RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 INSP01308 110 aa17.82■□□□□ 0.44
SSBP4-201ENST00000270061 CKS2P33552 79 aa17.82■□□□□ 0.44
SSBP4-201ENST00000270061 APOC4P55056 127 aa17.82■□□□□ 0.44
SSBP4-201ENST00000270061 NUTF2P61970 127 aaKnown RBP17.81■□□□□ 0.44
SSBP4-201ENST00000270061 CHCHD1Q96BP2 118 aaKnown RBP17.81■□□□□ 0.44
SSBP4-201ENST00000270061 URB1-AS1Q96HZ7 61 aa17.81■□□□□ 0.44
SSBP4-201ENST00000270061 MDFICQ9P1T7 246 aa17.81■□□□□ 0.44
SSBP4-201ENST00000270061 LAMTOR2Q9Y2Q5 125 aa17.81■□□□□ 0.44
SSBP4-201ENST00000270061 CASC10Q5T4H9 136 aa17.81■□□□□ 0.44
SSBP4-201ENST00000270061 SPRY2O43597 315 aa17.79■□□□□ 0.44
SSBP4-201ENST00000270061 SAMD10Q9BYL1 202 aa17.79■□□□□ 0.44
SSBP4-201ENST00000270061 CBY3A6NI87 242 aa17.79■□□□□ 0.44
SSBP4-201ENST00000270061 LINC00614P0C842 121 aa17.79■□□□□ 0.44
SSBP4-201ENST00000270061 RPL35AP18077 110 aaKnown RBP17.79■□□□□ 0.44
SSBP4-201ENST00000270061 AP1S3Q96PC3 154 aa17.79■□□□□ 0.44
SSBP4-201ENST00000270061 DPH3P1Q9H4G8 78 aa17.79■□□□□ 0.44
SSBP4-201ENST00000270061 MUC4Q99102 2169 aa17.78■□□□□ 0.44
SSBP4-201ENST00000270061 KIR2DL5BA0A0G2JN68 375 aa17.78■□□□□ 0.44
SSBP4-201ENST00000270061 KIR2DL5BA0A0G2JPC4 375 aa17.78■□□□□ 0.44
SSBP4-201ENST00000270061 KIR2DL5AQ8N109 375 aa17.78■□□□□ 0.44
SSBP4-201ENST00000270061 KIR2DL5BQ8NHK3 375 aa17.78■□□□□ 0.44
SSBP4-201ENST00000270061 OVOL2Q9BRP0 275 aa17.78■□□□□ 0.44
SSBP4-201ENST00000270061 HSBP1O75506 76 aa17.77■□□□□ 0.44
SSBP4-201ENST00000270061 RNASEKQ6P5S7 137 aaKnown RBP17.77■□□□□ 0.44
SSBP4-201ENST00000270061 Q6ZWC4 215 aa17.77■□□□□ 0.44
SSBP4-201ENST00000270061 STARD9Q9P2P6 4700 aa17.77■□□□□ 0.43
SSBP4-201ENST00000270061 TENM2Q9NT68 2774 aa17.77■□□□□ 0.43
SSBP4-201ENST00000270061 AMTP48728 403 aa17.76■□□□□ 0.43
SSBP4-201ENST00000270061 SYT8Q8NBV8 401 aa17.76■□□□□ 0.43
SSBP4-201ENST00000270061 MRAP2Q96G30 205 aa17.76■□□□□ 0.43
SSBP4-201ENST00000270061 SMKR1H3BMG3 65 aa17.76■□□□□ 0.43
SSBP4-201ENST00000270061 POM121L12Q8N7R1 296 aa17.76■□□□□ 0.43
SSBP4-201ENST00000270061 LINC01587Q99440 93 aa17.76■□□□□ 0.43
SSBP4-201ENST00000270061 C12orf57Q99622 126 aa17.76■□□□□ 0.43
SSBP4-201ENST00000270061 XCL2Q9UBD3 114 aa17.76■□□□□ 0.43
SSBP4-201ENST00000270061 NPYP01303 97 aa17.75■□□□□ 0.43
SSBP4-201ENST00000270061 DEFB135Q30KP9 77 aa17.75■□□□□ 0.43
SSBP4-201ENST00000270061 PYY3Q5JQD4 70 aa17.75■□□□□ 0.43
SSBP4-201ENST00000270061 C14orf178Q8N769 122 aaPredicted RBP17.75■□□□□ 0.43
SSBP4-201ENST00000270061 NCR2O95944 276 aa17.74■□□□□ 0.43
SSBP4-201ENST00000270061 ZFAND6Q6FIF0 208 aa17.74■□□□□ 0.43
SSBP4-201ENST00000270061 MORN3Q6PF18 240 aaPredicted RBP17.74■□□□□ 0.43
SSBP4-201ENST00000270061 TP53TG1Q9Y2A0 90 aa17.74■□□□□ 0.43
SSBP4-201ENST00000270061 KIF25-AS1Q9Y6Z4 181 aa17.74■□□□□ 0.43
SSBP4-201ENST00000270061 PMCHP20382 165 aa17.74■□□□□ 0.43
SSBP4-201ENST00000270061 GSN-AS1Q9NRJ2 163 aa17.74■□□□□ 0.43
SSBP4-201ENST00000270061 TNFRSF6BO95407 300 aa17.73■□□□□ 0.43
SSBP4-201ENST00000270061 JOSD1Q15040 202 aaPredicted RBP17.73■□□□□ 0.43
SSBP4-201ENST00000270061 C1orf158Q8N1D5 194 aa17.73■□□□□ 0.43
SSBP4-201ENST00000270061 PRSS3P2Q8NHM4 247 aa17.73■□□□□ 0.43
SSBP4-201ENST00000270061 PTH2Q96A98 100 aa17.73■□□□□ 0.43
SSBP4-201ENST00000270061 GIG44P09565 113 aaPredicted RBP17.72■□□□□ 0.43
SSBP4-201ENST00000270061 FAM19A2Q8N3H0 131 aa17.72■□□□□ 0.43
SSBP4-201ENST00000270061 PRSS47A8MTI9 375 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 GAS8-AS1O95177 125 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 LINC00315P59091 139 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 ZNF415Q09FC8 603 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 PIK3CD-AS1Q5SR53 167 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 CSTL1Q9H114 145 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 IFI27P40305 119 aaPredicted RBP17.71■□□□□ 0.43
SSBP4-201ENST00000270061 FA2HQ7L5A8 372 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 NRACQ8N912 160 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 IL17DQ8TAD2 202 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 C1QTNF4Q9BXJ3 329 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 MAP1LC3AQ9H492 121 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 AP5S1Q9NUS5 200 aa17.71■□□□□ 0.43
SSBP4-201ENST00000270061 SMIM17P0DL12 118 aa17.7■□□□□ 0.42
SSBP4-201ENST00000270061 HTN1P15515 57 aa17.7■□□□□ 0.42
SSBP4-201ENST00000270061 RNF183Q96D59 192 aa17.7■□□□□ 0.42
SSBP4-201ENST00000270061 RYR3Q15413 4870 aa17.7■□□□□ 0.42
SSBP4-201ENST00000270061 GATA1P15976 413 aaPredicted RBP17.69■□□□□ 0.42
SSBP4-201ENST00000270061 C11orf72Q8NBR9 251 aa17.69■□□□□ 0.42
SSBP4-201ENST00000270061 LOC389332A0A1B0GUA5 103 aa17.68■□□□□ 0.42
SSBP4-201ENST00000270061 SPXQ9BT56 116 aa17.68■□□□□ 0.42
SSBP4-201ENST00000270061 TMEM208Q9BTX3 173 aa17.68■□□□□ 0.42
SSBP4-201ENST00000270061 LINC01546A6NGU7 62 aa17.68■□□□□ 0.42
SSBP4-201ENST00000270061 ZNF876PQ49A33 203 aa17.68■□□□□ 0.42
SSBP4-201ENST00000270061 JPT2Q9H910 190 aa17.68■□□□□ 0.42
SSBP4-201ENST00000270061 TRAV26-2A0A0B4J265 109 aa17.67■□□□□ 0.42
SSBP4-201ENST00000270061 IGHV1-24A0A0C4DH33 117 aa17.67■□□□□ 0.42
SSBP4-201ENST00000270061 M0R2P5 195 aa17.67■□□□□ 0.42
SSBP4-201ENST00000270061 NXT2Q9NPJ8 142 aaKnown RBP17.67■□□□□ 0.42
SSBP4-201ENST00000270061 DYNC2H1Q8NCM8 4307 aaKnown RBP17.67■□□□□ 0.42
SSBP4-201ENST00000270061 PRM2P04554 102 aa17.66■□□□□ 0.42
SSBP4-201ENST00000270061 GOLT1BQ9Y3E0 138 aa17.66■□□□□ 0.42
SSBP4-201ENST00000270061 LYSTQ99698 3801 aa17.66■□□□□ 0.42
SSBP4-201ENST00000270061 PPP1R17O96001 155 aa17.66■□□□□ 0.42
SSBP4-201ENST00000270061 MGPP08493 103 aa17.66■□□□□ 0.42
SSBP4-201ENST00000270061 CSNK1G2-AS1Q8NCQ2 148 aa17.66■□□□□ 0.42
SSBP4-201ENST00000270061 CRYGDP07320 174 aa17.65■□□□□ 0.42
SSBP4-201ENST00000270061 RASL10AQ92737 203 aa17.64■□□□□ 0.41
SSBP4-201ENST00000270061 IGLV2-18A0A075B6J9 118 aa17.63■□□□□ 0.41
SSBP4-201ENST00000270061 A0A0J9YWU9 116 aa17.63■□□□□ 0.41
SSBP4-201ENST00000270061 Q8N8P6 123 aa17.63■□□□□ 0.41
SSBP4-201ENST00000270061 C20orf78Q9BR46 151 aa17.63■□□□□ 0.41
SSBP4-201ENST00000270061 NDUFAF3Q9BU61 184 aa17.63■□□□□ 0.41
SSBP4-201ENST00000270061 PMCHL1Q16048 86 aa17.63■□□□□ 0.41
SSBP4-201ENST00000270061 NIT2Q9NQR4 276 aa17.63■□□□□ 0.41
SSBP4-201ENST00000270061 A0A087WWL8 130 aa17.62■□□□□ 0.41
SSBP4-201ENST00000270061 AZU1P20160 251 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms