RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 FAM223BA6NKX1 122 aa14.42□□□□□ -0.1
COL4A3BP-201ENST00000261415 F8W735 103 aaPredicted RBP14.42□□□□□ -0.1
COL4A3BP-201ENST00000261415 PF4V1P10720 104 aa14.42□□□□□ -0.1
COL4A3BP-201ENST00000261415 FCER1GP30273 86 aa14.42□□□□□ -0.1
COL4A3BP-201ENST00000261415 FAM223AQ8IWN6 122 aa14.42□□□□□ -0.1
COL4A3BP-201ENST00000261415 TMEM126AQ9H061 195 aa14.42□□□□□ -0.1
COL4A3BP-201ENST00000261415 FXYD7P58549 80 aa14.41□□□□□ -0.1
COL4A3BP-201ENST00000261415 TRGV9Q99603 122 aa14.41□□□□□ -0.1
COL4A3BP-201ENST00000261415 Q9H3A6 140 aa14.41□□□□□ -0.1
COL4A3BP-201ENST00000261415 A8MWV9 139 aa14.41□□□□□ -0.1
COL4A3BP-201ENST00000261415 ID1P41134 155 aa14.41□□□□□ -0.1
COL4A3BP-201ENST00000261415 PSMB2P49721 201 aa14.41□□□□□ -0.1
COL4A3BP-201ENST00000261415 C10orf99Q6UWK7 81 aa14.41□□□□□ -0.1
COL4A3BP-201ENST00000261415 SBSPONQ8IVN8 264 aa14.41□□□□□ -0.1
COL4A3BP-201ENST00000261415 KLK15Q9H2R5 256 aa14.41□□□□□ -0.1
COL4A3BP-201ENST00000261415 LINC01546A6NGU7 62 aa14.4□□□□□ -0.1
COL4A3BP-201ENST00000261415 PSMB8P28062 276 aa14.4□□□□□ -0.1
COL4A3BP-201ENST00000261415 TRBV20-1A0A075B6N2 111 aa14.39□□□□□ -0.11
COL4A3BP-201ENST00000261415 IGKV1-17P01599 117 aa14.39□□□□□ -0.11
COL4A3BP-201ENST00000261415 EEF1AKMT3Q96AZ1 226 aa14.39□□□□□ -0.11
COL4A3BP-201ENST00000261415 CCDC140Q96MF4 163 aa14.39□□□□□ -0.11
COL4A3BP-201ENST00000261415 MAST4O15021 2626 aa14.39□□□□□ -0.11
COL4A3BP-201ENST00000261415 PRNTQ86SH4 94 aa14.39□□□□□ -0.11
COL4A3BP-201ENST00000261415 OTORQ9NRC9 128 aa14.39□□□□□ -0.11
COL4A3BP-201ENST00000261415 ANXA2RQ3ZCQ2 193 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 MRPL51Q4U2R6 128 aaKnown RBP14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 MAPKAPK5-AS1Q8N8E1 139 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 USMG5Q96IX5 58 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 NIPBLQ6KC79 2804 aaeCLIP14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 TRBV7-1A0A0A6YYK4 115 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 MYMXA0A1B0GTQ4 84 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 TMEM89A2RUT3 159 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 CKS2P33552 79 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 WFDC3Q8IUB2 231 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 AMN1Q8IY45 258 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 PTH2Q96A98 100 aa14.38□□□□□ -0.11
COL4A3BP-201ENST00000261415 TEP1Q99973 2627 aaKnown RBP14.37□□□□□ -0.11
COL4A3BP-201ENST00000261415 KIR2DL4Q99706 377 aa14.37□□□□□ -0.11
COL4A3BP-201ENST00000261415 CTSGP08311 255 aa14.36□□□□□ -0.11
COL4A3BP-201ENST00000261415 UBE2D3P61077 147 aa14.36□□□□□ -0.11
COL4A3BP-201ENST00000261415 UBE2D2P62837 147 aa14.36□□□□□ -0.11
COL4A3BP-201ENST00000261415 C5orf47Q569G3 176 aa14.36□□□□□ -0.11
COL4A3BP-201ENST00000261415 CLEC19AQ6UXS0 136 aa14.36□□□□□ -0.11
COL4A3BP-201ENST00000261415 IGLV2-11P01706 119 aa14.36□□□□□ -0.11
COL4A3BP-201ENST00000261415 TPPP3Q9BW30 176 aa14.36□□□□□ -0.11
COL4A3BP-201ENST00000261415 LOC107984156A0A0G2JMH3 177 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 GP9P14770 177 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 LEPP41159 167 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 ARL17AQ8IVW1 177 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 NXT2Q9NPJ8 142 aaKnown RBP14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 SETD2Q9BYW2 2564 aaPredicted RBP14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 ZNF785A8K8V0 405 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 M0QXV9 152 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 SCGB2A1O75556 95 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 IGHV3-11P01762 117 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 ELANEP08246 267 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 MEIG1Q5JSS6 88 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 FAM159AQ6UWV7 190 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 C16orf95Q9H693 158 aa14.35□□□□□ -0.11
COL4A3BP-201ENST00000261415 TRAV8-1A0A0A6YYK1 113 aa14.34□□□□□ -0.11
COL4A3BP-201ENST00000261415 NPYP01303 97 aa14.34□□□□□ -0.11
COL4A3BP-201ENST00000261415 ORM2P19652 201 aa14.34□□□□□ -0.11
COL4A3BP-201ENST00000261415 RNF152Q8N8N0 203 aa14.34□□□□□ -0.11
COL4A3BP-201ENST00000261415 OR10J6PQ8NGY7 276 aa14.34□□□□□ -0.11
COL4A3BP-201ENST00000261415 SLC25A39Q9BZJ4 359 aaPredicted RBP14.34□□□□□ -0.11
COL4A3BP-201ENST00000261415 C2CD3Q4AC94 2353 aa14.33□□□□□ -0.11
COL4A3BP-201ENST00000261415 SCGB1C2P0DMR2 95 aa14.33□□□□□ -0.12
COL4A3BP-201ENST00000261415 SRSF2Q01130 221 aaKnown RBP14.33□□□□□ -0.12
COL4A3BP-201ENST00000261415 GOLT1AQ6ZVE7 132 aa14.33□□□□□ -0.12
COL4A3BP-201ENST00000261415 TMEM75Q8N9X5 138 aa14.33□□□□□ -0.12
COL4A3BP-201ENST00000261415 LINC01006Q8NI28 216 aa14.33□□□□□ -0.12
COL4A3BP-201ENST00000261415 MYOZ3Q8TDC0 251 aa14.33□□□□□ -0.12
COL4A3BP-201ENST00000261415 LINC01549A6NIU2 74 aa14.32□□□□□ -0.12
COL4A3BP-201ENST00000261415 LYZL1Q6UWQ5 148 aa14.32□□□□□ -0.12
COL4A3BP-201ENST00000261415 TRAV4A0A0B4J268 109 aa14.32□□□□□ -0.12
COL4A3BP-201ENST00000261415 NDUFA7O95182 113 aa14.32□□□□□ -0.12
COL4A3BP-201ENST00000261415 PLNP26678 52 aa14.32□□□□□ -0.12
COL4A3BP-201ENST00000261415 ANKRD29Q8N6D5 301 aa14.32□□□□□ -0.12
COL4A3BP-201ENST00000261415 PPDPFQ9H3Y8 114 aa14.32□□□□□ -0.12
COL4A3BP-201ENST00000261415 MDFICQ9P1T7 246 aa14.32□□□□□ -0.12
COL4A3BP-201ENST00000261415 TRBV12-3P01733 135 aa14.31□□□□□ -0.12
COL4A3BP-201ENST00000261415 LYZP61626 148 aa14.31□□□□□ -0.12
COL4A3BP-201ENST00000261415 ZNF491Q8N8L2 437 aa14.31□□□□□ -0.12
COL4A3BP-201ENST00000261415 TMEM213A2RRL7 107 aa14.31□□□□□ -0.12
COL4A3BP-201ENST00000261415 IGHV3-35A0A0C4DH35 117 aa14.3□□□□□ -0.12
COL4A3BP-201ENST00000261415 UBE2D1P51668 147 aa14.3□□□□□ -0.12
COL4A3BP-201ENST00000261415 ZFP2Q6ZN57 461 aa14.3□□□□□ -0.12
COL4A3BP-201ENST00000261415 TRAV8-2A0A0B4J237 113 aa14.3□□□□□ -0.12
COL4A3BP-201ENST00000261415 RNF125Q96EQ8 232 aa14.3□□□□□ -0.12
COL4A3BP-201ENST00000261415 UBE2E2Q96LR5 201 aa14.29□□□□□ -0.12
COL4A3BP-201ENST00000261415 MRPL35Q9NZE8 188 aaKnown RBP14.29□□□□□ -0.12
COL4A3BP-201ENST00000261415 TMEM14CQ9P0S9 112 aa14.28□□□□□ -0.12
COL4A3BP-201ENST00000261415 H3BVH4 76 aa14.27□□□□□ -0.12
COL4A3BP-201ENST00000261415 RASL10AQ92737 203 aa14.27□□□□□ -0.12
COL4A3BP-201ENST00000261415 CSDC2Q9Y534 153 aaKnown RBP14.27□□□□□ -0.12
COL4A3BP-201ENST00000261415 JMJD1CQ15652 2540 aa14.27□□□□□ -0.12
COL4A3BP-201ENST00000261415 TCL1BO95988 128 aa14.27□□□□□ -0.13
COL4A3BP-201ENST00000261415 ZFAND3Q9H8U3 227 aa14.27□□□□□ -0.13
COL4A3BP-201ENST00000261415 HIGD1AQ9Y241 93 aa14.27□□□□□ -0.13
COL4A3BP-201ENST00000261415 SMKR1H3BMG3 65 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms