RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 A0A096LNJ9 63 aa16.07■□□□□ 0.16
CCDC7-201ENST00000277657 GIG44P09565 113 aaPredicted RBP16.07■□□□□ 0.16
CCDC7-201ENST00000277657 ZNF415Q09FC8 603 aa16.07■□□□□ 0.16
CCDC7-201ENST00000277657 KRTAP24-1Q3LI83 254 aa16.07■□□□□ 0.16
CCDC7-201ENST00000277657 ZNF876PQ49A33 203 aa16.07■□□□□ 0.16
CCDC7-201ENST00000277657 C11orf72Q8NBR9 251 aa16.07■□□□□ 0.16
CCDC7-201ENST00000277657 Q8N8P6 123 aa16.06■□□□□ 0.16
CCDC7-201ENST00000277657 A0A087WWL8 130 aa16.05■□□□□ 0.16
CCDC7-201ENST00000277657 CRYGDP07320 174 aa16.05■□□□□ 0.16
CCDC7-201ENST00000277657 PTH2Q96A98 100 aa16.05■□□□□ 0.16
CCDC7-201ENST00000277657 PCP4L1A6NKN8 68 aa16.05■□□□□ 0.16
CCDC7-201ENST00000277657 PIK3CD-AS1Q5SR53 167 aa16.05■□□□□ 0.16
CCDC7-201ENST00000277657 LINC00173Q6ZV60 143 aa16.05■□□□□ 0.16
CCDC7-201ENST00000277657 WFDC9Q8NEX5 89 aa16.05■□□□□ 0.16
CCDC7-201ENST00000277657 BTF3P20290 206 aaKnown RBP16.04■□□□□ 0.16
CCDC7-201ENST00000277657 C20orf78Q9BR46 151 aa16.04■□□□□ 0.16
CCDC7-201ENST00000277657 M0R2P5 195 aa16.03■□□□□ 0.16
CCDC7-201ENST00000277657 S100A12P80511 92 aa16.03■□□□□ 0.16
CCDC7-201ENST00000277657 TMEM208Q9BTX3 173 aa16.03■□□□□ 0.16
CCDC7-201ENST00000277657 HSPB8Q9UJY1 196 aa16.03■□□□□ 0.16
CCDC7-201ENST00000277657 PPP1R17O96001 155 aa16.03■□□□□ 0.16
CCDC7-201ENST00000277657 MORN3Q6PF18 240 aaPredicted RBP16.03■□□□□ 0.16
CCDC7-201ENST00000277657 RPL39LQ96EH5 51 aaKnown RBP16.03■□□□□ 0.16
CCDC7-201ENST00000277657 TMEM70Q9BUB7 260 aa16.03■□□□□ 0.16
CCDC7-201ENST00000277657 MCRIP2Q9BUT9 160 aaKnown RBP16.03■□□□□ 0.16
CCDC7-201ENST00000277657 RPL35AP18077 110 aaKnown RBP16.02■□□□□ 0.16
CCDC7-201ENST00000277657 SUMO4Q6EEV6 95 aa16.02■□□□□ 0.16
CCDC7-201ENST00000277657 TEX43Q6ZNM6 134 aa16.02■□□□□ 0.16
CCDC7-201ENST00000277657 SPXQ9BT56 116 aa16.02■□□□□ 0.16
CCDC7-201ENST00000277657 HBDP02042 147 aa16.01■□□□□ 0.15
CCDC7-201ENST00000277657 SUMO2P61956 95 aaKnown RBP16.01■□□□□ 0.15
CCDC7-201ENST00000277657 GTSCR1Q86UQ5 136 aa16.01■□□□□ 0.15
CCDC7-201ENST00000277657 ZNF747Q9BV97 191 aa16.01■□□□□ 0.15
CCDC7-201ENST00000277657 SMIM2Q9BVW6 85 aa16.01■□□□□ 0.15
CCDC7-201ENST00000277657 TRRAPQ9Y4A5 3859 aa16.01■□□□□ 0.15
CCDC7-201ENST00000277657 NOTCH3Q9UM47 2321 aa16.01■□□□□ 0.15
CCDC7-201ENST00000277657 AZU1P20160 251 aa16.01■□□□□ 0.15
CCDC7-201ENST00000277657 C1QTNF4Q9BXJ3 329 aa16.01■□□□□ 0.15
CCDC7-201ENST00000277657 FAM74A4Q5TZK3 123 aa16■□□□□ 0.15
CCDC7-201ENST00000277657 SYS1-DBNDD2H3BUS1 97 aa15.99■□□□□ 0.15
CCDC7-201ENST00000277657 CSNK1G2-AS1Q8NCQ2 148 aa15.99■□□□□ 0.15
CCDC7-201ENST00000277657 IL17DQ8TAD2 202 aa15.99■□□□□ 0.15
CCDC7-201ENST00000277657 IGHV3OR16-12A0A075B7B8 117 aa15.99■□□□□ 0.15
CCDC7-201ENST00000277657 F5H697 171 aa15.99■□□□□ 0.15
CCDC7-201ENST00000277657 RNASE8Q8TDE3 154 aaKnown RBP15.99■□□□□ 0.15
CCDC7-201ENST00000277657 GOLT1BQ9Y3E0 138 aa15.99■□□□□ 0.15
CCDC7-201ENST00000277657 FBN1P35555 2871 aaKnown RBP15.99■□□□□ 0.15
CCDC7-201ENST00000277657 WIPF1O43516 503 aa15.98■□□□□ 0.15
CCDC7-201ENST00000277657 FCER1GP30273 86 aa15.98■□□□□ 0.15
CCDC7-201ENST00000277657 ZNF664Q8N3J9 261 aa15.98■□□□□ 0.15
CCDC7-201ENST00000277657 MAP1LC3CQ9BXW4 147 aa15.98■□□□□ 0.15
CCDC7-201ENST00000277657 A8MWV9 139 aa15.97■□□□□ 0.15
CCDC7-201ENST00000277657 RPL32P62910 135 aaKnown RBP15.97■□□□□ 0.15
CCDC7-201ENST00000277657 SPATA12Q7Z6I5 190 aa15.97■□□□□ 0.15
CCDC7-201ENST00000277657 M0QY20 66 aa15.97■□□□□ 0.15
CCDC7-201ENST00000277657 LAGE3Q14657 143 aa15.97■□□□□ 0.15
CCDC7-201ENST00000277657 ZNF56Q15929 161 aa15.97■□□□□ 0.15
CCDC7-201ENST00000277657 UFSP1Q6NVU6 142 aa15.97■□□□□ 0.15
CCDC7-201ENST00000277657 PRIMA1Q86XR5 153 aa15.97■□□□□ 0.15
CCDC7-201ENST00000277657 NDUFAF3Q9BU61 184 aa15.97■□□□□ 0.15
CCDC7-201ENST00000277657 PKIAP61925 76 aa15.96■□□□□ 0.15
CCDC7-201ENST00000277657 TMEM263Q8WUH6 116 aaKnown RBP15.96■□□□□ 0.15
CCDC7-201ENST00000277657 TRBV6-5A0A0K0K1A5 114 aa15.95■□□□□ 0.14
CCDC7-201ENST00000277657 K7EMI3 77 aa15.95■□□□□ 0.14
CCDC7-201ENST00000277657 IGLL1P15814 213 aa15.95■□□□□ 0.14
CCDC7-201ENST00000277657 PET117Q6UWS5 81 aa15.95■□□□□ 0.14
CCDC7-201ENST00000277657 TCAPO15273 167 aa15.95■□□□□ 0.14
CCDC7-201ENST00000277657 ZNF705AQ6ZN79 300 aaPredicted RBP15.95■□□□□ 0.14
CCDC7-201ENST00000277657 EDA2RQ9HAV5 297 aa15.95■□□□□ 0.14
CCDC7-201ENST00000277657 ST20Q9HBF5 79 aa15.95■□□□□ 0.14
CCDC7-201ENST00000277657 POLR2KP53803 58 aaKnown RBP15.94■□□□□ 0.14
CCDC7-201ENST00000277657 TMEM158Q8WZ71 300 aa15.94■□□□□ 0.14
CCDC7-201ENST00000277657 CFAP126Q5VTH2 177 aa15.93■□□□□ 0.14
CCDC7-201ENST00000277657 CSTL1Q9H114 145 aa15.93■□□□□ 0.14
CCDC7-201ENST00000277657 MRPL16Q9NX20 251 aaKnown RBP15.93■□□□□ 0.14
CCDC7-201ENST00000277657 NACAE9PAV3 2078 aa15.93■□□□□ 0.14
CCDC7-201ENST00000277657 PRO1933Q9H354 126 aa15.93■□□□□ 0.14
CCDC7-201ENST00000277657 TSTD3H0UI37 97 aa15.92■□□□□ 0.14
CCDC7-201ENST00000277657 ORMDL2Q53FV1 153 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 VAMP8Q9BV40 100 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 KIR2DL5BA0A0G2JN68 375 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 KIR2DL5BA0A0G2JPC4 375 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 C20orf202A1L168 122 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 RS1O15537 224 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 KIR2DL5AQ8N109 375 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 C3orf56Q8N813 242 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 IFI27L1Q96BM0 104 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 C16orf74Q96GX8 76 aa15.91■□□□□ 0.14
CCDC7-201ENST00000277657 LINC01545Q5VT33 79 aa15.9■□□□□ 0.14
CCDC7-201ENST00000277657 TRBV27A0A0K0K1C4 114 aa15.89■□□□□ 0.13
CCDC7-201ENST00000277657 PLAC8L1A1L4L8 177 aa15.89■□□□□ 0.13
CCDC7-201ENST00000277657 SDHAF1A6NFY7 115 aa15.89■□□□□ 0.13
CCDC7-201ENST00000277657 RHODO00212 210 aa15.89■□□□□ 0.13
CCDC7-201ENST00000277657 VCYO14598 125 aa15.89■□□□□ 0.13
CCDC7-201ENST00000277657 DAZ2Q13117 558 aaKnown RBP15.89■□□□□ 0.13
CCDC7-201ENST00000277657 SHISA2Q6UWI4 295 aa15.89■□□□□ 0.13
CCDC7-201ENST00000277657 H7C1H1 209 aa15.88■□□□□ 0.13
CCDC7-201ENST00000277657 IGHV3-73A0A0B4J1V6 119 aa15.88■□□□□ 0.13
CCDC7-201ENST00000277657 NUDT3O95989 172 aa15.88■□□□□ 0.13
CCDC7-201ENST00000277657 LGALS9BQ3B8N2 356 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms