RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 C17orf58Q2M2W7 97 aa8.94□□□□□ -0.98
PTPN4-201ENST00000263708 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
PTPN4-201ENST00000263708 KLK12Q9UKR0 248 aa8.93□□□□□ -0.98
PTPN4-201ENST00000263708 TET2Q6N021 2002 aaPredicted RBP8.93□□□□□ -0.98
PTPN4-201ENST00000263708 C20orf144Q9BQM9 153 aa8.93□□□□□ -0.98
PTPN4-201ENST00000263708 IGKV2D-26A0A0A0MRZ7 120 aa8.93□□□□□ -0.98
PTPN4-201ENST00000263708 C11orf52Q96A22 123 aa8.93□□□□□ -0.98
PTPN4-201ENST00000263708 EML5Q05BV3 1969 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 DSCAMO60469 2012 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 RBAKDNA6NC62 111 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 CRYGBP07316 175 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 FOXI1Q12951 378 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 FXYD5Q96DB9 178 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 KIAA1671Q9BY89 1806 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 MRPL55Q7Z7F7 128 aaKnown RBP8.92□□□□□ -0.98
PTPN4-201ENST00000263708 PRR14LQ5THK1 2151 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 WFDC10BQ8IUB3 73 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 PCP2Q8IVA1 136 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 SIVA1O15304 175 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 Q8TCH9 128 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 UBE2D4Q9Y2X8 147 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 WI2-2373I1.2A0A1W2PRP0 233 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 SPAG11BQ08648 103 aa8.92□□□□□ -0.98
PTPN4-201ENST00000263708 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 KIR2DL5BQ8NHK3 375 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 TRBV7-3A0A075B6L6 115 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 LECT2O14960 151 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 UBE2D1P51668 147 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 B3GALT5-AS1P59052 145 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 DIAPH2-AS1Q14236 149 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 KIR2DL5BA0A0G2JN68 375 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 KIR2DL5BA0A0G2JPC4 375 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 KIR2DL5AQ8N109 375 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 RNF152Q8N8N0 203 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 LGALS9O00182 355 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 UPK3BQ9BT76 320 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 FGF23Q9GZV9 251 aaPredicted RBP8.91□□□□□ -0.98
PTPN4-201ENST00000263708 SPG11Q96JI7 2443 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 H3BUA1 57 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 A0A087WZ39 114 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 C14orf177Q52M58 125 aa8.91□□□□□ -0.98
PTPN4-201ENST00000263708 KIAA1549LQ6ZVL6 1849 aa8.9□□□□□ -0.98
PTPN4-201ENST00000263708 WT1-ASQ06250 92 aa8.9□□□□□ -0.98
PTPN4-201ENST00000263708 DEFB113Q30KQ7 82 aa8.9□□□□□ -0.98
PTPN4-201ENST00000263708 LINC01545Q5VT33 79 aa8.9□□□□□ -0.98
PTPN4-201ENST00000263708 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
PTPN4-201ENST00000263708 LYL1P12980 280 aa8.9□□□□□ -0.98
PTPN4-201ENST00000263708 LOXP28300 417 aaPredicted RBP8.9□□□□□ -0.98
PTPN4-201ENST00000263708 CLEC2BQ92478 149 aa8.9□□□□□ -0.98
PTPN4-201ENST00000263708 TRAV23DV6A0A075B6W5 121 aa8.89□□□□□ -0.99
PTPN4-201ENST00000263708 GATA1P15976 413 aaPredicted RBP8.89□□□□□ -0.99
PTPN4-201ENST00000263708 QRFPP83859 136 aa8.89□□□□□ -0.99
PTPN4-201ENST00000263708 Q6ZS49 121 aa8.89□□□□□ -0.99
PTPN4-201ENST00000263708 IGHV2-5P01817 119 aa8.89□□□□□ -0.99
PTPN4-201ENST00000263708 COX7BP24311 80 aa8.89□□□□□ -0.99
PTPN4-201ENST00000263708 SMAD5-AS1Q9Y6J3 95 aa8.89□□□□□ -0.99
PTPN4-201ENST00000263708 PRSS33Q8NF86 280 aa8.89□□□□□ -0.99
PTPN4-201ENST00000263708 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
PTPN4-201ENST00000263708 LYPD6Q86Y78 171 aa8.89□□□□□ -0.99
PTPN4-201ENST00000263708 IL17DQ8TAD2 202 aa8.88□□□□□ -0.99
PTPN4-201ENST00000263708 TEX49A0A1B0GTD5 131 aa8.88□□□□□ -0.99
PTPN4-201ENST00000263708 JMJD7-PLA2G4BH0Y9G9 81 aa8.88□□□□□ -0.99
PTPN4-201ENST00000263708 A4D1N5 150 aa8.88□□□□□ -0.99
PTPN4-201ENST00000263708 IGKV1-17P01599 117 aa8.88□□□□□ -0.99
PTPN4-201ENST00000263708 LYPD6BQ8NI32 183 aa8.88□□□□□ -0.99
PTPN4-201ENST00000263708 K7EM74 188 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 BPY2O14599 106 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 IGHV4-38-2P0DP08 117 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 FAM231DQ6ZW35 169 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 CEP192Q8TEP8 1941 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 IGLC1P0CG04 106 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 ADCYAP1P18509 176 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 HRCT1Q6UXD1 115 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 Q8NFD4 153 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 CREBBPQ92793 2442 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 IL15RAQ13261 267 aa8.87□□□□□ -0.99
PTPN4-201ENST00000263708 CXCL5P42830 114 aa8.86□□□□□ -0.99
PTPN4-201ENST00000263708 RPL39P62891 51 aaKnown RBP8.86□□□□□ -0.99
PTPN4-201ENST00000263708 IGHV4-30-2A0A087WSY4 118 aa8.86□□□□□ -0.99
PTPN4-201ENST00000263708 UBE2D3P61077 147 aa8.86□□□□□ -0.99
PTPN4-201ENST00000263708 IGHV4-30-4P0DP06 118 aa8.86□□□□□ -0.99
PTPN4-201ENST00000263708 IGHV4-31P0DP07 118 aa8.86□□□□□ -0.99
PTPN4-201ENST00000263708 IGKV1D-37A0A075B6S9 117 aa8.86□□□□□ -0.99
PTPN4-201ENST00000263708 FAM19A1Q7Z5A9 133 aa8.86□□□□□ -0.99
PTPN4-201ENST00000263708 C11orf45Q8TAV5 145 aa8.86□□□□□ -0.99
PTPN4-201ENST00000263708 DENND4CQ5VZ89 1909 aa8.85□□□□□ -0.99
PTPN4-201ENST00000263708 AGPAT4-IT1Q9H0P7 198 aa8.85□□□□□ -0.99
PTPN4-201ENST00000263708 NCOR1P1Q9H4R4 102 aa8.85□□□□□ -0.99
PTPN4-201ENST00000263708 WISP1O95388 367 aa8.85□□□□□ -0.99
PTPN4-201ENST00000263708 ZNF491Q8N8L2 437 aa8.85□□□□□ -0.99
PTPN4-201ENST00000263708 ZFP36P26651 326 aaKnown RBP8.85□□□□□ -0.99
PTPN4-201ENST00000263708 SERP1Q9Y6X1 66 aa8.85□□□□□ -0.99
PTPN4-201ENST00000263708 PLXNA4Q9HCM2 1894 aa8.85□□□□□ -0.99
PTPN4-201ENST00000263708 Q8N1Y9 231 aa8.85□□□□□ -0.99
PTPN4-201ENST00000263708 MIR7-3HGQ8N6C7 128 aa8.84□□□□□ -0.99
PTPN4-201ENST00000263708 A0A0J9YXV3 536 aa8.84□□□□□ -0.99
PTPN4-201ENST00000263708 K7EN84 100 aa8.84□□□□□ -0.99
PTPN4-201ENST00000263708 Q6ZVH6 145 aa8.84□□□□□ -0.99
PTPN4-201ENST00000263708 PTPN13Q12923 2485 aa8.84□□□□□ -0.99
PTPN4-201ENST00000263708 LINC00311Q8N616 119 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms