RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 RPL39LQ96EH5 51 aaKnown RBP3.76□□□□□ -1.81
RC3H1-201ENST00000258349 LY6HO94772 140 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
RC3H1-201ENST00000258349 VSIG2Q96IQ7 327 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 COX7A2LO14548 114 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 CGB3P0DN86 165 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 NTN5Q8WTR8 489 aaPredicted RBP3.76□□□□□ -1.81
RC3H1-201ENST00000258349 PROK2Q9HC23 129 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 TRBV7-3A0A075B6L6 115 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 TRBV6-1A0A0K0K1D8 114 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 PIFOQ8TCI5 191 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 K7ENP7 123 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 MED14OSP0DP75 135 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 CXCL5P42830 114 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 DKK4Q9UBT3 224 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 RNF223E7ERA6 249 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 ZMAT4Q9H898 229 aa3.76□□□□□ -1.81
RC3H1-201ENST00000258349 SETD2Q9BYW2 2564 aaPredicted RBP3.76□□□□□ -1.81
RC3H1-201ENST00000258349 ZNF491Q8N8L2 437 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 C1orf43Q9BWL3 253 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 SND1-IT1Q9HBX3 110 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 ETDCA0A1B0GVM5 59 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 U3KQE9 123 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 COL4A3Q01955 1670 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 GNRH2O43555 120 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 C9orf47Q6ZRZ4 202 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 C11orf86A6NJI1 115 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 ASPHD1Q5U4P2 390 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 TMEM61Q8N0U2 210 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 JMJD7-PLA2G4BH0Y9G9 81 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 WFDC9Q8NEX5 89 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 LY6G6EA0A0G2JKS1 128 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 FOXI1Q12951 378 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 CDPF1Q6NVV7 123 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 U3KQA8 63 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 UBE2BP63146 152 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 DEFB105AQ8NG35 78 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 H3BT86 120 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 TRAV4A0A0B4J268 109 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 NDUFB1O75438 58 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 TIRAPP58753 221 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 Q96MF0 132 aa3.75□□□□□ -1.81
RC3H1-201ENST00000258349 CCL24O00175 119 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 BUB3O43684 328 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 C5orf47Q569G3 176 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 GYPEP15421 78 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 E9PLD3 99 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 ATP5EP2Q5VTU8 51 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
RC3H1-201ENST00000258349 UNQ6494/PRO21346Q6UXR6 183 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 IGHV1-58A0A0C4DH39 117 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 RSPO1Q2MKA7 263 aaPredicted RBP3.74□□□□□ -1.81
RC3H1-201ENST00000258349 TRBV10-2A0A0K0K1G8 114 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 A4D1N5 150 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 I3L2K1 104 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 ODF1Q14990 250 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 MUSTN1Q8IVN3 82 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 TIMM17AQ99595 171 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 NREPQ16612 68 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 C17orf77Q96MU5 243 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 SLX1AQ9BQ83 275 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 ZNF503-AS2A6NEH8 195 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 CGB7P0DN87 165 aa3.74□□□□□ -1.81
RC3H1-201ENST00000258349 IGKV2D-24A0A075B6R9 120 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 GTSF1Q8WW33 167 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 ZNF503Q96F45 646 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 AGPAT4-IT1Q9H0P7 198 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 NDUFV3P56181 108 aaKnown RBP3.73□□□□□ -1.81
RC3H1-201ENST00000258349 FAM167A-AS1Q96KT0 104 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 IGLV11-55A0A075B6I3 123 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 PROP1O75360 226 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 ANKRD11Q6UB99 2663 aaPredicted RBP3.73□□□□□ -1.81
RC3H1-201ENST00000258349 CRYGBP07316 175 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 FXYD2P54710 66 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 IGKV3D-7A0A0C4DH55 119 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 K7EIM0 57 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 TAX1BP3O14907 124 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 C16orf54Q6UWD8 224 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 MRPL23Q16540 153 aaKnown RBP3.73□□□□□ -1.81
RC3H1-201ENST00000258349 Q6ZQT7 251 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 HIST2H2BCQ6DN03 193 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 C11orf53Q8IXP5 236 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 MIAQ16674 131 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 TDRG1Q3Y452 100 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 HIGD2BQ4VC39 106 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 C9orf66Q5T8R8 295 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 NCOR2Q9Y618 2525 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 PRR30Q53SZ7 412 aaPredicted RBP3.73□□□□□ -1.81
RC3H1-201ENST00000258349 C4orf3Q8WVX3 66 aa3.73□□□□□ -1.81
RC3H1-201ENST00000258349 NDUFA1O15239 70 aa3.72□□□□□ -1.81
RC3H1-201ENST00000258349 RS1O15537 224 aa3.72□□□□□ -1.81
RC3H1-201ENST00000258349 CLPSL1A2RUU4 121 aa3.72□□□□□ -1.81
RC3H1-201ENST00000258349 MDFICQ9P1T7 246 aa3.72□□□□□ -1.81
RC3H1-201ENST00000258349 TRBV12-3P01733 135 aa3.72□□□□□ -1.81
RC3H1-201ENST00000258349 ARTNQ5T4W7 220 aa3.72□□□□□ -1.81
RC3H1-201ENST00000258349 CAMK2N2Q96S95 79 aa3.72□□□□□ -1.81
RC3H1-201ENST00000258349 Q6ZUT4 128 aa3.72□□□□□ -1.81
RC3H1-201ENST00000258349 NDUFA11Q86Y39 141 aa3.72□□□□□ -1.81
RC3H1-201ENST00000258349 C5orf56Q8N8D9 126 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms