNFNQ9BYD5 112 aa18.58■□□□□ 0.56
SSU72-201ENST00000291386 LOC100131303A0A0U1RQF7 123 aa18.57■□□□□ 0.56
SSU72-201ENST00000291386 FOXA3P55318 350 aaPredicted RBP18.57■□□□□ 0.56
SSU72-201ENST00000291386 ZNRF2Q8NHG8 242 aa18.57■□□□□ 0.56
SSU72-201ENST00000291386 MRPS16Q9Y3D3 137 aaKnown RBP18.57■□□□□ 0.56
SSU72-201ENST00000291386 GTSF1Q8WW33 167 aa18.56■□□□□ 0.56
SSU72-201ENST00000291386 KIF25-AS1Q9Y6Z4 181 aa18.56■□□□□ 0.56
SSU72-201ENST00000291386 LYPD5Q6UWN5 251 aa18.55■□□□□ 0.56
SSU72-201ENST00000291386 AP1S3Q96PC3 154 aa18.55■□□□□ 0.56
SSU72-201ENST00000291386 ADIRFQ15847 76 aa18.54■□□□□ 0.56
SSU72-201ENST00000291386 C15orf54Q8N8G6 183 aa18.54■□□□□ 0.56
SSU72-201ENST00000291386 GFRA4Q9GZZ7 299 aa18.54■□□□□ 0.56
SSU72-201ENST00000291386 FAM231BA6NCW3 169 aa18.53■□□□□ 0.56
SSU72-201ENST00000291386 RAB4BP61018 213 aa18.53■□□□□ 0.56
SSU72-201ENST00000291386 SSTP61278 116 aa18.53■□□□□ 0.56
SSU72-201ENST00000291386 C14orf178Q8N769 122 aaPredicted RBP18.53■□□□□ 0.56
SSU72-201ENST00000291386 TSKUQ8WUA8 353 aa18.53■□□□□ 0.56
SSU72-201ENST00000291386 MSRB1Q9NZV6 116 aa18.53■□□□□ 0.56
SSU72-201ENST00000291386 V9GYV3 84 aa18.53■□□□□ 0.56
SSU72-201ENST00000291386 LINC00694P0DN24 101 aa18.52■□□□□ 0.56
SSU72-201ENST00000291386 NTF3P20783 257 aa18.52■□□□□ 0.56
SSU72-201ENST00000291386 TIRAPP58753 221 aa18.52■□□□□ 0.56
SSU72-201ENST00000291386 UQCC3Q6UW78 93 aa18.52■□□□□ 0.56
SSU72-201ENST00000291386 LINC00315P59091 139 aa18.51■□□□□ 0.55
SSU72-201ENST00000291386 TRBV10-1A0A0K0K1A3 114 aa18.5■□□□□ 0.55
SSU72-201ENST00000291386 TRGC1P0CF51 173 aa18.5■□□□□ 0.55
SSU72-201ENST00000291386 SMIM17P0DL12 118 aa18.5■□□□□ 0.55
SSU72-201ENST00000291386 OR10G8Q8NGN5 311 aa18.5■□□□□ 0.55
SSU72-201ENST00000291386 ZNF56Q15929 161 aa18.48■□□□□ 0.55
SSU72-201ENST00000291386 Q9H8V8 135 aa18.48■□□□□ 0.55
SSU72-201ENST00000291386 Q6ZR54 194 aa18.47■□□□□ 0.55
SSU72-201ENST00000291386 Q9UF83 564 aa18.47■□□□□ 0.55
SSU72-201ENST00000291386 IGLV2-18A0A075B6J9 118 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 GAGE12JA6NER3 117 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 EVI2AP22794 236 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 GAGE1Q13065 139 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 GAGE4Q13068 117 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 GAGE5Q13069 117 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 TWIST1Q15672 202 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 GAGE13Q4V321 117 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 ATP6V0E2Q8NHE4 81 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 PGLYRP4Q96LB8 373 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 DPH3P1Q9H4G8 78 aa18.46■□□□□ 0.55
SSU72-201ENST00000291386 HIGD1CA8MV81 97 aa18.45■□□□□ 0.54
SSU72-201ENST00000291386 PNRC1Q12796 327 aaPredicted RBP18.45■□□□□ 0.54
SSU72-201ENST00000291386 GTSF1LQ9H1H1 148 aa18.44■□□□□ 0.54
SSU72-201ENST00000291386 NBDYA0A0U1RRE5 68 aa18.43■□□□□ 0.54
SSU72-201ENST00000291386 LINC00862A6NCI5 91 aa18.43■□□□□ 0.54
SSU72-201ENST00000291386 F5H697 171 aa18.43■□□□□ 0.54
SSU72-201ENST00000291386 BORCS7Q96B45 105 aa18.43■□□□□ 0.54
SSU72-201ENST00000291386 RPL36AP83881 106 aaKnown RBP18.42■□□□□ 0.54
SSU72-201ENST00000291386 RPL36ALQ969Q0 106 aaKnown RBP18.42■□□□□ 0.54
SSU72-201ENST00000291386 TRBV7-3A0A075B6L6 115 aa18.41■□□□□ 0.54
SSU72-201ENST00000291386 SMIM27A0A1W2PRY6 76 aa18.41■□□□□ 0.54
SSU72-201ENST00000291386 TMEM218A2RU14 115 aa18.41■□□□□ 0.54
SSU72-201ENST00000291386 M0R2N4 97 aa18.41■□□□□ 0.54
SSU72-201ENST00000291386 NAT8BQ9UHF3 227 aa18.41■□□□□ 0.54
SSU72-201ENST00000291386 A0A1B0GUT8 65 aa18.4■□□□□ 0.54
SSU72-201ENST00000291386 SIVA1O15304 175 aa18.4■□□□□ 0.54
SSU72-201ENST00000291386 UBE2D3P61077 147 aa18.4■□□□□ 0.54
SSU72-201ENST00000291386 UBE2D2P62837 147 aa18.4■□□□□ 0.54
SSU72-201ENST00000291386 COMMD7Q86VX2 200 aa18.4■□□□□ 0.54
SSU72-201ENST00000291386 NEXN-AS1Q8NBZ9 246 aa18.4■□□□□ 0.54
SSU72-201ENST00000291386 NUP35Q8NFH5 326 aa18.4■□□□□ 0.54
SSU72-201ENST00000291386 H7C1H1 209 aa18.39■□□□□ 0.53
SSU72-201ENST00000291386 M0QY20 66 aa18.39■□□□□ 0.53
SSU72-201ENST00000291386 MGPP08493 103 aa18.39■□□□□ 0.53
SSU72-201ENST00000291386 LELP1Q5T871 98 aa18.39■□□□□ 0.53
SSU72-201ENST00000291386 PPP1R2P9O14990 202 aa18.38■□□□□ 0.53
SSU72-201ENST00000291386 SUMO4Q6EEV6 95 aa18.38■□□□□ 0.53
SSU72-201ENST00000291386 SMIM15Q7Z3B0 74 aa18.38■□□□□ 0.53
SSU72-201ENST00000291386 DNAH10Q8IVF4 4471 aa18.38■□□□□ 0.53
SSU72-201ENST00000291386 ADCYAP1P18509 176 aa18.37■□□□□ 0.53
SSU72-201ENST00000291386 TTC32Q5I0X7 151 aa18.37■□□□□ 0.53
SSU72-201ENST00000291386 WFDC10BQ8IUB3 73 aa18.36■□□□□ 0.53
SSU72-201ENST00000291386 DNAJC30Q96LL9 226 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms