RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 CTSZQ9UBR2 303 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 C2orf70A6NJV1 201 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 CD24P25063 80 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 JMJD7-PLA2G4BH0Y9G9 81 aa3.36□□□□□ -1.87
VPS13C-202ENST00000261517 TRAV8-1A0A0A6YYK1 113 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 NDPQ00604 133 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 ZNF726P1Q15940 193 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 ATP6V0E2Q8NHE4 81 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 CARD19Q96LW7 228 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 MDFICQ9P1T7 246 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 C1orf43Q9BWL3 253 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 K7EP34 96 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 C11orf1Q9H5F2 150 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 SPINK13Q1W4C9 94 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 KIR2DL5BA0A0G2JN68 375 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 KIR2DL5BA0A0G2JPC4 375 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 TEX22C9J3V5 150 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 DEFB112Q30KQ8 113 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 KIR2DL5AQ8N109 375 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 TOMM6Q96B49 74 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 SNRPCP09234 159 aaKnown RBP3.35□□□□□ -1.87
VPS13C-202ENST00000261517 IGLC3P0DOY3 106 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 MAJINQ3KP22 176 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 LINC01548A6NM66 108 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 FAM120AOSQ5T036 256 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 ZNF503Q96F45 646 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 ZNF503-AS2A6NEH8 195 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 COX7A2LO14548 114 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 TDRG1Q3Y452 100 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 C8orf49Q96NF6 230 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 GATD1Q8NB37 220 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 FAM110AQ9BQ89 295 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 FUSP35637 526 aaKnown RBP eCLIP3.35□□□□□ -1.87
VPS13C-202ENST00000261517 RUSC1-AS1Q66K80 236 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 FAM167A-AS1Q96KT0 104 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 ZNF747Q9BV97 191 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 ORMDL1Q9P0S3 153 aa3.35□□□□□ -1.87
VPS13C-202ENST00000261517 NDUFS7O75251 213 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 ADCYAP1P18509 176 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 FNDC4Q9H6D8 234 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-202ENST00000261517 PRR30Q53SZ7 412 aaPredicted RBP3.34□□□□□ -1.87
VPS13C-202ENST00000261517 GTSF1LQ9H1H1 148 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 ATP5EP2Q5VTU8 51 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 AGPAT4-IT1Q9H0P7 198 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 NDUFA7O95182 113 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 SHISA2Q6UWI4 295 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 DYNAPQ8N1N2 210 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 G3V318 75 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 NDUFA1O15239 70 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 Q6YL49 198 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 NFE4Q86UQ8 179 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 ACANP16112 2415 aa3.34□□□□□ -1.87
VPS13C-202ENST00000261517 GAGE12BA1L429 117 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 H3BT86 120 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 TIMM17BO60830 172 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 C15orf53Q8NAA6 179 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 TRAV13-1A0A0B4J241 112 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 CFHR4Q92496 578 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 TMEM126AQ9H061 195 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 NPYP01303 97 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 CRYGBP07316 175 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 GCN1Q92616 2671 aaKnown RBP3.34□□□□□ -1.88
VPS13C-202ENST00000261517 A0A087WWL8 130 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 AGRNO00468 2067 aa3.34□□□□□ -1.88
VPS13C-202ENST00000261517 MIFP14174 115 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 CRIP2P52943 208 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-202ENST00000261517 EIF4EBP1Q13541 118 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-202ENST00000261517 DEFB130BP0DP73 79 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 DEFB130AP0DP74 79 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 SEM1Q6ZVN7 128 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 XCL2Q9UBD3 114 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 ARHGAP32A7KAX9 2087 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 TMEM95Q3KNT9 176 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 LINC00479Q96M42 142 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 CHCHD7Q9BUK0 85 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 COL4A2P08572 1712 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 Q8N1Y9 231 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 A0A0J9YX75 114 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 A0A1W2PPM0 123 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 C19orf71A6NCJ1 209 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 PRO0255Q9UI72 69 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 SMAD5-AS1Q9Y6J3 95 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 TINCRA0A1B0GVN0 87 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 LY6LH3BQJ8 138 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 LINC01620Q4KN68 170 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 ODF3L1Q8IXM7 274 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 PTH2Q96A98 100 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV4-61A0A0C4DH41 118 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 GAGE12JA6NER3 117 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 GAGE4Q13068 117 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 GAGE5Q13069 117 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 Q8NA96 180 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 TRAV8-3A0A0A6YYJ7 113 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 E9PLD3 99 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 PTPRBP23467 1997 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV4-59P01825 116 aa3.33□□□□□ -1.88
VPS13C-202ENST00000261517 RSPO3Q9BXY4 272 aaPredicted RBP3.33□□□□□ -1.88
VPS13C-202ENST00000261517 IGHV3OR16-8A0A075B7F1 116 aa3.32□□□□□ -1.88
VPS13C-202ENST00000261517 TMEM213A2RRL7 107 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms