RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.77■□□□□ 0.28
RAB11FIP3-201ENST00000262305 IGKV2-29A2NJV5 120 aaPredicted RBP16.77■□□□□ 0.28
RAB11FIP3-201ENST00000262305 CRYGBP07316 175 aa16.77■□□□□ 0.28
RAB11FIP3-201ENST00000262305 LINC01548A6NM66 108 aa16.77■□□□□ 0.27
RAB11FIP3-201ENST00000262305 C16orf74Q96GX8 76 aa16.76■□□□□ 0.27
RAB11FIP3-201ENST00000262305 FRMD6-AS1P0C7T7 363 aa16.76■□□□□ 0.27
RAB11FIP3-201ENST00000262305 EBI3Q14213 229 aa16.76■□□□□ 0.27
RAB11FIP3-201ENST00000262305 ZFP2Q6ZN57 461 aa16.76■□□□□ 0.27
RAB11FIP3-201ENST00000262305 PCP2Q8IVA1 136 aa16.76■□□□□ 0.27
RAB11FIP3-201ENST00000262305 DEFB1P60022 68 aa16.76■□□□□ 0.27
RAB11FIP3-201ENST00000262305 C11orf71Q6IPW1 123 aa16.75■□□□□ 0.27
RAB11FIP3-201ENST00000262305 IGF1P05019 195 aa16.75■□□□□ 0.27
RAB11FIP3-201ENST00000262305 HIVEP3Q5T1R4 2406 aa16.75■□□□□ 0.27
RAB11FIP3-201ENST00000262305 LY6LH3BQJ8 138 aa16.75■□□□□ 0.27
RAB11FIP3-201ENST00000262305 FGF6P10767 208 aa16.75■□□□□ 0.27
RAB11FIP3-201ENST00000262305 C4orf3Q8WVX3 66 aa16.75■□□□□ 0.27
RAB11FIP3-201ENST00000262305 IGHG4P01861 327 aa16.74■□□□□ 0.27
RAB11FIP3-201ENST00000262305 ANAPC13Q9BS18 74 aa16.74■□□□□ 0.27
RAB11FIP3-201ENST00000262305 PLA2G5P39877 138 aa16.74■□□□□ 0.27
RAB11FIP3-201ENST00000262305 NXPH4O95158 308 aa16.74■□□□□ 0.27
RAB11FIP3-201ENST00000262305 MYCNOSP40205 109 aa16.74■□□□□ 0.27
RAB11FIP3-201ENST00000262305 TMEM61Q8N0U2 210 aa16.73■□□□□ 0.27
RAB11FIP3-201ENST00000262305 LRRC75A-AS1Q8N1F1 130 aa16.73■□□□□ 0.27
RAB11FIP3-201ENST00000262305 IGLV2-8P01709 118 aa16.73■□□□□ 0.27
RAB11FIP3-201ENST00000262305 BOD1L2Q8IYS8 172 aa16.73■□□□□ 0.27
RAB11FIP3-201ENST00000262305 A0A0J9YX75 114 aa16.73■□□□□ 0.27
RAB11FIP3-201ENST00000262305 K7EP34 96 aa16.73■□□□□ 0.27
RAB11FIP3-201ENST00000262305 A0A1W2PPM0 123 aa16.72■□□□□ 0.27
RAB11FIP3-201ENST00000262305 PLXNB1O43157 2135 aa16.72■□□□□ 0.27
RAB11FIP3-201ENST00000262305 OCIAD2Q56VL3 154 aa16.72■□□□□ 0.27
RAB11FIP3-201ENST00000262305 A0A0J9YY99 117 aa16.72■□□□□ 0.27
RAB11FIP3-201ENST00000262305 MYO9AB2RTY4 2548 aa16.72■□□□□ 0.27
RAB11FIP3-201ENST00000262305 ZFAND6Q6FIF0 208 aa16.72■□□□□ 0.27
RAB11FIP3-201ENST00000262305 ANKRD39Q53RE8 183 aa16.71■□□□□ 0.27
RAB11FIP3-201ENST00000262305 PIFOQ8TCI5 191 aa16.71■□□□□ 0.27
RAB11FIP3-201ENST00000262305 NACAE9PAV3 2078 aa16.7■□□□□ 0.26
RAB11FIP3-201ENST00000262305 ETDBQ3ZM63 59 aa16.7■□□□□ 0.26
RAB11FIP3-201ENST00000262305 LRP4O75096 1905 aa16.7■□□□□ 0.26
RAB11FIP3-201ENST00000262305 C12orf74Q32Q52 190 aa16.7■□□□□ 0.26
RAB11FIP3-201ENST00000262305 K7EQD1 137 aa16.7■□□□□ 0.26
RAB11FIP3-201ENST00000262305 CLPSL1A2RUU4 121 aa16.7■□□□□ 0.26
RAB11FIP3-201ENST00000262305 F8W1H4 67 aa16.69■□□□□ 0.26
RAB11FIP3-201ENST00000262305 K7ERJ3 54 aa16.69■□□□□ 0.26
RAB11FIP3-201ENST00000262305 NPSP0C0P6 89 aa16.69■□□□□ 0.26
RAB11FIP3-201ENST00000262305 TDRG1Q3Y452 100 aa16.69■□□□□ 0.26
RAB11FIP3-201ENST00000262305 MLST8Q9BVC4 326 aa16.69■□□□□ 0.26
RAB11FIP3-201ENST00000262305 CLPSL2Q6UWE3 100 aa16.69■□□□□ 0.26
RAB11FIP3-201ENST00000262305 A0A1B0GXF2 115 aa16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 DAZ2Q13117 558 aaKnown RBP16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 LINC00322Q6ZN03 302 aaPredicted RBP16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 DAZ4Q86SG3 579 aaKnown RBP16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 CITED2Q99967 270 aaPredicted RBP16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 GTSF1LQ9H1H1 148 aa16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 DAZ3Q9NR90 486 aaKnown RBP16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 A0A0J9YXV3 536 aa16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 INAFM2P0DMQ5 153 aa16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 TRAV13-2A0A0B4J235 113 aa16.68■□□□□ 0.26
RAB11FIP3-201ENST00000262305 TNRC6AQ8NDV7 1962 aaKnown RBP16.67■□□□□ 0.26
RAB11FIP3-201ENST00000262305 Q9H8V8 135 aa16.67■□□□□ 0.26
RAB11FIP3-201ENST00000262305 F8WEM9 126 aa16.67■□□□□ 0.26
RAB11FIP3-201ENST00000262305 H3BMM0 161 aa16.67■□□□□ 0.26
RAB11FIP3-201ENST00000262305 XCL1P47992 114 aa16.67■□□□□ 0.26
RAB11FIP3-201ENST00000262305 UBE2WQ96B02 151 aa16.67■□□□□ 0.26
RAB11FIP3-201ENST00000262305 RMI2Q96E14 147 aa16.67■□□□□ 0.26
RAB11FIP3-201ENST00000262305 K7EP13 123 aa16.67■□□□□ 0.26
RAB11FIP3-201ENST00000262305 ZNF80P51504 273 aaPredicted RBP16.67■□□□□ 0.26
RAB11FIP3-201ENST00000262305 SLC25A29Q8N8R3 303 aa16.66■□□□□ 0.26
RAB11FIP3-201ENST00000262305 ATP6V0E2Q8NHE4 81 aa16.66■□□□□ 0.26
RAB11FIP3-201ENST00000262305 DNAJC9-AS1A6NH13 148 aa16.66■□□□□ 0.26
RAB11FIP3-201ENST00000262305 GAGE2AQ6NT46 116 aa16.66■□□□□ 0.26
RAB11FIP3-201ENST00000262305 ATP5G1P05496 136 aa16.66■□□□□ 0.26
RAB11FIP3-201ENST00000262305 SPART-AS1P0CW21 52 aa16.66■□□□□ 0.26
RAB11FIP3-201ENST00000262305 GYPEP15421 78 aa16.66■□□□□ 0.26
RAB11FIP3-201ENST00000262305 DEFB125Q8N687 156 aa16.66■□□□□ 0.26
RAB11FIP3-201ENST00000262305 PPDPFLQ8WWR9 84 aa16.66■□□□□ 0.26
RAB11FIP3-201ENST00000262305 TRAV12-1A0A0B4J245 112 aa16.65■□□□□ 0.26
RAB11FIP3-201ENST00000262305 ABCA2Q9BZC7 2435 aa16.65■□□□□ 0.26
RAB11FIP3-201ENST00000262305 IGHV4-31P0DP07 118 aa16.65■□□□□ 0.26
RAB11FIP3-201ENST00000262305 HIST1H4AP62805 103 aaKnown RBP16.64■□□□□ 0.25
RAB11FIP3-201ENST00000262305 Q6YL49 198 aa16.64■□□□□ 0.25
RAB11FIP3-201ENST00000262305 NKAPP1Q8N9T2 125 aa16.64■□□□□ 0.25
RAB11FIP3-201ENST00000262305 TIMM17AQ99595 171 aa16.64■□□□□ 0.25
RAB11FIP3-201ENST00000262305 TEX48A0A1B0GUV7 120 aa16.64■□□□□ 0.25
RAB11FIP3-201ENST00000262305 RPL39P62891 51 aaKnown RBP16.63■□□□□ 0.25
RAB11FIP3-201ENST00000262305 MRPL23Q16540 153 aaKnown RBP16.63■□□□□ 0.25
RAB11FIP3-201ENST00000262305 MDFICQ9P1T7 246 aa16.63■□□□□ 0.25
RAB11FIP3-201ENST00000262305 HERV-K104P63124 156 aa16.63■□□□□ 0.25
RAB11FIP3-201ENST00000262305 SCRT2Q9NQ03 307 aa16.63■□□□□ 0.25
RAB11FIP3-201ENST00000262305 TRBV7-3A0A075B6L6 115 aa16.63■□□□□ 0.25
RAB11FIP3-201ENST00000262305 PRSS47A8MTI9 375 aa16.63■□□□□ 0.25
RAB11FIP3-201ENST00000262305 H3BMG7 143 aa16.63■□□□□ 0.25
RAB11FIP3-201ENST00000262305 ZMAT4Q9H898 229 aa16.63■□□□□ 0.25
RAB11FIP3-201ENST00000262305 Q6ZQT7 251 aa16.62■□□□□ 0.25
RAB11FIP3-201ENST00000262305 TOMM6Q96B49 74 aa16.62■□□□□ 0.25
RAB11FIP3-201ENST00000262305 CFC1BP0CG36 223 aa16.62■□□□□ 0.25
RAB11FIP3-201ENST00000262305 CFC1P0CG37 223 aa16.62■□□□□ 0.25
RAB11FIP3-201ENST00000262305 C2CD3Q4AC94 2353 aa16.62■□□□□ 0.25
RAB11FIP3-201ENST00000262305 C5orf38Q86SI9 138 aa16.62■□□□□ 0.25
RAB11FIP3-201ENST00000262305 CEP295Q9C0D2 2601 aa16.62■□□□□ 0.25
RAB11FIP3-201ENST00000262305 SOCS3O14543 225 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms