RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 GAGE12JA6NER3 117 aa12.82□□□□□ -0.36
MALSU1-201ENST00000287543 MEF2BQ02080 365 aaPredicted RBP12.82□□□□□ -0.36
MALSU1-201ENST00000287543 GAGE1Q13065 139 aa12.82□□□□□ -0.36
MALSU1-201ENST00000287543 GAGE4Q13068 117 aa12.82□□□□□ -0.36
MALSU1-201ENST00000287543 GAGE5Q13069 117 aa12.82□□□□□ -0.36
MALSU1-201ENST00000287543 GAGE13Q4V321 117 aa12.82□□□□□ -0.36
MALSU1-201ENST00000287543 FAM74A4Q5TZK3 123 aa12.82□□□□□ -0.36
MALSU1-201ENST00000287543 PRR27Q6MZM9 219 aa12.82□□□□□ -0.36
MALSU1-201ENST00000287543 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
MALSU1-201ENST00000287543 TRBV10-1A0A0K0K1A3 114 aa12.81□□□□□ -0.36
MALSU1-201ENST00000287543 DAZAP1Q96EP5 407 aaKnown RBP12.81□□□□□ -0.36
MALSU1-201ENST00000287543 SSBP4Q9BWG4 385 aaPredicted RBP12.81□□□□□ -0.36
MALSU1-201ENST00000287543 BIN3Q9NQY0 253 aa12.81□□□□□ -0.36
MALSU1-201ENST00000287543 KIAA1109Q2LD37 5005 aa12.8□□□□□ -0.36
MALSU1-201ENST00000287543 A0A087WWL8 130 aa12.8□□□□□ -0.36
MALSU1-201ENST00000287543 IBA57-AS1B1ANH7 110 aa12.8□□□□□ -0.36
MALSU1-201ENST00000287543 OR5AL1P0C617 328 aa12.8□□□□□ -0.36
MALSU1-201ENST00000287543 LINC00694P0DN24 101 aa12.8□□□□□ -0.36
MALSU1-201ENST00000287543 C14orf178Q8N769 122 aaPredicted RBP12.8□□□□□ -0.36
MALSU1-201ENST00000287543 VAX2Q9UIW0 290 aa12.8□□□□□ -0.36
MALSU1-201ENST00000287543 TNFRSF18Q9Y5U5 241 aa12.8□□□□□ -0.36
MALSU1-201ENST00000287543 PKHD1P08F94 4074 aa12.79□□□□□ -0.36
MALSU1-201ENST00000287543 SNAI2O43623 268 aa12.79□□□□□ -0.36
MALSU1-201ENST00000287543 CDK2AP2O75956 126 aa12.79□□□□□ -0.36
MALSU1-201ENST00000287543 BCL2P10415 239 aa12.79□□□□□ -0.36
MALSU1-201ENST00000287543 GNG4P50150 75 aa12.79□□□□□ -0.36
MALSU1-201ENST00000287543 RPS20P60866 119 aaKnown RBP12.79□□□□□ -0.36
MALSU1-201ENST00000287543 CENPWQ5EE01 88 aa12.79□□□□□ -0.36
MALSU1-201ENST00000287543 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
MALSU1-201ENST00000287543 C9orf62Q8N4C0 152 aa12.79□□□□□ -0.36
MALSU1-201ENST00000287543 MED9Q9NWA0 146 aa12.79□□□□□ -0.36
MALSU1-201ENST00000287543 RAB4BP61018 213 aa12.78□□□□□ -0.36
MALSU1-201ENST00000287543 RPL36AP83881 106 aaKnown RBP12.78□□□□□ -0.36
MALSU1-201ENST00000287543 RPL19P84098 196 aaKnown RBP12.78□□□□□ -0.36
MALSU1-201ENST00000287543 RPL36ALQ969Q0 106 aaKnown RBP12.78□□□□□ -0.36
MALSU1-201ENST00000287543 DERL1Q9BUN8 251 aa12.78□□□□□ -0.36
MALSU1-201ENST00000287543 hCG_2014768A0A024R1R8 64 aa12.77□□□□□ -0.37
MALSU1-201ENST00000287543 XKRY2A2RUG3 117 aa12.77□□□□□ -0.37
MALSU1-201ENST00000287543 CDPF1Q6NVV7 123 aa12.77□□□□□ -0.37
MALSU1-201ENST00000287543 A0A087WTM6 91 aa12.76□□□□□ -0.37
MALSU1-201ENST00000287543 KRTAP10-2P60368 255 aa12.76□□□□□ -0.37
MALSU1-201ENST00000287543 BLOC1S1P78537 153 aa12.76□□□□□ -0.37
MALSU1-201ENST00000287543 LAGE3Q14657 143 aa12.76□□□□□ -0.37
MALSU1-201ENST00000287543 OR10AG1Q8NH19 301 aa12.76□□□□□ -0.37
MALSU1-201ENST00000287543 PSCAO43653 123 aa12.75□□□□□ -0.37
MALSU1-201ENST00000287543 IGHV3-30P01768 117 aa12.75□□□□□ -0.37
MALSU1-201ENST00000287543 IGHV3-33P01772 117 aa12.75□□□□□ -0.37
MALSU1-201ENST00000287543 SMIM17P0DL12 118 aa12.75□□□□□ -0.37
MALSU1-201ENST00000287543 IGHV3-30-3P0DP02 117 aa12.75□□□□□ -0.37
MALSU1-201ENST00000287543 IGHV3-30-5P0DP03 117 aa12.75□□□□□ -0.37
MALSU1-201ENST00000287543 TOR2AQ5JU69 321 aa12.75□□□□□ -0.37
MALSU1-201ENST00000287543 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.75□□□□□ -0.37
MALSU1-201ENST00000287543 TRBV7-3A0A075B6L6 115 aa12.74□□□□□ -0.37
MALSU1-201ENST00000287543 RAB19A4D1S5 217 aa12.74□□□□□ -0.37
MALSU1-201ENST00000287543 IGLV2-8P01709 118 aa12.74□□□□□ -0.37
MALSU1-201ENST00000287543 OR2D3Q8NGH3 330 aa12.74□□□□□ -0.37
MALSU1-201ENST00000287543 OR10G8Q8NGN5 311 aa12.74□□□□□ -0.37
MALSU1-201ENST00000287543 TM2D2Q9BX73 214 aa12.74□□□□□ -0.37
MALSU1-201ENST00000287543 Q9UF83 564 aa12.74□□□□□ -0.37
MALSU1-201ENST00000287543 C19orf71A6NCJ1 209 aa12.73□□□□□ -0.37
MALSU1-201ENST00000287543 F2Z2F3 143 aa12.73□□□□□ -0.37
MALSU1-201ENST00000287543 P01737 135 aa12.73□□□□□ -0.37
MALSU1-201ENST00000287543 ZNF56Q15929 161 aa12.73□□□□□ -0.37
MALSU1-201ENST00000287543 AP1S3Q96PC3 154 aa12.73□□□□□ -0.37
MALSU1-201ENST00000287543 URGCP-MRPS24S4R325 110 aa12.73□□□□□ -0.37
MALSU1-201ENST00000287543 TRAV8-3A0A0A6YYJ7 113 aa12.72□□□□□ -0.37
MALSU1-201ENST00000287543 CACNG7P62955 275 aa12.72□□□□□ -0.37
MALSU1-201ENST00000287543 FER1L6-AS1Q8NA97 138 aa12.72□□□□□ -0.37
MALSU1-201ENST00000287543 F5H697 171 aa12.71□□□□□ -0.37
MALSU1-201ENST00000287543 UBE2D3P61077 147 aa12.71□□□□□ -0.37
MALSU1-201ENST00000287543 UBE2D2P62837 147 aa12.71□□□□□ -0.37
MALSU1-201ENST00000287543 KCNIP4Q6PIL6 250 aa12.71□□□□□ -0.37
MALSU1-201ENST00000287543 CHCHD7Q9BUK0 85 aa12.71□□□□□ -0.37
MALSU1-201ENST00000287543 IGLC6P0CF74 106 aa12.7□□□□□ -0.38
MALSU1-201ENST00000287543 ELOBQ15370 118 aa12.7□□□□□ -0.38
MALSU1-201ENST00000287543 ALKAL2Q6UX46 152 aa12.7□□□□□ -0.38
MALSU1-201ENST00000287543 TPPP3Q9BW30 176 aa12.7□□□□□ -0.38
MALSU1-201ENST00000287543 Q9HAA7 133 aa12.7□□□□□ -0.38
MALSU1-201ENST00000287543 COX11Q9Y6N1 276 aa12.7□□□□□ -0.38
MALSU1-201ENST00000287543 MUC21A0A0G2JKD1 596 aa12.69□□□□□ -0.38
MALSU1-201ENST00000287543 MUC21A0A140T8X8 626 aa12.69□□□□□ -0.38
MALSU1-201ENST00000287543 TMEM250H0YL14 139 aa12.69□□□□□ -0.38
MALSU1-201ENST00000287543 TMEM97Q5BJF2 176 aa12.69□□□□□ -0.38
MALSU1-201ENST00000287543 TRBV20OR9-2A0A075B6H5 130 aa12.68□□□□□ -0.38
MALSU1-201ENST00000287543 A0A087WX48 190 aa12.68□□□□□ -0.38
MALSU1-201ENST00000287543 RBFOX3A6NFN3 312 aa12.68□□□□□ -0.38
MALSU1-201ENST00000287543 SSTP61278 116 aa12.68□□□□□ -0.38
MALSU1-201ENST00000287543 WDR73Q6P4I2 378 aa12.68□□□□□ -0.38
MALSU1-201ENST00000287543 LYPD6BQ8NI32 183 aa12.68□□□□□ -0.38
MALSU1-201ENST00000287543 H7C1H1 209 aa12.67□□□□□ -0.38
MALSU1-201ENST00000287543 GZMBP10144 247 aa12.67□□□□□ -0.38
MALSU1-201ENST00000287543 PKIAP61925 76 aa12.67□□□□□ -0.38
MALSU1-201ENST00000287543 NIT1Q86X76 327 aa12.67□□□□□ -0.38
MALSU1-201ENST00000287543 NEXN-AS1Q8NBZ9 246 aa12.67□□□□□ -0.38
MALSU1-201ENST00000287543 NTN5Q8WTR8 489 aaPredicted RBP12.67□□□□□ -0.38
MALSU1-201ENST00000287543 RMI2Q96E14 147 aa12.67□□□□□ -0.38
MALSU1-201ENST00000287543 KIF25-AS1Q9Y6Z4 181 aa12.67□□□□□ -0.38
MALSU1-201ENST00000287543 TRBV6-8A0A0A6YYG3 113 aa12.66□□□□□ -0.38
MALSU1-201ENST00000287543 LRCOL1A6NCL2 159 aa12.66□□□□□ -0.38
MALSU1-201ENST00000287543 NDUFS6O75380 124 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms