RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 HIST1H4AP62805 103 aaKnown RBP12.1□□□□□ -0.47
USP43-201ENST00000285199 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
USP43-201ENST00000285199 RNF183Q96D59 192 aa12.1□□□□□ -0.47
USP43-201ENST00000285199 SPANXB1Q9NS25 103 aaPredicted RBP12.1□□□□□ -0.47
USP43-201ENST00000285199 MUSTN1Q8IVN3 82 aa12.1□□□□□ -0.47
USP43-201ENST00000285199 BAALCQ8WXS3 180 aa12.1□□□□□ -0.47
USP43-201ENST00000285199 CARD19Q96LW7 228 aa12.1□□□□□ -0.47
USP43-201ENST00000285199 HIGD1BQ9P298 99 aa12.1□□□□□ -0.47
USP43-201ENST00000285199 WI2-2373I1.2A0A1W2PRP0 233 aa12.09□□□□□ -0.47
USP43-201ENST00000285199 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
USP43-201ENST00000285199 IFITM1P13164 125 aa12.09□□□□□ -0.47
USP43-201ENST00000285199 TEN1Q86WV5 123 aa12.09□□□□□ -0.47
USP43-201ENST00000285199 PIP4P2Q8N4L2 257 aa12.09□□□□□ -0.47
USP43-201ENST00000285199 PAX4O43316 350 aa12.08□□□□□ -0.47
USP43-201ENST00000285199 ZNF48Q96MX3 618 aaPredicted RBP12.08□□□□□ -0.47
USP43-201ENST00000285199 GAGE12JA6NER3 117 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 INS-IGF2F8WCM5 200 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 GAGE7O76087 117 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 GAGE12FP0CL80 117 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 GAGE12GP0CL81 117 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 GAGE12IP0CL82 117 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 GAGE4Q13068 117 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 TMEM101Q96IK0 257 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 BLCAPP62952 87 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 CFHR3Q02985 330 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 XCL2Q9UBD3 114 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 HOXB4P17483 251 aaPredicted RBP12.08□□□□□ -0.48
USP43-201ENST00000285199 UBE2E1P51965 193 aa12.08□□□□□ -0.48
USP43-201ENST00000285199 TRBV12-3P01733 135 aa12.07□□□□□ -0.48
USP43-201ENST00000285199 CEP192Q8TEP8 1941 aa12.07□□□□□ -0.48
USP43-201ENST00000285199 E9PLD3 99 aa12.07□□□□□ -0.48
USP43-201ENST00000285199 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.07□□□□□ -0.48
USP43-201ENST00000285199 IGKV2-29A2NJV5 120 aaPredicted RBP12.07□□□□□ -0.48
USP43-201ENST00000285199 GAGE5Q13069 117 aa12.07□□□□□ -0.48
USP43-201ENST00000285199 GAGE6Q13070 117 aa12.07□□□□□ -0.48
USP43-201ENST00000285199 UNQ9165/PRO28630Q6UXU0 137 aa12.07□□□□□ -0.48
USP43-201ENST00000285199 CHCHD5Q9BSY4 110 aa12.07□□□□□ -0.48
USP43-201ENST00000285199 CEMP1Q6PRD7 247 aaPredicted RBP12.06□□□□□ -0.48
USP43-201ENST00000285199 YAE1D1Q9NRH1 226 aa12.06□□□□□ -0.48
USP43-201ENST00000285199 TCL1BO95988 128 aa12.06□□□□□ -0.48
USP43-201ENST00000285199 IGFL3Q6UXB1 125 aa12.06□□□□□ -0.48
USP43-201ENST00000285199 CENPEQ02224 2701 aa12.06□□□□□ -0.48
USP43-201ENST00000285199 TRGV11A0A075B6L2 103 aa12.06□□□□□ -0.48
USP43-201ENST00000285199 SUMO4Q6EEV6 95 aa12.06□□□□□ -0.48
USP43-201ENST00000285199 Q8N9W7 124 aa12.06□□□□□ -0.48
USP43-201ENST00000285199 C9orf153Q5TBE3 101 aa12.05□□□□□ -0.48
USP43-201ENST00000285199 C8orf31Q8N9H6 132 aa12.05□□□□□ -0.48
USP43-201ENST00000285199 PRSS47A8MTI9 375 aa12.05□□□□□ -0.48
USP43-201ENST00000285199 IGLC6P0CF74 106 aa12.05□□□□□ -0.48
USP43-201ENST00000285199 PFN2P35080 140 aa12.05□□□□□ -0.48
USP43-201ENST00000285199 USP34Q70CQ2 3546 aa12.04□□□□□ -0.48
USP43-201ENST00000285199 ZFP36P26651 326 aaKnown RBP12.04□□□□□ -0.48
USP43-201ENST00000285199 RNF185Q96GF1 192 aa12.04□□□□□ -0.48
USP43-201ENST00000285199 HOXD3P31249 432 aaPredicted RBP12.04□□□□□ -0.48
USP43-201ENST00000285199 I3L3M4 83 aa12.04□□□□□ -0.48
USP43-201ENST00000285199 IGFL2Q6UWQ7 119 aa12.04□□□□□ -0.48
USP43-201ENST00000285199 TMEM141Q96I45 108 aa12.04□□□□□ -0.48
USP43-201ENST00000285199 CLEC2BQ92478 149 aa12.03□□□□□ -0.48
USP43-201ENST00000285199 EYSQ5T1H1 3165 aa12.03□□□□□ -0.48
USP43-201ENST00000285199 IGHV1OR15-1A0A075B7D0 117 aa12.03□□□□□ -0.48
USP43-201ENST00000285199 MORN3Q6PF18 240 aaPredicted RBP12.03□□□□□ -0.48
USP43-201ENST00000285199 STHQ8IWL8 128 aa12.03□□□□□ -0.48
USP43-201ENST00000285199 C11orf21Q9P2W6 132 aa12.03□□□□□ -0.48
USP43-201ENST00000285199 HTN3P15516 51 aa12.03□□□□□ -0.48
USP43-201ENST00000285199 PRRC2AP48634 2157 aaKnown RBP12.02□□□□□ -0.48
USP43-201ENST00000285199 Q6ZUT4 128 aa12.02□□□□□ -0.48
USP43-201ENST00000285199 COPS9Q8WXC6 57 aa12.02□□□□□ -0.48
USP43-201ENST00000285199 PTPRBP23467 1997 aa12.02□□□□□ -0.49
USP43-201ENST00000285199 A0A096LNJ9 63 aa12.02□□□□□ -0.49
USP43-201ENST00000285199 TM2D2Q9BX73 214 aa12.02□□□□□ -0.49
USP43-201ENST00000285199 ZNRF2Q8NHG8 242 aa12.02□□□□□ -0.49
USP43-201ENST00000285199 TMEM190Q8WZ59 177 aa12.02□□□□□ -0.49
USP43-201ENST00000285199 LINC00574Q9H8X3 128 aa12.02□□□□□ -0.49
USP43-201ENST00000285199 FAM223BA6NKX1 122 aa12.01□□□□□ -0.49
USP43-201ENST00000285199 UCNP55089 124 aa12.01□□□□□ -0.49
USP43-201ENST00000285199 FAM223AQ8IWN6 122 aa12.01□□□□□ -0.49
USP43-201ENST00000285199 TRGV4A0A0C4DH28 118 aa12.01□□□□□ -0.49
USP43-201ENST00000285199 SMAD5-AS1Q9Y6J3 95 aa12.01□□□□□ -0.49
USP43-201ENST00000285199 ZNF462Q96JM2 2506 aa12.01□□□□□ -0.49
USP43-201ENST00000285199 CRPP02741 224 aa12.01□□□□□ -0.49
USP43-201ENST00000285199 USMG5Q96IX5 58 aa12.01□□□□□ -0.49
USP43-201ENST00000285199 TNRC6BQ9UPQ9 1833 aaKnown RBP12.01□□□□□ -0.49
USP43-201ENST00000285199 NDUFA11Q86Y39 141 aa12□□□□□ -0.49
USP43-201ENST00000285199 MDFICQ9P1T7 246 aa12□□□□□ -0.49
USP43-201ENST00000285199 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
USP43-201ENST00000285199 LINC01620Q4KN68 170 aa12□□□□□ -0.49
USP43-201ENST00000285199 RASL10AQ92737 203 aa12□□□□□ -0.49
USP43-201ENST00000285199 UFSP1Q6NVU6 142 aa12□□□□□ -0.49
USP43-201ENST00000285199 DEFB136Q30KP8 78 aa12□□□□□ -0.49
USP43-201ENST00000285199 NPBQ8NG41 125 aa12□□□□□ -0.49
USP43-201ENST00000285199 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
USP43-201ENST00000285199 TINCRA0A1B0GVN0 87 aa11.99□□□□□ -0.49
USP43-201ENST00000285199 NDUFA4O00483 81 aa11.99□□□□□ -0.49
USP43-201ENST00000285199 TOMM6Q96B49 74 aa11.99□□□□□ -0.49
USP43-201ENST00000285199 EXPH5Q8NEV8 1989 aa11.99□□□□□ -0.49
USP43-201ENST00000285199 RPL35AP18077 110 aaKnown RBP11.99□□□□□ -0.49
USP43-201ENST00000285199 AJUBAQ96IF1 538 aa11.99□□□□□ -0.49
USP43-201ENST00000285199 COL6A3P12111 3177 aa11.99□□□□□ -0.49
USP43-201ENST00000285199 P0DMU3 169 aa11.98□□□□□ -0.49
USP43-201ENST00000285199 FAM231AP0DMU4 169 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms