RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 RRN3P1Q2M238 152 aa9.41□□□□□ -0.9
VAMP7-201ENST00000262640 NDUFAF3Q9BU61 184 aa9.41□□□□□ -0.9
VAMP7-201ENST00000262640 CMYA5Q8N3K9 4069 aa9.4□□□□□ -0.9
VAMP7-201ENST00000262640 NPYP01303 97 aa9.4□□□□□ -0.9
VAMP7-201ENST00000262640 IGHV4-30-4P0DP06 118 aa9.4□□□□□ -0.9
VAMP7-201ENST00000262640 LINC00315P59091 139 aa9.4□□□□□ -0.9
VAMP7-201ENST00000262640 A0A087WWL8 130 aa9.4□□□□□ -0.91
VAMP7-201ENST00000262640 NIT1Q86X76 327 aa9.4□□□□□ -0.91
VAMP7-201ENST00000262640 TMEM18Q96B42 140 aa9.4□□□□□ -0.91
VAMP7-201ENST00000262640 HIST1H2BLQ99880 126 aa9.4□□□□□ -0.91
VAMP7-201ENST00000262640 TRAV26-2A0A0B4J265 109 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 A8MWV9 139 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 TNFRSF6BO95407 300 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 CRYGDP07320 174 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 AKR1D1P51857 326 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 SAMD5Q5TGI4 173 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 RNASEKQ6P5S7 137 aaKnown RBP9.39□□□□□ -0.91
VAMP7-201ENST00000262640 CHCHD1Q96BP2 118 aaKnown RBP9.39□□□□□ -0.91
VAMP7-201ENST00000262640 G3V4G9 280 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 GAS8-AS1O95177 125 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 FABP4P15090 132 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 RASL10AQ92737 203 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 MAP1LC3AQ9H492 121 aa9.39□□□□□ -0.91
VAMP7-201ENST00000262640 GATA1P15976 413 aaPredicted RBP9.38□□□□□ -0.91
VAMP7-201ENST00000262640 DAZ2Q13117 558 aaKnown RBP9.38□□□□□ -0.91
VAMP7-201ENST00000262640 FAM74A4Q5TZK3 123 aa9.38□□□□□ -0.91
VAMP7-201ENST00000262640 NRACQ8N912 160 aa9.38□□□□□ -0.91
VAMP7-201ENST00000262640 PRSS3P2Q8NHM4 247 aa9.38□□□□□ -0.91
VAMP7-201ENST00000262640 URB1-AS1Q96HZ7 61 aa9.38□□□□□ -0.91
VAMP7-201ENST00000262640 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
VAMP7-201ENST00000262640 MRPL16Q9NX20 251 aaKnown RBP9.38□□□□□ -0.91
VAMP7-201ENST00000262640 HSBP1O75506 76 aa9.38□□□□□ -0.91
VAMP7-201ENST00000262640 PPP1R17O96001 155 aa9.38□□□□□ -0.91
VAMP7-201ENST00000262640 LINC00614P0C842 121 aa9.38□□□□□ -0.91
VAMP7-201ENST00000262640 LOC389332A0A1B0GUA5 103 aa9.37□□□□□ -0.91
VAMP7-201ENST00000262640 SMIM9A6NGZ8 99 aa9.37□□□□□ -0.91
VAMP7-201ENST00000262640 A8MZ25 164 aa9.37□□□□□ -0.91
VAMP7-201ENST00000262640 F5H697 171 aa9.37□□□□□ -0.91
VAMP7-201ENST00000262640 LGALS9BQ3B8N2 356 aa9.37□□□□□ -0.91
VAMP7-201ENST00000262640 FA2HQ7L5A8 372 aa9.37□□□□□ -0.91
VAMP7-201ENST00000262640 PACRGQ96M98 296 aaPredicted RBP9.37□□□□□ -0.91
VAMP7-201ENST00000262640 PLAC8L1A1L4L8 177 aa9.37□□□□□ -0.91
VAMP7-201ENST00000262640 ZNF56Q15929 161 aa9.37□□□□□ -0.91
VAMP7-201ENST00000262640 SUMO4Q6EEV6 95 aa9.37□□□□□ -0.91
VAMP7-201ENST00000262640 TRGV1A0A0A0MS02 117 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 PRSS47A8MTI9 375 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 RHODO00212 210 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 IFI27P40305 119 aaPredicted RBP9.36□□□□□ -0.91
VAMP7-201ENST00000262640 RS1O15537 224 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 PMCHP20382 165 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 AMTP48728 403 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 CFAP126Q5VTH2 177 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 OR10D4PQ8NGN7 298 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 OVOL2Q9BRP0 275 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 NOP10Q9NPE3 64 aaKnown RBP9.36□□□□□ -0.91
VAMP7-201ENST00000262640 NXT2Q9NPJ8 142 aaKnown RBP9.36□□□□□ -0.91
VAMP7-201ENST00000262640 AP5S1Q9NUS5 200 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 X6R8D5 127 aa9.36□□□□□ -0.91
VAMP7-201ENST00000262640 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
VAMP7-201ENST00000262640 UFSP1Q6NVU6 142 aa9.35□□□□□ -0.91
VAMP7-201ENST00000262640 LURAP1LQ8IV03 231 aa9.35□□□□□ -0.91
VAMP7-201ENST00000262640 C20orf78Q9BR46 151 aa9.35□□□□□ -0.91
VAMP7-201ENST00000262640 Q6ZWC4 215 aa9.34□□□□□ -0.91
VAMP7-201ENST00000262640 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
VAMP7-201ENST00000262640 Q6ZTI0 123 aa9.34□□□□□ -0.91
VAMP7-201ENST00000262640 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
VAMP7-201ENST00000262640 ZFP2Q6ZN57 461 aa9.33□□□□□ -0.92
VAMP7-201ENST00000262640 FAM19A2Q8N3H0 131 aa9.33□□□□□ -0.92
VAMP7-201ENST00000262640 Q8N8P6 123 aa9.33□□□□□ -0.92
VAMP7-201ENST00000262640 EDA2RQ9HAV5 297 aa9.33□□□□□ -0.92
VAMP7-201ENST00000262640 LINC01546A6NGU7 62 aa9.33□□□□□ -0.92
VAMP7-201ENST00000262640 H7C1H1 209 aa9.33□□□□□ -0.92
VAMP7-201ENST00000262640 M0QY20 66 aa9.33□□□□□ -0.92
VAMP7-201ENST00000262640 RNF183Q96D59 192 aa9.33□□□□□ -0.92
VAMP7-201ENST00000262640 OR4C5Q8NGB2 326 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 OR11H2Q8NH07 326 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 SMIM2Q9BVW6 85 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 PKD1L1Q8TDX9 2849 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 IGLV2-18A0A075B6J9 118 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 IGHV3-73A0A0B4J1V6 119 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 TRAV4A0A0B4J268 109 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 IGHV1-24A0A0C4DH33 117 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 ST20Q9HBF5 79 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 DNAH3Q8TD57 4116 aa9.32□□□□□ -0.92
VAMP7-201ENST00000262640 TRBV6-5A0A0K0K1A5 114 aa9.31□□□□□ -0.92
VAMP7-201ENST00000262640 RPL32P62910 135 aaKnown RBP9.31□□□□□ -0.92
VAMP7-201ENST00000262640 NIT2Q9NQR4 276 aa9.31□□□□□ -0.92
VAMP7-201ENST00000262640 GAGE12BA1L429 117 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 GAGE7O76087 117 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 GAGE12FP0CL80 117 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 GAGE12GP0CL81 117 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 GAGE12IP0CL82 117 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 MIFP14174 115 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 EMP1P54849 157 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 RIPPLY3P57055 190 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 PMCHL1Q16048 86 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 TRGV2A0A075B6R0 118 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 CIDEAO60543 219 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 IGHV3-53P01767 116 aa9.3□□□□□ -0.92
VAMP7-201ENST00000262640 KPRPQ5T749 579 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms