RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 IFI27P40305 119 aaPredicted RBP11.04□□□□□ -0.64
HDHD3-201ENST00000238379 PYY3Q5JQD4 70 aa11.04□□□□□ -0.64
HDHD3-201ENST00000238379 NRACQ8N912 160 aa11.04□□□□□ -0.64
HDHD3-201ENST00000238379 PRSS3P2Q8NHM4 247 aa11.04□□□□□ -0.64
HDHD3-201ENST00000238379 A0A087WWL8 130 aa11.02□□□□□ -0.64
HDHD3-201ENST00000238379 M0R2P5 195 aa11.02□□□□□ -0.64
HDHD3-201ENST00000238379 CRYGDP07320 174 aa11.02□□□□□ -0.64
HDHD3-201ENST00000238379 MGPP08493 103 aa11.02□□□□□ -0.64
HDHD3-201ENST00000238379 SMIM17P0DL12 118 aa11.02□□□□□ -0.64
HDHD3-201ENST00000238379 Q6ZWC4 215 aa11.02□□□□□ -0.64
HDHD3-201ENST00000238379 PTH2Q96A98 100 aa11.02□□□□□ -0.64
HDHD3-201ENST00000238379 GOLT1BQ9Y3E0 138 aa11.02□□□□□ -0.64
HDHD3-201ENST00000238379 TRRAPQ9Y4A5 3859 aa11.02□□□□□ -0.65
HDHD3-201ENST00000238379 PIK3CD-AS1Q5SR53 167 aa11.02□□□□□ -0.65
HDHD3-201ENST00000238379 FA2HQ7L5A8 372 aa11.02□□□□□ -0.65
HDHD3-201ENST00000238379 SPXQ9BT56 116 aa11.02□□□□□ -0.65
HDHD3-201ENST00000238379 CSTL1Q9H114 145 aa11.02□□□□□ -0.65
HDHD3-201ENST00000238379 MAP1LC3AQ9H492 121 aa11.02□□□□□ -0.65
HDHD3-201ENST00000238379 AP5S1Q9NUS5 200 aa11.02□□□□□ -0.65
HDHD3-201ENST00000238379 IGHV1-24A0A0C4DH33 117 aa11.01□□□□□ -0.65
HDHD3-201ENST00000238379 PRSS47A8MTI9 375 aa11.01□□□□□ -0.65
HDHD3-201ENST00000238379 PMCHL1Q16048 86 aa11.01□□□□□ -0.65
HDHD3-201ENST00000238379 ZNF705AQ6ZN79 300 aaPredicted RBP11.01□□□□□ -0.65
HDHD3-201ENST00000238379 RNASE8Q8TDE3 154 aaKnown RBP11.01□□□□□ -0.65
HDHD3-201ENST00000238379 RASL10AQ92737 203 aa11.01□□□□□ -0.65
HDHD3-201ENST00000238379 C12orf57Q99622 126 aa11.01□□□□□ -0.65
HDHD3-201ENST00000238379 IL17DQ8TAD2 202 aa11□□□□□ -0.65
HDHD3-201ENST00000238379 JOSD1Q15040 202 aaPredicted RBP11□□□□□ -0.65
HDHD3-201ENST00000238379 OXLD1Q5BKU9 147 aa11□□□□□ -0.65
HDHD3-201ENST00000238379 FAM74A4Q5TZK3 123 aa11□□□□□ -0.65
HDHD3-201ENST00000238379 TMEM263Q8WUH6 116 aaKnown RBP11□□□□□ -0.65
HDHD3-201ENST00000238379 IGLV2-18A0A075B6J9 118 aa10.99□□□□□ -0.65
HDHD3-201ENST00000238379 LINC01546A6NGU7 62 aa10.99□□□□□ -0.65
HDHD3-201ENST00000238379 SUMO4Q6EEV6 95 aa10.98□□□□□ -0.65
HDHD3-201ENST00000238379 RPL39LQ96EH5 51 aaKnown RBP10.98□□□□□ -0.65
HDHD3-201ENST00000238379 NXT2Q9NPJ8 142 aaKnown RBP10.98□□□□□ -0.65
HDHD3-201ENST00000238379 PKD1L1Q8TDX9 2849 aa10.98□□□□□ -0.65
HDHD3-201ENST00000238379 F5H697 171 aa10.98□□□□□ -0.65
HDHD3-201ENST00000238379 Q8N8P6 123 aa10.98□□□□□ -0.65
HDHD3-201ENST00000238379 MRPL16Q9NX20 251 aaKnown RBP10.98□□□□□ -0.65
HDHD3-201ENST00000238379 A0A096LNJ9 63 aa10.97□□□□□ -0.65
HDHD3-201ENST00000238379 A8MWV9 139 aa10.97□□□□□ -0.65
HDHD3-201ENST00000238379 PPP1R17O96001 155 aa10.97□□□□□ -0.65
HDHD3-201ENST00000238379 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
HDHD3-201ENST00000238379 PLAC8L1A1L4L8 177 aa10.96□□□□□ -0.65
HDHD3-201ENST00000238379 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.65
HDHD3-201ENST00000238379 ZNF56Q15929 161 aa10.96□□□□□ -0.65
HDHD3-201ENST00000238379 UFSP1Q6NVU6 142 aa10.96□□□□□ -0.65
HDHD3-201ENST00000238379 CDPF1Q6NVV7 123 aa10.96□□□□□ -0.65
HDHD3-201ENST00000238379 NDUFAF3Q9BU61 184 aa10.96□□□□□ -0.65
HDHD3-201ENST00000238379 KIR2DL5BA0A0G2JN68 375 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 KIR2DL5BA0A0G2JPC4 375 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 M0QY20 66 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 CFAP126Q5VTH2 177 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 KIR2DL5AQ8N109 375 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 KIR2DL5BQ8NHK3 375 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 C16orf74Q96GX8 76 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 SMIM2Q9BVW6 85 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 KRTAP10-11P60412 298 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 KRTDAPP60985 99 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 EGFEM1PQ0D2K5 195 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 DAZ2Q13117 558 aaKnown RBP10.95□□□□□ -0.66
HDHD3-201ENST00000238379 RRN3P1Q2M238 152 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 NIT2Q9NQR4 276 aa10.95□□□□□ -0.66
HDHD3-201ENST00000238379 LEPROTL1O95214 131 aa10.94□□□□□ -0.66
HDHD3-201ENST00000238379 C3orf79P0CE67 100 aa10.94□□□□□ -0.66
HDHD3-201ENST00000238379 LINC00173Q6ZV60 143 aa10.94□□□□□ -0.66
HDHD3-201ENST00000238379 NACAE9PAV3 2078 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 RS1O15537 224 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 NOP10Q9NPE3 64 aaKnown RBP10.93□□□□□ -0.66
HDHD3-201ENST00000238379 TRGV1A0A0A0MS02 117 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 IGHV3-73A0A0B4J1V6 119 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 TRBV6-5A0A0K0K1A5 114 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 IGHV4-30-4P0DP06 118 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 APOC4P55056 127 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 LGALS9BQ3B8N2 356 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 Q8N976 141 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 EDA2RQ9HAV5 297 aa10.93□□□□□ -0.66
HDHD3-201ENST00000238379 SCGB1D1O95968 90 aa10.92□□□□□ -0.66
HDHD3-201ENST00000238379 HBDP02042 147 aa10.92□□□□□ -0.66
HDHD3-201ENST00000238379 POLR2KP53803 58 aaKnown RBP10.92□□□□□ -0.66
HDHD3-201ENST00000238379 RPL32P62910 135 aaKnown RBP10.92□□□□□ -0.66
HDHD3-201ENST00000238379 Q6ZTI0 123 aa10.92□□□□□ -0.66
HDHD3-201ENST00000238379 OVOL2Q9BRP0 275 aa10.92□□□□□ -0.66
HDHD3-201ENST00000238379 ST20Q9HBF5 79 aa10.92□□□□□ -0.66
HDHD3-201ENST00000238379 RHODO00212 210 aa10.91□□□□□ -0.66
HDHD3-201ENST00000238379 TCAPO15273 167 aa10.91□□□□□ -0.66
HDHD3-201ENST00000238379 FCER1GP30273 86 aa10.91□□□□□ -0.66
HDHD3-201ENST00000238379 TMEM70Q9BUB7 260 aa10.91□□□□□ -0.66
HDHD3-201ENST00000238379 HSPB8Q9UJY1 196 aa10.91□□□□□ -0.66
HDHD3-201ENST00000238379 X6R8D5 127 aa10.91□□□□□ -0.66
HDHD3-201ENST00000238379 NBEAL2Q6ZNJ1 2754 aa10.91□□□□□ -0.66
HDHD3-201ENST00000238379 BTF3P20290 206 aaKnown RBP10.91□□□□□ -0.66
HDHD3-201ENST00000238379 LAGE3Q14657 143 aa10.91□□□□□ -0.66
HDHD3-201ENST00000238379 Q6ZSN1 163 aa10.91□□□□□ -0.66
HDHD3-201ENST00000238379 ZFP2Q6ZN57 461 aa10.9□□□□□ -0.66
HDHD3-201ENST00000238379 SDHAF1A6NFY7 115 aa10.89□□□□□ -0.67
HDHD3-201ENST00000238379 SMIM9A6NGZ8 99 aa10.89□□□□□ -0.67
HDHD3-201ENST00000238379 H7C1H1 209 aa10.89□□□□□ -0.67
HDHD3-201ENST00000238379 K7EMI3 77 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms